EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000100612 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-163c2.1
Alias: -
Full Name: si:ch211-163c2.1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 33756 bases
Position: chr7:7988986-8022741
Accession: ZDB-GENE-160114-75
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000142362	PARP	PF00644.20	9.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000172841	-	5502	XM_017356962	ENSDARP00000142362	1315 (aa)	XP_017212451	A0A140LGI3

Gene Model

Click here to download ENSDARG00000100612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000100612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000100612	si:ch211-163c2.1	99	81.708	ENSDARG00000099377	si:cabz01030277.1	100	90.894
ENSDARG00000100612	si:ch211-163c2.1	84	71.107	ENSDARG00000105415	si:ch211-163c2.1	100	87.041
ENSDARG00000100612	si:ch211-163c2.1	89	30.679	ENSDARG00000040445	si:ch211-219a4.3	99	33.080

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000100612	si:ch211-163c2.1	58	30.165	ENSACIG00000003944	si:ch211-219a4.3	84	44.500	Amphilophus_citrinellus
ENSDARG00000100612	si:ch211-163c2.1	74	49.296	ENSACIG00000004115	si:ch211-219a4.3	50	49.296	Amphilophus_citrinellus
ENSDARG00000100612	si:ch211-163c2.1	53	45.874	ENSAPEG00000003700	-	93	45.874	Amphiprion_percula
ENSDARG00000100612	si:ch211-163c2.1	99	33.533	ENSAPEG00000001687	-	97	50.510	Amphiprion_percula
ENSDARG00000100612	si:ch211-163c2.1	97	34.065	ENSATEG00000011611	-	92	34.065	Anabas_testudineus
ENSDARG00000100612	si:ch211-163c2.1	59	48.371	ENSATEG00000002587	-	89	48.747	Anabas_testudineus
ENSDARG00000100612	si:ch211-163c2.1	66	49.373	ENSATEG00000002592	-	94	49.373	Anabas_testudineus
ENSDARG00000100612	si:ch211-163c2.1	73	30.303	ENSAPLG00000010062	-	67	30.303	Anas_platyrhynchos
ENSDARG00000100612	si:ch211-163c2.1	50	48.158	ENSACLG00000013204	-	90	49.474	Astatotilapia_calliptera
ENSDARG00000100612	si:ch211-163c2.1	96	33.060	ENSACLG00000001129	-	97	45.405	Astatotilapia_calliptera
ENSDARG00000100612	si:ch211-163c2.1	99	40.015	ENSACLG00000013074	-	100	40.434	Astatotilapia_calliptera
ENSDARG00000100612	si:ch211-163c2.1	94	57.105	ENSAMXG00000035876	si:cabz01030277.1	95	57.105	Astyanax_mexicanus
ENSDARG00000100612	si:ch211-163c2.1	93	30.711	ENSBTAG00000016656	PARP14	81	46.766	Bos_taurus
ENSDARG00000100612	si:ch211-163c2.1	93	30.856	ENSCHIG00000018391	PARP14	80	30.856	Capra_hircus
ENSDARG00000100612	si:ch211-163c2.1	88	31.004	ENSTSYG00000005576	PARP14	75	31.004	Carlito_syrichta
ENSDARG00000100612	si:ch211-163c2.1	58	30.635	ENSCAPG00000016922	PARP14	60	30.635	Cavia_aperea
