EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000101222 (Gene tree)
Gene ID: 100536270
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5683 bases
Position: chr19:3840955-3846637
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000138931	LSM	PF01423.22	1.6e-11	1	1
ENSDARP00000136407	LSM	PF01423.22	2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000159043	-	399	-	ENSDARP00000136407	132 (aa)	-	F1Q940
ENSDART00000172305	-	881	XM_009293976	ENSDARP00000138931	120 (aa)	XP_005173790	A0A0R4IV27

Gene Model

Click here to download ENSDARG00000101222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000101222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000101222	oscp1a	71	95.294	ENSDARG00000109563	CABZ01074453.1	99	95.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000101222	oscp1a	99	70.000	ENSG00000181817	LSM10	98	70.000	Homo_sapiens
ENSDARG00000101222	oscp1a	100	72.727	ENSAMEG00000019854	LSM10	98	72.727	Ailuropoda_melanoleuca
ENSDARG00000101222	oscp1a	96	77.586	ENSACIG00000015420	oscp1a	81	73.984	Amphilophus_citrinellus
ENSDARG00000101222	oscp1a	98	73.729	ENSAOCG00000014654	-	98	73.729	Amphiprion_ocellaris
ENSDARG00000101222	oscp1a	91	73.394	ENSAOCG00000015607	LSM10	84	73.394	Amphiprion_ocellaris
ENSDARG00000101222	oscp1a	98	73.729	ENSAOCG00000015618	LSM10	98	73.729	Amphiprion_ocellaris
ENSDARG00000101222	oscp1a	98	73.729	ENSAPEG00000021845	-	98	73.729	Amphiprion_percula
ENSDARG00000101222	oscp1a	91	73.394	ENSAPEG00000021851	LSM10	84	73.394	Amphiprion_percula
ENSDARG00000101222	oscp1a	96	74.138	ENSATEG00000006310	oscp1a	86	74.138	Anabas_testudineus
ENSDARG00000101222	oscp1a	100	61.983	ENSACAG00000001231	LSM10	98	61.983	Anolis_carolinensis
ENSDARG00000101222	oscp1a	99	70.000	ENSANAG00000018759	-	98	70.000	Aotus_nancymaae
ENSDARG00000101222	oscp1a	99	68.333	ENSANAG00000031489	-	98	68.333	Aotus_nancymaae
ENSDARG00000101222	oscp1a	98	75.424	ENSACLG00000004728	oscp1a	96	75.424	Astatotilapia_calliptera
ENSDARG00000101222	oscp1a	98	79.487	ENSAMXG00000025301	oscp1a	98	79.487	Astyanax_mexicanus
ENSDARG00000101222	oscp1a	99	70.000	ENSBTAG00000024096	LSM10	98	70.000	Bos_taurus
ENSDARG00000101222	oscp1a	99	70.833	ENSCJAG00000044880	LSM10	98	70.833	Callithrix_jacchus
ENSDARG00000101222	oscp1a	100	72.727	ENSCAFG00000003382	LSM10	98	72.727	Canis_familiaris
ENSDARG00000101222	oscp1a	100	72.727	ENSCAFG00020008920	LSM10	98	72.727	Canis_lupus_dingo
ENSDARG00000101222	oscp1a	99	70.000	ENSCHIG00000009398	LSM10	98	70.000	Capra_hircus
ENSDARG00000101222	oscp1a	100	72.727	ENSCAPG00000012567	LSM10	98	72.727	Cavia_aperea
ENSDARG00000101222	oscp1a	100	72.727	ENSCPOG00000039302	LSM10	98	72.727	Cavia_porcellus
ENSDARG00000101222	oscp1a	99	68.333	ENSCCAG00000008378	-	98	68.333	Cebus_capucinus
ENSDARG00000101222	oscp1a	99	70.000	ENSCCAG00000018913	-	98	70.000	Cebus_capucinus
ENSDARG00000101222	oscp1a	99	69.167	ENSCATG00000006589	LSM10	98	69.167	Cercocebus_atys
ENSDARG00000101222	oscp1a	100	71.074	ENSCLAG00000008633	LSM10	98	71.074	Chinchilla_lanigera
