EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000100452 (Gene tree)
Gene ID: 322404
Gene Symbol: nop53
Alias: fb60b03|gltscr2|wu:fb60b03|zgc:123178
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 13908 bases
Position: chr15:6652396-6666303
Accession: ZDB-GENE-051120-21
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000131696	Nop53	PF07767.11	1e-94	1	1
ENSDARP00000145727	Nop53	PF07767.11	1.1e-94	1	1
ENSDARP00000131802	Nop53	PF07767.11	2.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000157678	-	1484	-	ENSDARP00000131696	457 (aa)	-	A0A0R4IEI5
ENSDART00000192813	-	1595	-	ENSDARP00000145727	473 (aa)	-	A0A2R8Q037
ENSDART00000160136	-	635	-	ENSDARP00000131802	180 (aa)	-	A0A0R4ICW5

Gene Model

Click here to download ENSDARG00000100452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000100452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000100452	nop53	100	55.080	ENSG00000105373	NOP53	99	75.000	Homo_sapiens
ENSDARG00000100452	nop53	99	66.111	ENSAPOG00000006446	nop53	99	64.579	Acanthochromis_polyacanthus
ENSDARG00000100452	nop53	100	46.305	ENSAMEG00000015214	NOP53	88	47.427	Ailuropoda_melanoleuca
ENSDARG00000100452	nop53	86	68.387	ENSACIG00000002467	nop53	99	62.682	Amphilophus_citrinellus
ENSDARG00000100452	nop53	99	66.667	ENSAOCG00000007002	nop53	99	64.935	Amphiprion_ocellaris
ENSDARG00000100452	nop53	99	66.667	ENSAPEG00000024564	nop53	99	65.227	Amphiprion_percula
ENSDARG00000100452	nop53	96	63.252	ENSATEG00000021860	nop53	100	63.778	Anabas_testudineus
ENSDARG00000100452	nop53	99	57.068	ENSACAG00000011362	-	93	56.985	Anolis_carolinensis
ENSDARG00000100452	nop53	100	54.011	ENSANAG00000007933	NOP53	92	48.694	Aotus_nancymaae
ENSDARG00000100452	nop53	99	63.034	ENSACLG00000011832	nop53	99	63.871	Astatotilapia_calliptera
ENSDARG00000100452	nop53	100	68.280	ENSAMXG00000014883	nop53	100	67.888	Astyanax_mexicanus
ENSDARG00000100452	nop53	100	52.850	ENSBTAG00000021192	NOP53	80	51.276	Bos_taurus
ENSDARG00000100452	nop53	100	53.093	ENSCJAG00000011385	NOP53	99	48.958	Callithrix_jacchus
ENSDARG00000100452	nop53	99	51.795	ENSCAFG00000004080	NOP53	88	50.577	Canis_familiaris
ENSDARG00000100452	nop53	100	53.968	ENSCHIG00000009393	NOP53	88	51.756	Capra_hircus
ENSDARG00000100452	nop53	100	42.553	ENSTSYG00000036631	NOP53	86	45.305	Carlito_syrichta
ENSDARG00000100452	nop53	100	51.323	ENSCAPG00000013148	NOP53	100	50.623	Cavia_aperea
ENSDARG00000100452	nop53	100	50.794	ENSCPOG00000015665	NOP53	88	51.059	Cavia_porcellus
ENSDARG00000100452	nop53	100	54.545	ENSCCAG00000025477	NOP53	88	52.471	Cebus_capucinus
ENSDARG00000100452	nop53	100	55.080	ENSCATG00000032842	NOP53	88	52.594	Cercocebus_atys
