EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000101072 (Gene tree)
Gene ID: 560386
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex%2C subunit 6b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 30469 bases
Position: chr14:48734794-48765262
Accession: ZDB-GENE-071004-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000131996	Exo_endo_phos	PF03372.23	1.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000166463	-	8351	-	ENSDARP00000131996	558 (aa)	-	A0A0R4IF89

Gene Model

Click here to download ENSDARG00000101072's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000101072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000101072	cnot6b	100	85.484	ENSDARG00000008255	cnot6a	100	85.484
ENSDARG00000101072	cnot6b	99	74.327	ENSDARG00000054597	cnot6l	98	74.327

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000101072	cnot6b	100	83.513	ENSG00000113300	CNOT6	100	83.513	Homo_sapiens
ENSDARG00000101072	cnot6b	100	88.730	ENSAPOG00000009994	cnot6b	100	88.730	Acanthochromis_polyacanthus
ENSDARG00000101072	cnot6b	100	83.929	ENSAMEG00000000949	CNOT6	99	83.929	Ailuropoda_melanoleuca
ENSDARG00000101072	cnot6b	100	86.583	ENSACIG00000016566	cnot6b	100	86.583	Amphilophus_citrinellus
ENSDARG00000101072	cnot6b	100	88.730	ENSAOCG00000006893	cnot6b	100	88.730	Amphiprion_ocellaris
ENSDARG00000101072	cnot6b	100	88.730	ENSAPEG00000016949	cnot6b	100	88.730	Amphiprion_percula
ENSDARG00000101072	cnot6b	100	86.941	ENSATEG00000007862	cnot6b	100	86.941	Anabas_testudineus
ENSDARG00000101072	cnot6b	100	84.946	ENSAPLG00000012715	CNOT6	99	84.946	Anas_platyrhynchos
ENSDARG00000101072	cnot6b	100	84.409	ENSACAG00000016548	CNOT6	100	84.409	Anolis_carolinensis
ENSDARG00000101072	cnot6b	100	84.050	ENSANAG00000030436	CNOT6	96	84.050	Aotus_nancymaae
ENSDARG00000101072	cnot6b	100	87.120	ENSACLG00000008279	cnot6b	100	87.299	Astatotilapia_calliptera
ENSDARG00000101072	cnot6b	100	86.918	ENSAMXG00000034694	cnot6b	100	86.918	Astyanax_mexicanus
ENSDARG00000101072	cnot6b	100	86.380	ENSAMXG00000019140	cnot6a	100	86.380	Astyanax_mexicanus
ENSDARG00000101072	cnot6b	100	84.409	ENSBTAG00000017362	CNOT6	100	84.409	Bos_taurus
ENSDARG00000101072	cnot6b	100	84.050	ENSCJAG00000009795	CNOT6	100	84.050	Callithrix_jacchus
ENSDARG00000101072	cnot6b	100	84.229	ENSCAFG00000000464	CNOT6	100	84.229	Canis_familiaris
ENSDARG00000101072	cnot6b	100	84.229	ENSCAFG00020002441	CNOT6	100	84.229	Canis_lupus_dingo
ENSDARG00000101072	cnot6b	100	84.229	ENSCHIG00000019100	CNOT6	100	84.229	Capra_hircus
ENSDARG00000101072	cnot6b	100	82.975	ENSTSYG00000003982	CNOT6	100	82.975	Carlito_syrichta
ENSDARG00000101072	cnot6b	100	79.570	ENSCPOG00000035657	CNOT6	100	79.570	Cavia_porcellus
ENSDARG00000101072	cnot6b	100	79.570	ENSCCAG00000033670	CNOT6	100	79.570	Cebus_capucinus
ENSDARG00000101072	cnot6b	100	83.513	ENSCATG00000042014	CNOT6	100	83.513	Cercocebus_atys