ENSDARG00000100612	si:ch211-163c2.1	60	30.580	ENSCPOG00000020020	PARP14	60	30.580	Cavia_porcellus
ENSDARG00000100612	si:ch211-163c2.1	88	30.751	ENSCPBG00000013912	-	72	30.751	Chrysemys_picta_bellii
ENSDARG00000100612	si:ch211-163c2.1	68	30.359	ENSCPBG00000013908	-	60	30.359	Chrysemys_picta_bellii
ENSDARG00000100612	si:ch211-163c2.1	92	42.139	ENSCVAG00000014299	-	98	41.815	Cyprinodon_variegatus
ENSDARG00000100612	si:ch211-163c2.1	96	32.855	ENSCVAG00000017536	-	92	32.936	Cyprinodon_variegatus
ENSDARG00000100612	si:ch211-163c2.1	84	30.797	ENSETEG00000002790	PARP14	54	30.797	Echinops_telfairi
ENSDARG00000100612	si:ch211-163c2.1	89	30.429	ENSEASG00005016553	PARP14	77	30.429	Equus_asinus_asinus
ENSDARG00000100612	si:ch211-163c2.1	89	30.085	ENSECAG00000024988	PARP14	77	30.085	Equus_caballus
ENSDARG00000100612	si:ch211-163c2.1	99	34.058	ENSELUG00000007568	-	96	34.058	Esox_lucius
ENSDARG00000100612	si:ch211-163c2.1	68	42.553	ENSELUG00000009798	si:ch211-219a4.3	67	42.553	Esox_lucius
ENSDARG00000100612	si:ch211-163c2.1	96	32.173	ENSFHEG00000008557	-	99	33.984	Fundulus_heteroclitus
ENSDARG00000100612	si:ch211-163c2.1	88	30.210	ENSGMOG00000011231	-	98	41.333	Gadus_morhua
ENSDARG00000100612	si:ch211-163c2.1	97	34.217	ENSGAFG00000001814	-	92	34.217	Gambusia_affinis
ENSDARG00000100612	si:ch211-163c2.1	52	30.337	ENSGAFG00000009879	si:ch211-219a4.3	99	30.337	Gambusia_affinis
ENSDARG00000100612	si:ch211-163c2.1	61	30.224	ENSGACG00000002353	si:ch211-219a4.3	94	45.000	Gasterosteus_aculeatus
ENSDARG00000100612	si:ch211-163c2.1	60	33.702	ENSGACG00000018943	-	94	33.702	Gasterosteus_aculeatus
ENSDARG00000100612	si:ch211-163c2.1	96	33.294	ENSHBUG00000018235	-	97	49.239	Haplochromis_burtoni
ENSDARG00000100612	si:ch211-163c2.1	99	46.792	ENSIPUG00000008165	si:cabz01030277.1	96	46.606	Ictalurus_punctatus
ENSDARG00000100612	si:ch211-163c2.1	60	30.731	ENSSTOG00000019423	PARP14	54	30.731	Ictidomys_tridecemlineatus
ENSDARG00000100612	si:ch211-163c2.1	97	32.692	ENSKMAG00000016827	-	87	47.000	Kryptolebias_marmoratus
ENSDARG00000100612	si:ch211-163c2.1	79	30.893	ENSKMAG00000019118	si:ch211-219a4.3	66	31.164	Kryptolebias_marmoratus
ENSDARG00000100612	si:ch211-163c2.1	67	52.419	ENSKMAG00000000939	-	94	52.419	Kryptolebias_marmoratus
ENSDARG00000100612	si:ch211-163c2.1	60	30.778	ENSLBEG00000025830	si:ch211-219a4.3	61	30.778	Labrus_bergylta
ENSDARG00000100612	si:ch211-163c2.1	68	48.990	ENSLOCG00000003430	si:ch211-219a4.3	62	48.990	Lepisosteus_oculatus
ENSDARG00000100612	si:ch211-163c2.1	68	41.912	ENSLOCG00000000239	si:cabz01030277.1	100	41.912	Lepisosteus_oculatus
ENSDARG00000100612	si:ch211-163c2.1	60	30.420	ENSLOCG00000001612	-	56	30.420	Lepisosteus_oculatus