ENSDARG00000100452	nop53	100	50.000	ENSCLAG00000001860	NOP53	88	49.417	Chinchilla_lanigera
ENSDARG00000100452	nop53	100	55.080	ENSCSAG00000002928	NOP53	88	52.123	Chlorocebus_sabaeus
ENSDARG00000100452	nop53	99	55.676	ENSCPBG00000009047	NOP53	94	53.616	Chrysemys_picta_bellii
ENSDARG00000100452	nop53	100	40.110	ENSCING00000021395	-	96	34.353	Ciona_intestinalis
ENSDARG00000100452	nop53	100	40.984	ENSCSAVG00000006009	-	96	34.742	Ciona_savignyi
ENSDARG00000100452	nop53	100	55.615	ENSCANG00000039648	NOP53	87	49.161	Colobus_angolensis_palliatus
ENSDARG00000100452	nop53	100	53.927	ENSCGRG00001019033	Nop53	88	51.991	Cricetulus_griseus_chok1gshd
ENSDARG00000100452	nop53	99	63.128	ENSCSEG00000014834	nop53	99	57.113	Cynoglossus_semilaevis
ENSDARG00000100452	nop53	99	65.032	ENSCVAG00000005940	nop53	99	65.885	Cyprinodon_variegatus
ENSDARG00000100452	nop53	100	55.080	ENSDNOG00000005165	NOP53	79	51.537	Dasypus_novemcinctus
ENSDARG00000100452	nop53	99	50.785	ENSETEG00000003679	-	57	50.226	Echinops_telfairi
ENSDARG00000100452	nop53	99	42.541	ENSEBUG00000012747	nop53	89	44.630	Eptatretus_burgeri
ENSDARG00000100452	nop53	97	48.401	ENSEASG00005004345	NOP53	84	50.467	Equus_asinus_asinus
ENSDARG00000100452	nop53	100	50.000	ENSECAG00000026850	NOP53	84	49.654	Equus_caballus
ENSDARG00000100452	nop53	83	76.562	ENSEEUG00000005287	NOP53	73	76.562	Erinaceus_europaeus
ENSDARG00000100452	nop53	99	65.435	ENSELUG00000001525	nop53	99	65.435	Esox_lucius
ENSDARG00000100452	nop53	100	51.031	ENSFCAG00000010861	NOP53	88	50.000	Felis_catus
ENSDARG00000100452	nop53	94	45.402	ENSFDAG00000010478	NOP53	86	45.694	Fukomys_damarensis
ENSDARG00000100452	nop53	99	67.222	ENSFHEG00000017763	nop53	97	66.022	Fundulus_heteroclitus
ENSDARG00000100452	nop53	99	60.335	ENSGMOG00000014299	nop53	99	56.674	Gadus_morhua
ENSDARG00000100452	nop53	91	50.455	ENSGALG00000039473	NOP53	70	51.294	Gallus_gallus
ENSDARG00000100452	nop53	99	61.996	ENSGAFG00000013301	nop53	98	62.179	Gambusia_affinis
ENSDARG00000100452	nop53	99	60.894	ENSGACG00000005766	nop53	99	60.173	Gasterosteus_aculeatus
ENSDARG00000100452	nop53	86	53.125	ENSGGOG00000024728	-	87	47.393	Gorilla_gorilla
ENSDARG00000100452	nop53	100	55.080	ENSGGOG00000005462	NOP53	88	49.881	Gorilla_gorilla
ENSDARG00000100452	nop53	99	63.034	ENSHBUG00000023625	nop53	99	63.871	Haplochromis_burtoni
ENSDARG00000100452	nop53	100	49.474	ENSHGLG00000018240	NOP53	88	49.057	Heterocephalus_glaber_female
ENSDARG00000100452	nop53	72	61.404	ENSHGLG00100015613	NOP53	85	61.404	Heterocephalus_glaber_male
ENSDARG00000100452	nop53	92	65.663	ENSHCOG00000017133	nop53	99	60.291	Hippocampus_comes