ENSDARG00000101072	cnot6b	100	82.796	ENSCLAG00000010489	CNOT6	100	82.796	Chinchilla_lanigera
ENSDARG00000101072	cnot6b	100	83.513	ENSCSAG00000008165	CNOT6	100	83.513	Chlorocebus_sabaeus
ENSDARG00000101072	cnot6b	100	84.050	ENSCHOG00000009680	CNOT6	100	84.050	Choloepus_hoffmanni
ENSDARG00000101072	cnot6b	100	85.125	ENSCPBG00000008908	CNOT6	100	85.125	Chrysemys_picta_bellii
ENSDARG00000101072	cnot6b	100	83.692	ENSCANG00000026756	CNOT6	100	83.692	Colobus_angolensis_palliatus
ENSDARG00000101072	cnot6b	100	82.437	ENSCGRG00001011452	Cnot6	100	82.437	Cricetulus_griseus_chok1gshd
ENSDARG00000101072	cnot6b	100	80.824	ENSCGRG00000010407	Cnot6	100	80.824	Cricetulus_griseus_crigri
ENSDARG00000101072	cnot6b	100	87.478	ENSCSEG00000010939	cnot6b	100	87.478	Cynoglossus_semilaevis
ENSDARG00000101072	cnot6b	100	87.657	ENSCVAG00000010538	cnot6b	100	87.657	Cyprinodon_variegatus
ENSDARG00000101072	cnot6b	100	84.588	ENSDNOG00000041644	CNOT6	100	84.588	Dasypus_novemcinctus
ENSDARG00000101072	cnot6b	100	75.269	ENSDORG00000001708	Cnot6	100	75.269	Dipodomys_ordii
ENSDARG00000101072	cnot6b	100	67.442	ENSETEG00000006975	CNOT6	100	67.442	Echinops_telfairi
ENSDARG00000101072	cnot6b	90	79.641	ENSEASG00005012957	-	99	79.641	Equus_asinus_asinus
ENSDARG00000101072	cnot6b	100	83.871	ENSEASG00005012794	-	100	83.871	Equus_asinus_asinus
ENSDARG00000101072	cnot6b	100	79.032	ENSECAG00000012704	-	99	79.032	Equus_caballus
ENSDARG00000101072	cnot6b	100	84.409	ENSECAG00000019325	CNOT6	100	84.409	Equus_caballus
ENSDARG00000101072	cnot6b	100	83.513	ENSEEUG00000015382	CNOT6	100	83.513	Erinaceus_europaeus
ENSDARG00000101072	cnot6b	100	82.437	ENSELUG00000024580	cnot6a	100	82.437	Esox_lucius
ENSDARG00000101072	cnot6b	100	85.362	ENSELUG00000015981	cnot6b	99	85.362	Esox_lucius
ENSDARG00000101072	cnot6b	100	84.588	ENSFCAG00000001881	CNOT6	100	84.588	Felis_catus
ENSDARG00000101072	cnot6b	100	85.125	ENSFALG00000007699	CNOT6	100	85.125	Ficedula_albicollis
ENSDARG00000101072	cnot6b	100	82.796	ENSFDAG00000001999	CNOT6	100	82.796	Fukomys_damarensis
ENSDARG00000101072	cnot6b	68	85.938	ENSFHEG00000013756	cnot6b	99	85.938	Fundulus_heteroclitus
ENSDARG00000101072	cnot6b	95	88.091	ENSGMOG00000009767	cnot6b	99	88.091	Gadus_morhua
ENSDARG00000101072	cnot6b	100	84.946	ENSGALG00000034316	CNOT6	100	84.946	Gallus_gallus
ENSDARG00000101072	cnot6b	100	87.478	ENSGAFG00000008525	cnot6b	100	87.478	Gambusia_affinis
ENSDARG00000101072	cnot6b	95	85.444	ENSGACG00000018046	cnot6b	99	85.444	Gasterosteus_aculeatus
ENSDARG00000101072	cnot6b	100	70.841	ENSGAGG00000012176	CNOT6	100	70.841	Gopherus_agassizii
ENSDARG00000101072	cnot6b	100	83.513	ENSGGOG00000003675	CNOT6	100	83.513	Gorilla_gorilla
ENSDARG00000101072	cnot6b	100	87.299	ENSHBUG00000002819	cnot6b	100	87.478	Haplochromis_burtoni