ENSDARG00000100612	si:ch211-163c2.1	99	36.506	ENSLOCG00000000942	-	96	36.506	Lepisosteus_oculatus
ENSDARG00000100612	si:ch211-163c2.1	99	43.331	ENSMAMG00000014821	si:cabz01030277.1	96	42.889	Mastacembelus_armatus
ENSDARG00000100612	si:ch211-163c2.1	99	33.213	ENSMAMG00000012368	-	96	33.213	Mastacembelus_armatus
ENSDARG00000100612	si:ch211-163c2.1	53	38.889	ENSMZEG00005025708	-	97	38.889	Maylandia_zebra
ENSDARG00000100612	si:ch211-163c2.1	96	33.060	ENSMZEG00005020476	-	92	33.060	Maylandia_zebra
ENSDARG00000100612	si:ch211-163c2.1	96	43.191	ENSMZEG00005021082	-	99	43.258	Maylandia_zebra
ENSDARG00000100612	si:ch211-163c2.1	88	30.168	ENSMICG00000049225	PARP14	72	30.155	Microcebus_murinus
ENSDARG00000100612	si:ch211-163c2.1	88	41.397	ENSMALG00000015837	-	99	41.141	Monopterus_albus
ENSDARG00000100612	si:ch211-163c2.1	93	30.545	MGP_CAROLIEiJ_G0020706	Parp14	80	30.545	Mus_caroli
ENSDARG00000100612	si:ch211-163c2.1	93	30.545	ENSMUSG00000034422	Parp14	80	30.545	Mus_musculus
ENSDARG00000100612	si:ch211-163c2.1	93	30.330	MGP_PahariEiJ_G0016409	Parp14	80	30.457	Mus_pahari
ENSDARG00000100612	si:ch211-163c2.1	92	30.292	MGP_SPRETEiJ_G0021604	Parp14	80	30.292	Mus_spretus
ENSDARG00000100612	si:ch211-163c2.1	92	30.477	ENSMLUG00000030765	-	79	30.477	Myotis_lucifugus
ENSDARG00000100612	si:ch211-163c2.1	90	30.498	ENSMLUG00000008047	-	83	30.498	Myotis_lucifugus
ENSDARG00000100612	si:ch211-163c2.1	92	30.504	ENSMLUG00000023256	-	79	30.504	Myotis_lucifugus
ENSDARG00000100612	si:ch211-163c2.1	92	30.583	ENSMLUG00000022755	-	92	30.583	Myotis_lucifugus
ENSDARG00000100612	si:ch211-163c2.1	84	31.307	ENSNGAG00000024058	Parp14	66	31.307	Nannospalax_galili
ENSDARG00000100612	si:ch211-163c2.1	88	30.206	ENSODEG00000008430	PARP14	75	30.206	Octodon_degus
ENSDARG00000100612	si:ch211-163c2.1	56	32.947	ENSONIG00000007870	-	98	34.132	Oreochromis_niloticus
ENSDARG00000100612	si:ch211-163c2.1	53	45.152	ENSONIG00000012986	-	99	45.845	Oreochromis_niloticus
ENSDARG00000100612	si:ch211-163c2.1	99	40.520	ENSORLG00020005938	-	96	40.892	Oryzias_latipes_hni
ENSDARG00000100612	si:ch211-163c2.1	52	31.799	ENSORLG00015021971	si:ch211-219a4.3	91	45.685	Oryzias_latipes_hsok
ENSDARG00000100612	si:ch211-163c2.1	96	33.174	ENSOMEG00000022143	-	97	33.254	Oryzias_melastigma
ENSDARG00000100612	si:ch211-163c2.1	85	32.570	ENSOMEG00000019715	si:ch211-219a4.3	93	45.178	Oryzias_melastigma
ENSDARG00000100612	si:ch211-163c2.1	87	30.982	ENSOARG00000020160	PARP14	80	30.982	Ovis_aries
ENSDARG00000100612	si:ch211-163c2.1	99	35.833	ENSPKIG00000022431	-	96	35.833	Paramormyrops_kingsleyae
ENSDARG00000100612	si:ch211-163c2.1	52	31.207	ENSPKIG00000004027	-	99	31.207	Paramormyrops_kingsleyae
