EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSDARG00000100915 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-255f4.7
Alias: -
Full Name: si:ch211-255f4.7
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 15994 bases
Position: chr22:1539373-1555366
Accession: ZDB-GENE-050208-628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000152174	zf-C2H2	PF00096.26	6.3e-43	1	8
ENSDARP00000152174	zf-C2H2	PF00096.26	6.3e-43	2	8
ENSDARP00000152174	zf-C2H2	PF00096.26	6.3e-43	3	8
ENSDARP00000152174	zf-C2H2	PF00096.26	6.3e-43	4	8
ENSDARP00000152174	zf-C2H2	PF00096.26	6.3e-43	5	8
ENSDARP00000152174	zf-C2H2	PF00096.26	6.3e-43	6	8
ENSDARP00000152174	zf-C2H2	PF00096.26	6.3e-43	7	8
ENSDARP00000152174	zf-C2H2	PF00096.26	6.3e-43	8	8
ENSDARP00000152174	zf-met	PF12874.7	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000169338	-	1095	XM_003200941	ENSDARP00000137125	365 (aa)	XP_003200989	A0A0R4IP87
ENSDART00000172104	-	231	-	ENSDARP00000136121	77 (aa)	-	A0A0R4ILI1
ENSDART00000183422	-	1944	-	ENSDARP00000153408	647 (aa)	-	A0A2R8RUZ8
ENSDART00000192088	-	5983	-	ENSDARP00000152174	277 (aa)	-	A0A2R8RT00

Gene Model

Click here to download ENSDARG00000100915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000100915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000100915	si:ch211-255f4.7	100	63.372	ENSDARG00000094736	znf1157	85	63.372
ENSDARG00000100915	si:ch211-255f4.7	100	54.478	ENSDARG00000103954	znf1152	89	54.478
ENSDARG00000100915	si:ch211-255f4.7	99	50.331	ENSDARG00000115737	AL954741.2	99	60.219
ENSDARG00000100915	si:ch211-255f4.7	99	50.718	ENSDARG00000116814	CU570894.2	98	50.718
ENSDARG00000100915	si:ch211-255f4.7	100	46.352	ENSDARG00000014775	zgc:113220	92	46.352
ENSDARG00000100915	si:ch211-255f4.7	100	52.190	ENSDARG00000100882	znf1154	76	52.190
ENSDARG00000100915	si:ch211-255f4.7	99	46.502	ENSDARG00000095704	si:dkey-4c15.13	85	45.525
ENSDARG00000100915	si:ch211-255f4.7	99	50.226	ENSDARG00000078159	zgc:175284	88	50.226
ENSDARG00000100915	si:ch211-255f4.7	100	60.588	ENSDARG00000088507	znf982	78	66.667
ENSDARG00000100915	si:ch211-255f4.7	99	48.819	ENSDARG00000099618	si:dkey-1b17.6	90	45.263
ENSDARG00000100915	si:ch211-255f4.7	99	54.545	ENSDARG00000071790	znf1153	78	46.715
ENSDARG00000100915	si:ch211-255f4.7	100	64.035	ENSDARG00000115857	znf1001	93	64.035
ENSDARG00000100915	si:ch211-255f4.7	99	47.826	ENSDARG00000106808	CU856622.1	99	45.769
ENSDARG00000100915	si:ch211-255f4.7	100	64.912	ENSDARG00000102401	znf1001	93	64.912
ENSDARG00000100915	si:ch211-255f4.7	99	55.839	ENSDARG00000104065	znf1154	88	55.839
ENSDARG00000100915	si:ch211-255f4.7	99	48.669	ENSDARG00000071833	znf1162	82	48.669
ENSDARG00000100915	si:ch211-255f4.7	99	57.692	ENSDARG00000098613	si:dkey-15h8.16	75	57.692
ENSDARG00000100915	si:ch211-255f4.7	100	60.377	ENSDARG00000069869	zgc:113030	99	60.377
ENSDARG00000100915	si:ch211-255f4.7	99	67.778	ENSDARG00000098898	si:ch211-255f4.2	99	67.778
ENSDARG00000100915	si:ch211-255f4.7	99	60.633	ENSDARG00000111614	znf1183	84	60.633