ENSDARG00000101072	cnot6b	100	82.796	ENSHGLG00000017756	CNOT6	100	82.796	Heterocephalus_glaber_female
ENSDARG00000101072	cnot6b	100	82.796	ENSHGLG00100005747	CNOT6	100	82.796	Heterocephalus_glaber_male
ENSDARG00000101072	cnot6b	100	86.047	ENSHCOG00000016176	cnot6b	100	86.225	Hippocampus_comes
ENSDARG00000101072	cnot6b	100	85.663	ENSIPUG00000019831	cnot6a	100	85.663	Ictalurus_punctatus
ENSDARG00000101072	cnot6b	100	87.634	ENSIPUG00000017482	cnot6b	100	87.634	Ictalurus_punctatus
ENSDARG00000101072	cnot6b	100	83.871	ENSSTOG00000002803	CNOT6	100	83.871	Ictidomys_tridecemlineatus
ENSDARG00000101072	cnot6b	100	82.975	ENSJJAG00000012296	Cnot6	100	82.975	Jaculus_jaculus
ENSDARG00000101072	cnot6b	100	87.120	ENSKMAG00000004640	cnot6b	100	87.120	Kryptolebias_marmoratus
ENSDARG00000101072	cnot6b	100	86.762	ENSLBEG00000027917	cnot6b	100	86.941	Labrus_bergylta
ENSDARG00000101072	cnot6b	100	89.068	ENSLOCG00000010102	cnot6b	99	89.068	Lepisosteus_oculatus
ENSDARG00000101072	cnot6b	100	84.946	ENSLAFG00000016742	CNOT6	100	84.946	Loxodonta_africana
ENSDARG00000101072	cnot6b	100	83.513	ENSMFAG00000030867	CNOT6	100	83.513	Macaca_fascicularis
ENSDARG00000101072	cnot6b	100	83.513	ENSMMUG00000018690	CNOT6	100	83.513	Macaca_mulatta
ENSDARG00000101072	cnot6b	100	83.513	ENSMNEG00000038565	CNOT6	100	83.513	Macaca_nemestrina
ENSDARG00000101072	cnot6b	100	83.513	ENSMLEG00000010555	CNOT6	100	83.513	Mandrillus_leucophaeus
ENSDARG00000101072	cnot6b	100	89.088	ENSMAMG00000007515	cnot6b	100	89.088	Mastacembelus_armatus
ENSDARG00000101072	cnot6b	100	87.120	ENSMZEG00005012899	cnot6b	100	87.299	Maylandia_zebra
ENSDARG00000101072	cnot6b	100	83.154	ENSMAUG00000019798	Cnot6	100	83.154	Mesocricetus_auratus
ENSDARG00000101072	cnot6b	100	82.258	ENSMICG00000013018	-	100	82.258	Microcebus_murinus
ENSDARG00000101072	cnot6b	98	75.963	ENSMICG00000028378	-	99	75.963	Microcebus_murinus
ENSDARG00000101072	cnot6b	100	83.333	ENSMOCG00000021662	Cnot6	100	83.333	Microtus_ochrogaster
ENSDARG00000101072	cnot6b	100	84.767	ENSMMOG00000003227	cnot6b	100	84.767	Mola_mola
ENSDARG00000101072	cnot6b	100	84.409	ENSMODG00000003979	CNOT6	100	84.409	Monodelphis_domestica
ENSDARG00000101072	cnot6b	100	89.088	ENSMALG00000014251	cnot6b	100	89.088	Monopterus_albus
ENSDARG00000101072	cnot6b	100	83.333	MGP_CAROLIEiJ_G0016277	Cnot6	100	83.333	Mus_caroli
ENSDARG00000101072	cnot6b	100	83.333	ENSMUSG00000020362	Cnot6	100	83.333	Mus_musculus
ENSDARG00000101072	cnot6b	100	83.333	MGP_PahariEiJ_G0017413	Cnot6	100	83.333	Mus_pahari
ENSDARG00000101072	cnot6b	100	83.154	MGP_SPRETEiJ_G0017122	Cnot6	100	83.154	Mus_spretus
ENSDARG00000101072	cnot6b	100	84.229	ENSMPUG00000000587	CNOT6	96	84.229	Mustela_putorius_furo
ENSDARG00000101072	cnot6b	100	82.948	ENSMLUG00000010257	CNOT6	100	82.948	Myotis_lucifugus
ENSDARG00000101072	cnot6b	100	82.437	ENSNGAG00000008269	Cnot6	100	82.437	Nannospalax_galili
