EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000101044 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-138e16.6
Alias: -
Full Name: si:ch73-138e16.6
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 63925 bases
Position: chr22:1313046-1376970
Accession: ZDB-GENE-070705-205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000149936	zf-C2H2	PF00096.26	3.3e-25	1	5
ENSDARP00000149936	zf-C2H2	PF00096.26	3.3e-25	2	5
ENSDARP00000149936	zf-C2H2	PF00096.26	3.3e-25	3	5
ENSDARP00000149936	zf-C2H2	PF00096.26	3.3e-25	4	5
ENSDARP00000149936	zf-C2H2	PF00096.26	3.3e-25	5	5
ENSDARP00000135204	zf-C2H2	PF00096.26	4.4e-25	1	4
ENSDARP00000135204	zf-C2H2	PF00096.26	4.4e-25	2	4
ENSDARP00000135204	zf-C2H2	PF00096.26	4.4e-25	3	4
ENSDARP00000135204	zf-C2H2	PF00096.26	4.4e-25	4	4
ENSDARP00000135204	zf-met	PF12874.7	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000187250	-	5617	-	ENSDARP00000149936	239 (aa)	-	A0A2R8Q6Y9
ENSDART00000170421	-	888	-	ENSDARP00000135204	240 (aa)	-	A0A0R4ILZ0

Gene Model

Click here to download ENSDARG00000101044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000101044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000101044	si:ch73-138e16.6	96	51.550	ENSDARG00000111899	zgc:171435	89	51.550
ENSDARG00000101044	si:ch73-138e16.6	96	66.234	ENSDARG00000099890	CU207221.2	99	66.234
ENSDARG00000101044	si:ch73-138e16.6	96	54.839	ENSDARG00000094736	znf1157	98	63.793
ENSDARG00000101044	si:ch73-138e16.6	90	58.796	ENSDARG00000103530	zgc:113102	96	58.796
ENSDARG00000101044	si:ch73-138e16.6	88	64.975	ENSDARG00000099172	BX000701.1	95	57.576
ENSDARG00000101044	si:ch73-138e16.6	96	55.217	ENSDARG00000103827	znf1144	95	75.904
ENSDARG00000101044	si:ch73-138e16.6	96	51.399	ENSDARG00000053165	zgc:113377	99	51.399
ENSDARG00000101044	si:ch73-138e16.6	100	51.613	ENSDARG00000115326	znf1002	93	52.439
ENSDARG00000101044	si:ch73-138e16.6	91	69.000	ENSDARG00000077712	zgc:113886	98	69.000
ENSDARG00000101044	si:ch73-138e16.6	92	59.716	ENSDARG00000102411	CR847850.1	87	59.716
ENSDARG00000101044	si:ch73-138e16.6	82	65.152	ENSDARG00000106565	CABZ01066720.1	87	65.152
ENSDARG00000101044	si:ch73-138e16.6	96	57.732	ENSDARG00000071833	znf1162	100	52.381
ENSDARG00000101044	si:ch73-138e16.6	89	59.296	ENSDARG00000105074	BX000701.2	98	59.296
ENSDARG00000101044	si:ch73-138e16.6	99	54.772	ENSDARG00000111614	znf1183	82	54.772
ENSDARG00000101044	si:ch73-138e16.6	99	51.154	ENSDARG00000112141	znf1169	87	52.124
ENSDARG00000101044	si:ch73-138e16.6	96	57.917	ENSDARG00000113011	zgc:113102	100	54.412
ENSDARG00000101044	si:ch73-138e16.6	87	65.072	ENSDARG00000078814	si:dkey-34m19.3	81	65.072
ENSDARG00000101044	si:ch73-138e16.6	93	54.867	ENSDARG00000099618	si:dkey-1b17.6	92	66.129
ENSDARG00000101044	si:ch73-138e16.6	92	57.466	ENSDARG00000098923	zgc:173577	96	57.870
ENSDARG00000101044	si:ch73-138e16.6	96	53.478	ENSDARG00000116814	CU570894.2	88	53.478
ENSDARG00000101044	si:ch73-138e16.6	88	60.714	ENSDARG00000092605	znf1003	95	46.667
ENSDARG00000101044	si:ch73-138e16.6	99	58.140	ENSDARG00000088507	znf982	100	55.249
ENSDARG00000101044	si:ch73-138e16.6	88	60.664	ENSDARG00000090740	zmp:0000001003	100	60.000
ENSDARG00000101044	si:ch73-138e16.6	99	52.119	ENSDARG00000073821	znf1177	89	52.119
ENSDARG00000101044	si:ch73-138e16.6	88	56.213	ENSDARG00000095704	si:dkey-4c15.13	97	57.627
ENSDARG00000101044	si:ch73-138e16.6	99	56.977	ENSDARG00000109703	FO834825.1	99	56.977
ENSDARG00000101044	si:ch73-138e16.6	77	48.826	ENSDARG00000102053	znf1164	100	57.353
ENSDARG00000101044	si:ch73-138e16.6	99	52.632	ENSDARG00000100361	znf1174	92	53.383

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000101044	si:ch73-138e16.6	90	45.033	ENSACIG00000008886	znf1164	80	46.897	Amphilophus_citrinellus
ENSDARG00000101044	si:ch73-138e16.6	89	48.108	ENSACIG00000007882	-	73	48.108	Amphilophus_citrinellus
ENSDARG00000101044	si:ch73-138e16.6	99	53.049	ENSMZEG00005027943	-	91	47.807	Maylandia_zebra
ENSDARG00000101044	si:ch73-138e16.6	82	42.781	ENSMZEG00005005162	-	76	42.781	Maylandia_zebra
ENSDARG00000101044	si:ch73-138e16.6	87	43.689	ENSMZEG00005025568	-	80	43.689	Maylandia_zebra
ENSDARG00000101044	si:ch73-138e16.6	96	42.857	ENSPMGG00000001558	znf1174	82	42.857	Periophthalmus_magnuspinnatus
ENSDARG00000101044	si:ch73-138e16.6	90	43.590	ENSPNYG00000024183	zgc:173577	98	43.590	Pundamilia_nyererei
ENSDARG00000101044	si:ch73-138e16.6	95	47.761	ENSSDUG00000008682	-	99	44.776	Seriola_dumerili
ENSDARG00000101044	si:ch73-138e16.6	95	40.310	ENSSPAG00000009426	-	77	40.310	Stegastes_partitus