ENSDARG00000100612	si:ch211-163c2.1	73	30.440	ENSPSIG00000003516	PARP14	64	30.594	Pelodiscus_sinensis
ENSDARG00000100612	si:ch211-163c2.1	92	30.413	ENSPEMG00000008286	Parp14	79	30.413	Peromyscus_maniculatus_bairdii
ENSDARG00000100612	si:ch211-163c2.1	52	36.156	ENSPMAG00000002848	-	65	36.156	Petromyzon_marinus
ENSDARG00000100612	si:ch211-163c2.1	99	41.679	ENSPFOG00000005470	-	99	47.952	Poecilia_formosa
ENSDARG00000100612	si:ch211-163c2.1	97	34.185	ENSPFOG00000000012	-	99	33.657	Poecilia_formosa
ENSDARG00000100612	si:ch211-163c2.1	97	34.709	ENSPMEG00000004328	-	95	53.535	Poecilia_mexicana
ENSDARG00000100612	si:ch211-163c2.1	55	53.420	ENSPREG00000003544	-	93	52.716	Poecilia_reticulata
ENSDARG00000100612	si:ch211-163c2.1	96	33.820	ENSPREG00000007508	-	88	51.630	Poecilia_reticulata
ENSDARG00000100612	si:ch211-163c2.1	54	45.232	ENSPREG00000003531	-	98	45.232	Poecilia_reticulata
ENSDARG00000100612	si:ch211-163c2.1	88	30.076	ENSPPYG00000013479	PARP14	88	30.076	Pongo_abelii
ENSDARG00000100612	si:ch211-163c2.1	58	30.025	ENSPNAG00000028188	si:ch211-219a4.3	58	30.025	Pygocentrus_nattereri
ENSDARG00000100612	si:ch211-163c2.1	88	30.051	ENSRNOG00000023334	Parp14	76	30.051	Rattus_norvegicus
ENSDARG00000100612	si:ch211-163c2.1	97	32.575	ENSSDUG00000001575	-	92	32.575	Seriola_dumerili
ENSDARG00000100612	si:ch211-163c2.1	91	42.541	ENSSDUG00000007589	-	96	42.377	Seriola_dumerili
ENSDARG00000100612	si:ch211-163c2.1	97	32.455	ENSSLDG00000005702	-	94	46.698	Seriola_lalandi_dorsalis
ENSDARG00000100612	si:ch211-163c2.1	85	30.457	ENSSPUG00000016301	-	80	30.457	Sphenodon_punctatus
ENSDARG00000100612	si:ch211-163c2.1	87	30.122	ENSSPUG00000016288	-	65	30.122	Sphenodon_punctatus
ENSDARG00000100612	si:ch211-163c2.1	99	33.174	ENSSPAG00000023229	-	96	33.174	Stegastes_partitus
ENSDARG00000100612	si:ch211-163c2.1	88	41.955	ENSSPAG00000004771	-	98	41.955	Stegastes_partitus
ENSDARG00000100612	si:ch211-163c2.1	99	43.048	ENSSPAG00000004785	-	96	42.825	Stegastes_partitus
ENSDARG00000100612	si:ch211-163c2.1	60	30.083	ENSTGUG00000003925	PARP14	69	30.274	Taeniopygia_guttata
ENSDARG00000100612	si:ch211-163c2.1	74	47.475	ENSVPAG00000002158	PARP14	68	47.475	Vicugna_pacos
ENSDARG00000100612	si:ch211-163c2.1	58	33.420	ENSVVUG00000022533	PARP14	73	33.420	Vulpes_vulpes
ENSDARG00000100612	si:ch211-163c2.1	85	31.280	ENSXETG00000023401	-	72	31.280	Xenopus_tropicalis
ENSDARG00000100612	si:ch211-163c2.1	85	30.036	ENSXETG00000023399	parp14.2	60	30.036	Xenopus_tropicalis
ENSDARG00000100612	si:ch211-163c2.1	66	36.154	ENSXMAG00000027110	-	94	36.154	Xiphophorus_maculatus
ENSDARG00000100612	si:ch211-163c2.1	97	34.587	ENSXMAG00000016244	-	92	34.709	Xiphophorus_maculatus