ENSDARG00000101072	cnot6b	100	87.299	ENSNBRG00000010798	cnot6b	100	87.478	Neolamprologus_brichardi
ENSDARG00000101072	cnot6b	100	82.437	ENSNLEG00000002322	CNOT6	100	82.437	Nomascus_leucogenys
ENSDARG00000101072	cnot6b	81	82.791	ENSMEUG00000000025	CNOT6	81	82.791	Notamacropus_eugenii
ENSDARG00000101072	cnot6b	88	85.000	ENSOPRG00000008244	-	88	85.000	Ochotona_princeps
ENSDARG00000101072	cnot6b	100	82.796	ENSODEG00000007041	CNOT6	100	82.796	Octodon_degus
ENSDARG00000101072	cnot6b	75	87.234	ENSONIG00000013027	cnot6b	99	87.234	Oreochromis_niloticus
ENSDARG00000101072	cnot6b	100	83.333	ENSOANG00000010226	CNOT6	100	83.333	Ornithorhynchus_anatinus
ENSDARG00000101072	cnot6b	100	83.036	ENSOCUG00000011083	CNOT6	100	83.036	Oryctolagus_cuniculus
ENSDARG00000101072	cnot6b	100	88.014	ENSORLG00000005059	cnot6b	100	88.014	Oryzias_latipes
ENSDARG00000101072	cnot6b	100	88.014	ENSORLG00020012784	cnot6b	100	88.014	Oryzias_latipes_hni
ENSDARG00000101072	cnot6b	94	88.337	ENSORLG00015022658	cnot6b	98	88.337	Oryzias_latipes_hsok
ENSDARG00000101072	cnot6b	100	88.372	ENSOMEG00000005295	cnot6b	100	88.372	Oryzias_melastigma
ENSDARG00000101072	cnot6b	94	84.000	ENSOGAG00000032470	CNOT6	100	84.000	Otolemur_garnettii
ENSDARG00000101072	cnot6b	97	83.794	ENSOARG00000001003	CNOT6	100	83.794	Ovis_aries
ENSDARG00000101072	cnot6b	100	83.513	ENSPPAG00000032253	CNOT6	100	83.513	Pan_paniscus
ENSDARG00000101072	cnot6b	100	84.767	ENSPPRG00000011912	CNOT6	100	84.767	Panthera_pardus
ENSDARG00000101072	cnot6b	100	84.767	ENSPTIG00000016794	CNOT6	100	84.767	Panthera_tigris_altaica
ENSDARG00000101072	cnot6b	100	83.513	ENSPTRG00000017636	CNOT6	100	83.513	Pan_troglodytes
ENSDARG00000101072	cnot6b	100	83.513	ENSPANG00000016191	CNOT6	100	83.513	Papio_anubis
ENSDARG00000101072	cnot6b	100	86.380	ENSPKIG00000021368	cnot6b	100	86.380	Paramormyrops_kingsleyae
ENSDARG00000101072	cnot6b	98	85.138	ENSPSIG00000017307	CNOT6	100	85.138	Pelodiscus_sinensis
ENSDARG00000101072	cnot6b	100	86.762	ENSPMGG00000011238	cnot6b	100	86.762	Periophthalmus_magnuspinnatus
ENSDARG00000101072	cnot6b	100	82.796	ENSPEMG00000000627	Cnot6	100	82.796	Peromyscus_maniculatus_bairdii
ENSDARG00000101072	cnot6b	100	84.409	ENSPCIG00000020319	CNOT6	99	84.409	Phascolarctos_cinereus
ENSDARG00000101072	cnot6b	100	87.478	ENSPFOG00000006291	cnot6b	100	87.478	Poecilia_formosa
ENSDARG00000101072	cnot6b	100	84.079	ENSPLAG00000008266	cnot6b	100	84.079	Poecilia_latipinna
ENSDARG00000101072	cnot6b	100	87.657	ENSPMEG00000009091	cnot6b	100	87.657	Poecilia_mexicana
ENSDARG00000101072	cnot6b	100	86.225	ENSPREG00000003713	cnot6b	100	86.225	Poecilia_reticulata
ENSDARG00000101072	cnot6b	100	83.513	ENSPPYG00000016137	CNOT6	100	83.513	Pongo_abelii
ENSDARG00000101072	cnot6b	59	89.286	ENSPCAG00000005599	-	59	89.286	Procavia_capensis
ENSDARG00000101072	cnot6b	100	78.315	ENSPCOG00000017359	CNOT6	100	79.032	Propithecus_coquereli
