EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000100379 (Gene tree)
Gene ID: 100005807
Gene Symbol: si:dkey-34d22.2
Alias: -
Full Name: si:dkey-34d22.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 3403 bases
Position: chr16:35379720-35383122
Accession: ZDB-GENE-131127-261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000135399	GTP_EFTU	PF00009.27	2.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000170497	-	1883	-	ENSDARP00000135399	183 (aa)	-	A0A0R4IID4

Gene Model

Click here to download ENSDARG00000100379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000100379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000100379	si:dkey-34d22.2	93	35.465	ENSDARG00000056479	rab1bb	85	35.465
ENSDARG00000100379	si:dkey-34d22.2	96	34.637	ENSDARG00000098344	rab18b	87	34.637
ENSDARG00000100379	si:dkey-34d22.2	90	35.329	ENSDARG00000041450	rab11a	77	35.329
ENSDARG00000100379	si:dkey-34d22.2	90	37.126	ENSDARG00000033056	zgc:171927	79	37.126
ENSDARG00000100379	si:dkey-34d22.2	93	30.460	ENSDARG00000045628	rab34a	72	30.460
ENSDARG00000100379	si:dkey-34d22.2	61	36.036	ENSDARG00000010844	kras	87	32.121
ENSDARG00000100379	si:dkey-34d22.2	90	34.731	ENSDARG00000090086	rab11bb	76	34.731
ENSDARG00000100379	si:dkey-34d22.2	93	36.047	ENSDARG00000029663	rab1ab	85	36.047
ENSDARG00000100379	si:dkey-34d22.2	92	30.387	ENSDARG00000046013	rasl11a	70	30.387
ENSDARG00000100379	si:dkey-34d22.2	98	34.973	ENSDARG00000102580	CU571310.1	86	34.973
ENSDARG00000100379	si:dkey-34d22.2	86	37.107	ENSDARG00000034522	rab6ba	75	37.107
ENSDARG00000100379	si:dkey-34d22.2	63	35.593	ENSDARG00000075285	si:ch73-116o1.2	79	33.533
ENSDARG00000100379	si:dkey-34d22.2	91	37.126	ENSDARG00000055291	rab18a	81	37.126
ENSDARG00000100379	si:dkey-34d22.2	98	39.011	ENSDARG00000020261	rab2a	85	39.011
ENSDARG00000100379	si:dkey-34d22.2	95	37.234	ENSDARG00000103391	rab9b	91	37.234
ENSDARG00000100379	si:dkey-34d22.2	92	33.721	ENSDARG00000026098	si:dkey-13a21.4	83	33.721
ENSDARG00000100379	si:dkey-34d22.2	93	32.184	ENSDARG00000014058	rab36	66	32.184
ENSDARG00000100379	si:dkey-34d22.2	90	35.329	ENSDARG00000041878	rab11ba	79	34.356
ENSDARG00000100379	si:dkey-34d22.2	62	41.228	ENSDARG00000005651	hrasb	100	33.333
ENSDARG00000100379	si:dkey-34d22.2	98	40.437	ENSDARG00000074246	rab14	84	40.437
ENSDARG00000100379	si:dkey-34d22.2	98	39.891	ENSDARG00000035188	rab14l	84	39.891
ENSDARG00000100379	si:dkey-34d22.2	88	41.420	ENSDARG00000045027	rab9a	82	41.420
ENSDARG00000100379	si:dkey-34d22.2	63	40.678	ENSDARG00000006553	rras	83	35.758
ENSDARG00000100379	si:dkey-34d22.2	88	34.146	ENSDARG00000052290	rab33ba	68	34.146
ENSDARG00000100379	si:dkey-34d22.2	85	37.975	ENSDARG00000037884	rab30	78	37.975
ENSDARG00000100379	si:dkey-34d22.2	91	35.294	ENSDARG00000089428	rab12	71	35.294
ENSDARG00000100379	si:dkey-34d22.2	87	35.404	ENSDARG00000114797	rab3b	73	36.025
ENSDARG00000100379	si:dkey-34d22.2	89	30.488	ENSDARG00000018602	rab5aa	75	30.488
ENSDARG00000100379	si:dkey-34d22.2	61	35.135	ENSDARG00000038225	nras	86	31.515
ENSDARG00000100379	si:dkey-34d22.2	90	33.735	ENSDARG00000058425	rab35b	81	33.735