ENSDARG00000100452	nop53	100	71.242	ENSIPUG00000008154	nop53	89	71.242	Ictalurus_punctatus
ENSDARG00000100452	nop53	99	52.688	ENSSTOG00000022092	NOP53	88	51.300	Ictidomys_tridecemlineatus
ENSDARG00000100452	nop53	100	52.632	ENSJJAG00000007854	Nop53	88	50.585	Jaculus_jaculus
ENSDARG00000100452	nop53	96	64.523	ENSKMAG00000020756	nop53	100	65.632	Kryptolebias_marmoratus
ENSDARG00000100452	nop53	99	62.570	ENSLBEG00000011432	nop53	99	62.174	Labrus_bergylta
ENSDARG00000100452	nop53	100	59.893	ENSLACG00000018320	NOP53	99	55.802	Latimeria_chalumnae
ENSDARG00000100452	nop53	99	60.870	ENSLOCG00000014178	nop53	99	60.870	Lepisosteus_oculatus
ENSDARG00000100452	nop53	100	55.080	ENSMFAG00000045103	NOP53	88	52.123	Macaca_fascicularis
ENSDARG00000100452	nop53	100	55.080	ENSMMUG00000013348	NOP53	99	74.118	Macaca_mulatta
ENSDARG00000100452	nop53	100	55.080	ENSMNEG00000042540	NOP53	84	52.123	Macaca_nemestrina
ENSDARG00000100452	nop53	99	47.368	ENSMLEG00000032475	NOP53	88	46.028	Mandrillus_leucophaeus
ENSDARG00000100452	nop53	99	64.530	ENSMAMG00000012652	nop53	99	64.316	Mastacembelus_armatus
ENSDARG00000100452	nop53	99	61.957	ENSMZEG00005005033	nop53	99	61.438	Maylandia_zebra
ENSDARG00000100452	nop53	100	53.439	ENSMAUG00000012617	Nop53	88	51.537	Mesocricetus_auratus
ENSDARG00000100452	nop53	100	52.128	ENSMICG00000005580	NOP53	93	50.585	Microcebus_murinus
ENSDARG00000100452	nop53	100	53.723	ENSMOCG00000008367	Nop53	88	53.176	Microtus_ochrogaster
ENSDARG00000100452	nop53	99	64.286	ENSMMOG00000006515	nop53	99	64.719	Mola_mola
ENSDARG00000100452	nop53	100	57.143	ENSMODG00000008721	NOP53	81	52.415	Monodelphis_domestica
ENSDARG00000100452	nop53	99	67.598	ENSMALG00000020350	nop53	96	66.450	Monopterus_albus
ENSDARG00000100452	nop53	100	51.813	MGP_CAROLIEiJ_G0029218	Nop53	99	51.613	Mus_caroli
ENSDARG00000100452	nop53	100	51.813	ENSMUSG00000041560	Nop53	88	51.860	Mus_musculus
ENSDARG00000100452	nop53	100	51.813	MGP_PahariEiJ_G0021074	-	99	51.613	Mus_pahari
ENSDARG00000100452	nop53	100	51.813	MGP_SPRETEiJ_G0030298	Nop53	99	51.613	Mus_spretus
ENSDARG00000100452	nop53	100	50.000	ENSMPUG00000004456	NOP53	88	50.463	Mustela_putorius_furo
ENSDARG00000100452	nop53	100	51.010	ENSMLUG00000027066	-	99	51.311	Myotis_lucifugus
ENSDARG00000100452	nop53	100	52.973	ENSNGAG00000019894	Nop53	88	49.650	Nannospalax_galili
ENSDARG00000100452	nop53	95	57.466	ENSNBRG00000002057	nop53	93	58.314	Neolamprologus_brichardi
ENSDARG00000100452	nop53	92	41.420	ENSNLEG00000028326	-	83	43.143	Nomascus_leucogenys
ENSDARG00000100452	nop53	100	55.080	ENSNLEG00000003143	NOP53	88	52.358	Nomascus_leucogenys