ENSDARG00000101072	cnot6b	100	81.362	ENSPVAG00000003069	CNOT6	100	81.362	Pteropus_vampyrus
ENSDARG00000101072	cnot6b	100	86.941	ENSPNYG00000000321	cnot6b	100	87.120	Pundamilia_nyererei
ENSDARG00000101072	cnot6b	100	87.276	ENSPNAG00000028816	cnot6b	100	87.276	Pygocentrus_nattereri
ENSDARG00000101072	cnot6b	100	86.380	ENSPNAG00000029586	cnot6a	100	86.380	Pygocentrus_nattereri
ENSDARG00000101072	cnot6b	100	82.796	ENSRNOG00000054891	Cnot6	100	82.796	Rattus_norvegicus
ENSDARG00000101072	cnot6b	100	83.513	ENSRBIG00000004309	CNOT6	100	83.513	Rhinopithecus_bieti
ENSDARG00000101072	cnot6b	100	83.513	ENSRROG00000035378	CNOT6	100	83.801	Rhinopithecus_roxellana
ENSDARG00000101072	cnot6b	100	84.229	ENSSBOG00000030494	CNOT6	100	84.229	Saimiri_boliviensis_boliviensis
ENSDARG00000101072	cnot6b	100	84.409	ENSSHAG00000017436	CNOT6	100	84.409	Sarcophilus_harrisii
ENSDARG00000101072	cnot6b	100	86.201	ENSSFOG00015022383	cnot6a	96	86.201	Scleropages_formosus
ENSDARG00000101072	cnot6b	100	87.455	ENSSFOG00015015133	CNOT6	100	87.455	Scleropages_formosus
ENSDARG00000101072	cnot6b	100	87.478	ENSSMAG00000003084	cnot6b	100	87.478	Scophthalmus_maximus
ENSDARG00000101072	cnot6b	100	89.267	ENSSDUG00000004151	cnot6b	100	89.267	Seriola_dumerili
ENSDARG00000101072	cnot6b	100	89.088	ENSSLDG00000004448	cnot6b	100	89.267	Seriola_lalandi_dorsalis
ENSDARG00000101072	cnot6b	64	67.967	ENSSARG00000012650	-	100	67.967	Sorex_araneus
ENSDARG00000101072	cnot6b	100	85.484	ENSSPUG00000007893	CNOT6	100	85.484	Sphenodon_punctatus
ENSDARG00000101072	cnot6b	100	88.909	ENSSPAG00000000149	cnot6b	100	88.909	Stegastes_partitus
ENSDARG00000101072	cnot6b	100	84.409	ENSSSCG00000014009	CNOT6	100	84.665	Sus_scrofa
ENSDARG00000101072	cnot6b	100	84.767	ENSTGUG00000001119	CNOT6	100	84.767	Taeniopygia_guttata
ENSDARG00000101072	cnot6b	100	86.201	ENSTRUG00000002818	cnot6b	100	86.201	Takifugu_rubripes
ENSDARG00000101072	cnot6b	100	86.738	ENSTNIG00000004443	cnot6b	99	86.738	Tetraodon_nigroviridis
ENSDARG00000101072	cnot6b	76	76.119	ENSTBEG00000017094	-	87	76.119	Tupaia_belangeri
ENSDARG00000101072	cnot6b	100	84.050	ENSTTRG00000009363	CNOT6	100	84.050	Tursiops_truncatus
ENSDARG00000101072	cnot6b	90	75.149	ENSUAMG00000004579	CNOT6	99	75.149	Ursus_americanus
ENSDARG00000101072	cnot6b	100	80.171	ENSUMAG00000024577	CNOT6	100	80.171	Ursus_maritimus
ENSDARG00000101072	cnot6b	84	82.751	ENSVPAG00000003593	CNOT6	83	82.751	Vicugna_pacos
ENSDARG00000101072	cnot6b	100	84.229	ENSVVUG00000026940	CNOT6	100	84.229	Vulpes_vulpes
ENSDARG00000101072	cnot6b	100	84.436	ENSXCOG00000003360	cnot6b	100	84.436	Xiphophorus_couchianus
ENSDARG00000101072	cnot6b	100	87.657	ENSXMAG00000008730	cnot6b	100	87.657	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004535	poly(A)-specific ribonuclease activity	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process