ENSDARG00000100379	si:dkey-34d22.2	99	42.623	ENSDARG00000019312	rab39ba	86	42.623
ENSDARG00000100379	si:dkey-34d22.2	90	36.527	ENSDARG00000026484	rab15	77	36.527
ENSDARG00000100379	si:dkey-34d22.2	90	35.329	ENSDARG00000014340	rab11al	76	35.329
ENSDARG00000100379	si:dkey-34d22.2	87	34.545	ENSDARG00000087243	zgc:100918	80	34.545
ENSDARG00000100379	si:dkey-34d22.2	86	38.365	ENSDARG00000029885	rab41	74	38.365
ENSDARG00000100379	si:dkey-34d22.2	75	34.286	ENSDARG00000018107	rab3da	82	34.286
ENSDARG00000100379	si:dkey-34d22.2	88	34.356	ENSDARG00000102078	CABZ01072548.1	82	34.356
ENSDARG00000100379	si:dkey-34d22.2	86	37.736	ENSDARG00000103714	rab6a	75	37.736
ENSDARG00000100379	si:dkey-34d22.2	62	39.130	ENSDARG00000036252	rras2	80	32.530
ENSDARG00000100379	si:dkey-34d22.2	91	39.645	ENSDARG00000103934	megf8	97	39.645
ENSDARG00000100379	si:dkey-34d22.2	98	42.308	ENSDARG00000034215	rab42a	85	42.308
ENSDARG00000100379	si:dkey-34d22.2	61	36.036	ENSDARG00000013161	zgc:55558	87	32.121
ENSDARG00000100379	si:dkey-34d22.2	86	38.365	ENSDARG00000031343	rab6bb	75	38.365
ENSDARG00000100379	si:dkey-34d22.2	79	37.838	ENSDARG00000003257	zgc:101559	63	37.838
ENSDARG00000100379	si:dkey-34d22.2	99	43.169	ENSDARG00000036501	rab39bb	86	43.169
ENSDARG00000100379	si:dkey-34d22.2	93	34.091	ENSDARG00000020497	rab7a	85	34.091
ENSDARG00000100379	si:dkey-34d22.2	93	33.721	ENSDARG00000058800	rab25a	81	33.721
ENSDARG00000100379	si:dkey-34d22.2	89	39.394	ENSDARG00000034771	rab13	82	39.394
ENSDARG00000100379	si:dkey-34d22.2	91	34.706	ENSDARG00000037967	si:dkey-16l2.16	81	39.175
ENSDARG00000100379	si:dkey-34d22.2	84	33.544	ENSDARG00000062865	mras	84	33.544
ENSDARG00000100379	si:dkey-34d22.2	62	40.351	ENSDARG00000098497	hrasa	87	35.119
ENSDARG00000100379	si:dkey-34d22.2	90	32.530	ENSDARG00000015807	rab22a	84	32.530
ENSDARG00000100379	si:dkey-34d22.2	84	35.897	ENSDARG00000004151	rab23	69	34.132
ENSDARG00000100379	si:dkey-34d22.2	86	34.356	ENSDARG00000057394	rab33a	69	34.356
ENSDARG00000100379	si:dkey-34d22.2	93	35.465	ENSDARG00000052263	rab1aa	85	35.465
ENSDARG00000100379	si:dkey-34d22.2	87	33.939	ENSDARG00000021287	rab7b	80	33.939
ENSDARG00000100379	si:dkey-34d22.2	93	32.558	ENSDARG00000052954	rab25b	81	32.558
ENSDARG00000100379	si:dkey-34d22.2	50	36.957	ENSDARG00000099205	CABZ01081908.1	79	36.957
ENSDARG00000100379	si:dkey-34d22.2	93	34.884	ENSDARG00000058044	rab1ba	87	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000100379	si:dkey-34d22.2	99	47.568	ENSACIG00000016958	si:dkey-34d22.5	83	47.568	Amphilophus_citrinellus
ENSDARG00000100379	si:dkey-34d22.2	98	50.000	ENSATEG00000010784	si:dkey-34d22.5	71	50.000	Anabas_testudineus
ENSDARG00000100379	si:dkey-34d22.2	98	43.956	ENSCPBG00000011236	-	85	43.956	Chrysemys_picta_bellii
ENSDARG00000100379	si:dkey-34d22.2	98	48.370	ENSCSEG00000019183	si:dkey-34d22.5	83	48.370	Cynoglossus_semilaevis
ENSDARG00000100379	si:dkey-34d22.2	99	49.730	ENSCVAG00000017064	si:dkey-34d22.5	83	49.730	Cyprinodon_variegatus
ENSDARG00000100379	si:dkey-34d22.2	98	41.758	ENSFALG00000001373	-	85	41.758	Ficedula_albicollis