ENSDARG00000100452	nop53	82	45.946	ENSMEUG00000002525	-	99	42.105	Notamacropus_eugenii
ENSDARG00000100452	nop53	100	46.465	ENSODEG00000006707	NOP53	88	49.065	Octodon_degus
ENSDARG00000100452	nop53	99	63.948	ENSONIG00000016624	nop53	99	63.948	Oreochromis_niloticus
ENSDARG00000100452	nop53	99	63.043	ENSORLG00000008659	nop53	99	63.043	Oryzias_latipes
ENSDARG00000100452	nop53	98	62.712	ENSORLG00020019916	nop53	99	59.408	Oryzias_latipes_hni
ENSDARG00000100452	nop53	99	63.226	ENSORLG00015001315	nop53	99	63.871	Oryzias_latipes_hsok
ENSDARG00000100452	nop53	99	65.556	ENSOMEG00000018244	nop53	99	64.163	Oryzias_melastigma
ENSDARG00000100452	nop53	89	42.041	ENSOGAG00000024300	NOP53	78	75.000	Otolemur_garnettii
ENSDARG00000100452	nop53	88	40.046	ENSOARG00000011414	NOP53	87	40.046	Ovis_aries
ENSDARG00000100452	nop53	99	50.000	ENSPPAG00000029337	-	87	46.445	Pan_paniscus
ENSDARG00000100452	nop53	100	50.802	ENSPPAG00000032995	-	86	44.869	Pan_paniscus
ENSDARG00000100452	nop53	100	50.802	ENSPPAG00000002927	-	88	50.472	Pan_paniscus
ENSDARG00000100452	nop53	100	51.031	ENSPPRG00000008954	NOP53	88	50.000	Panthera_pardus
ENSDARG00000100452	nop53	99	49.468	ENSPTRG00000052493	-	87	46.209	Pan_troglodytes
ENSDARG00000100452	nop53	99	54.301	ENSPTRG00000043520	-	88	49.764	Pan_troglodytes
ENSDARG00000100452	nop53	100	55.080	ENSPTRG00000011215	NOP53	88	52.358	Pan_troglodytes
ENSDARG00000100452	nop53	100	55.080	ENSPANG00000002964	NOP53	88	52.123	Papio_anubis
ENSDARG00000100452	nop53	99	62.570	ENSPKIG00000000127	nop53	99	62.061	Paramormyrops_kingsleyae
ENSDARG00000100452	nop53	99	64.706	ENSPMGG00000021579	nop53	99	64.731	Periophthalmus_magnuspinnatus
ENSDARG00000100452	nop53	100	52.356	ENSPEMG00000006856	Nop53	88	52.103	Peromyscus_maniculatus_bairdii
ENSDARG00000100452	nop53	50	42.857	ENSPMAG00000001501	-	88	45.188	Petromyzon_marinus
ENSDARG00000100452	nop53	77	51.449	ENSPMAG00000009638	-	82	58.879	Petromyzon_marinus
ENSDARG00000100452	nop53	100	52.459	ENSPCIG00000016718	NOP53	89	49.292	Phascolarctos_cinereus
ENSDARG00000100452	nop53	99	62.420	ENSPFOG00000002839	nop53	99	62.420	Poecilia_formosa
ENSDARG00000100452	nop53	99	62.208	ENSPLAG00000006675	nop53	99	62.208	Poecilia_latipinna
ENSDARG00000100452	nop53	61	61.856	ENSPLAG00000009285	-	89	62.284	Poecilia_latipinna
ENSDARG00000100452	nop53	61	62.199	ENSPMEG00000006978	nop53	89	62.630	Poecilia_mexicana
ENSDARG00000100452	nop53	99	62.983	ENSPMEG00000009589	nop53	99	63.113	Poecilia_mexicana
ENSDARG00000100452	nop53	99	59.519	ENSPREG00000008711	nop53	99	59.348	Poecilia_reticulata