ENSDARG00000100379	si:dkey-34d22.2	99	49.730	ENSFHEG00000012041	si:dkey-34d22.5	83	49.730	Fundulus_heteroclitus
ENSDARG00000100379	si:dkey-34d22.2	98	43.407	ENSGALG00000000994	-	86	43.407	Gallus_gallus
ENSDARG00000100379	si:dkey-34d22.2	99	49.730	ENSGAFG00000008183	si:dkey-34d22.5	83	49.730	Gambusia_affinis
ENSDARG00000100379	si:dkey-34d22.2	95	42.614	ENSGAGG00000004918	-	87	42.614	Gopherus_agassizii
ENSDARG00000100379	si:dkey-34d22.2	98	49.457	ENSHCOG00000015692	si:dkey-34d22.5	85	49.457	Hippocampus_comes
ENSDARG00000100379	si:dkey-34d22.2	99	51.351	ENSKMAG00000012778	si:dkey-34d22.5	83	51.351	Kryptolebias_marmoratus
ENSDARG00000100379	si:dkey-34d22.2	98	49.457	ENSLBEG00000002926	si:dkey-34d22.5	83	49.457	Labrus_bergylta
ENSDARG00000100379	si:dkey-34d22.2	98	43.407	ENSLACG00000012674	si:dkey-34d22.5	87	43.407	Latimeria_chalumnae
ENSDARG00000100379	si:dkey-34d22.2	99	48.087	ENSLOCG00000003467	si:dkey-34d22.5	85	48.087	Lepisosteus_oculatus
ENSDARG00000100379	si:dkey-34d22.2	98	50.543	ENSMMOG00000006846	si:dkey-34d22.5	84	50.543	Mola_mola
ENSDARG00000100379	si:dkey-34d22.2	98	50.000	ENSMALG00000013152	si:dkey-34d22.5	83	50.000	Monopterus_albus
ENSDARG00000100379	si:dkey-34d22.2	99	52.198	ENSORLG00000014099	si:dkey-34d22.5	83	52.198	Oryzias_latipes
ENSDARG00000100379	si:dkey-34d22.2	99	52.198	ENSORLG00020020277	si:dkey-34d22.5	83	52.198	Oryzias_latipes_hni
ENSDARG00000100379	si:dkey-34d22.2	99	51.648	ENSORLG00015000142	si:dkey-34d22.5	83	51.648	Oryzias_latipes_hsok
ENSDARG00000100379	si:dkey-34d22.2	98	50.543	ENSOMEG00000017958	si:dkey-34d22.5	84	50.270	Oryzias_melastigma
ENSDARG00000100379	si:dkey-34d22.2	99	49.730	ENSPKIG00000021209	si:dkey-34d22.5	84	49.730	Paramormyrops_kingsleyae
ENSDARG00000100379	si:dkey-34d22.2	94	44.828	ENSPSIG00000006606	-	87	44.828	Pelodiscus_sinensis
ENSDARG00000100379	si:dkey-34d22.2	98	49.457	ENSPMGG00000001298	-	83	49.457	Periophthalmus_magnuspinnatus
ENSDARG00000100379	si:dkey-34d22.2	94	44.253	ENSPCIG00000022399	-	79	44.253	Phascolarctos_cinereus
ENSDARG00000100379	si:dkey-34d22.2	99	49.189	ENSPFOG00000014499	si:dkey-34d22.5	83	49.189	Poecilia_formosa
ENSDARG00000100379	si:dkey-34d22.2	99	49.189	ENSPLAG00000007773	si:dkey-34d22.5	83	49.189	Poecilia_latipinna
ENSDARG00000100379	si:dkey-34d22.2	99	49.189	ENSPMEG00000012932	si:dkey-34d22.5	83	49.189	Poecilia_mexicana
ENSDARG00000100379	si:dkey-34d22.2	94	44.253	ENSSHAG00000008520	-	79	44.253	Sarcophilus_harrisii
ENSDARG00000100379	si:dkey-34d22.2	98	47.826	ENSSFOG00015012088	rab42	83	47.826	Scleropages_formosus
ENSDARG00000100379	si:dkey-34d22.2	98	50.000	ENSSLDG00000002646	si:dkey-34d22.5	83	50.000	Seriola_lalandi_dorsalis
ENSDARG00000100379	si:dkey-34d22.2	98	50.000	ENSSPAG00000012955	si:dkey-34d22.5	83	50.000	Stegastes_partitus
ENSDARG00000100379	si:dkey-34d22.2	92	40.462	ENSXETG00000020622	rab39a	83	40.462	Xenopus_tropicalis
ENSDARG00000100379	si:dkey-34d22.2	99	48.649	ENSXCOG00000008410	si:dkey-34d22.5	83	48.649	Xiphophorus_couchianus
ENSDARG00000100379	si:dkey-34d22.2	99	48.649	ENSXMAG00000029317	si:dkey-34d22.5	83	48.649	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process