ENSDARG00000100452	nop53	100	45.989	ENSPPYG00000010181	NOP53	87	48.349	Pongo_abelii
ENSDARG00000100452	nop53	100	52.941	ENSPCAG00000007692	NOP53	89	47.765	Procavia_capensis
ENSDARG00000100452	nop53	73	62.281	ENSPCOG00000016124	NOP53	86	43.614	Propithecus_coquereli
ENSDARG00000100452	nop53	100	48.223	ENSPVAG00000014671	NOP53	72	50.000	Pteropus_vampyrus
ENSDARG00000100452	nop53	99	63.034	ENSPNYG00000001341	nop53	99	63.871	Pundamilia_nyererei
ENSDARG00000100452	nop53	100	72.826	ENSPNAG00000012520	nop53	100	72.826	Pygocentrus_nattereri
ENSDARG00000100452	nop53	100	53.927	ENSRNOG00000013023	Nop53	88	52.336	Rattus_norvegicus
ENSDARG00000100452	nop53	100	55.080	ENSRBIG00000036427	NOP53	88	52.123	Rhinopithecus_bieti
ENSDARG00000100452	nop53	100	55.080	ENSRROG00000042298	NOP53	88	52.123	Rhinopithecus_roxellana
ENSDARG00000100452	nop53	100	53.723	ENSSBOG00000033115	NOP53	87	52.000	Saimiri_boliviensis_boliviensis
ENSDARG00000100452	nop53	99	53.846	ENSSHAG00000002239	NOP53	99	50.856	Sarcophilus_harrisii
ENSDARG00000100452	nop53	99	65.922	ENSSFOG00015007062	gltscr2	99	63.676	Scleropages_formosus
ENSDARG00000100452	nop53	99	64.088	ENSSMAG00000000212	nop53	99	62.741	Scophthalmus_maximus
ENSDARG00000100452	nop53	99	67.598	ENSSDUG00000010575	nop53	99	66.667	Seriola_dumerili
ENSDARG00000100452	nop53	99	68.156	ENSSLDG00000000140	nop53	97	67.467	Seriola_lalandi_dorsalis
ENSDARG00000100452	nop53	99	49.457	ENSSARG00000014109	NOP53	72	47.839	Sorex_araneus
ENSDARG00000100452	nop53	99	56.085	ENSSPUG00000004420	NOP53	87	44.096	Sphenodon_punctatus
ENSDARG00000100452	nop53	99	67.033	ENSSPAG00000000318	nop53	99	64.316	Stegastes_partitus
ENSDARG00000100452	nop53	100	51.596	ENSSSCG00000022774	NOP53	88	49.644	Sus_scrofa
ENSDARG00000100452	nop53	99	67.778	ENSTRUG00000004944	nop53	99	63.617	Takifugu_rubripes
ENSDARG00000100452	nop53	54	63.492	ENSTNIG00000014330	nop53	95	63.492	Tetraodon_nigroviridis
ENSDARG00000100452	nop53	65	62.500	ENSTBEG00000008708	NOP53	64	62.500	Tupaia_belangeri
ENSDARG00000100452	nop53	100	50.000	ENSTTRG00000011831	NOP53	88	50.808	Tursiops_truncatus
ENSDARG00000100452	nop53	100	45.361	ENSUAMG00000028254	NOP53	88	48.843	Ursus_americanus
ENSDARG00000100452	nop53	67	46.246	ENSVVUG00000023365	NOP53	66	46.246	Vulpes_vulpes
ENSDARG00000100452	nop53	99	53.631	ENSXETG00000002782	nop53	90	51.683	Xenopus_tropicalis
ENSDARG00000100452	nop53	99	65.217	ENSXCOG00000004436	nop53	99	65.217	Xiphophorus_couchianus
ENSDARG00000100452	nop53	99	64.444	ENSXMAG00000002589	nop53	99	63.539	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0008097	5S rRNA binding	21873635.	IBA	Function
GO:0042254	ribosome biogenesis	-	IEA	Process