ENSDARG00000101222	oscp1a	99	69.167	ENSCSAG00000000134	LSM10	98	69.167	Chlorocebus_sabaeus
ENSDARG00000101222	oscp1a	100	68.293	ENSCHOG00000008615	LSM10	98	68.293	Choloepus_hoffmanni
ENSDARG00000101222	oscp1a	82	37.755	ENSCING00000024984	-	85	37.755	Ciona_intestinalis
ENSDARG00000101222	oscp1a	85	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSDARG00000101222	oscp1a	99	69.167	ENSCANG00000019928	LSM10	98	69.167	Colobus_angolensis_palliatus
ENSDARG00000101222	oscp1a	95	64.957	ENSCGRG00001022673	-	94	64.957	Cricetulus_griseus_chok1gshd
ENSDARG00000101222	oscp1a	100	71.901	ENSCGRG00001004317	-	99	71.901	Cricetulus_griseus_chok1gshd
ENSDARG00000101222	oscp1a	95	64.957	ENSCGRG00000015514	-	94	64.957	Cricetulus_griseus_crigri
ENSDARG00000101222	oscp1a	100	71.901	ENSCGRG00000014935	-	99	71.901	Cricetulus_griseus_crigri
ENSDARG00000101222	oscp1a	98	72.881	ENSCSEG00000010374	oscp1a	79	72.881	Cynoglossus_semilaevis
ENSDARG00000101222	oscp1a	98	70.940	ENSCVAG00000001536	oscp1a	89	70.940	Cyprinodon_variegatus
ENSDARG00000101222	oscp1a	99	71.667	ENSDNOG00000036662	LSM10	98	71.667	Dasypus_novemcinctus
ENSDARG00000101222	oscp1a	100	71.901	ENSDORG00000007579	Lsm10	98	71.901	Dipodomys_ordii
ENSDARG00000101222	oscp1a	100	72.500	ENSETEG00000005703	LSM10	98	72.500	Echinops_telfairi
ENSDARG00000101222	oscp1a	93	52.679	ENSEBUG00000001312	oscp1a	92	52.679	Eptatretus_burgeri
ENSDARG00000101222	oscp1a	100	72.727	ENSEASG00005012194	LSM10	98	72.727	Equus_asinus_asinus
ENSDARG00000101222	oscp1a	100	72.727	ENSECAG00000005071	LSM10	98	72.727	Equus_caballus
ENSDARG00000101222	oscp1a	100	71.074	ENSEEUG00000012032	LSM10	98	71.074	Erinaceus_europaeus
ENSDARG00000101222	oscp1a	100	79.339	ENSELUG00000007452	oscp1a	99	79.339	Esox_lucius
ENSDARG00000101222	oscp1a	100	65.289	ENSFALG00000000851	LSM10	98	65.289	Ficedula_albicollis
ENSDARG00000101222	oscp1a	100	71.901	ENSFDAG00000021056	LSM10	98	71.901	Fukomys_damarensis
ENSDARG00000101222	oscp1a	91	72.072	ENSFHEG00000001058	oscp1a	96	72.072	Fundulus_heteroclitus
ENSDARG00000101222	oscp1a	98	70.339	ENSGMOG00000019832	oscp1a	99	70.339	Gadus_morhua
ENSDARG00000101222	oscp1a	100	69.421	ENSGALG00000002127	LSM10	98	69.421	Gallus_gallus
ENSDARG00000101222	oscp1a	98	63.333	ENSGAFG00000016445	oscp1a	97	63.333	Gambusia_affinis
ENSDARG00000101222	oscp1a	98	73.950	ENSGACG00000002329	oscp1a	98	73.950	Gasterosteus_aculeatus
ENSDARG00000101222	oscp1a	100	67.769	ENSGAGG00000024848	LSM10	98	67.769	Gopherus_agassizii
ENSDARG00000101222	oscp1a	99	70.833	ENSGGOG00000003556	LSM10	98	70.833	Gorilla_gorilla
ENSDARG00000101222	oscp1a	98	76.271	ENSHBUG00000001722	oscp1a	96	76.271	Haplochromis_burtoni
ENSDARG00000101222	oscp1a	100	71.074	ENSHGLG00000011625	LSM10	98	71.074	Heterocephalus_glaber_female
ENSDARG00000101222	oscp1a	100	71.074	ENSHGLG00100001769	LSM10	98	71.074	Heterocephalus_glaber_male
ENSDARG00000101222	oscp1a	93	73.214	ENSIPUG00000005808	oscp1a	97	73.214	Ictalurus_punctatus
ENSDARG00000101222	oscp1a	100	72.727	ENSSTOG00000000606	LSM10	98	72.727	Ictidomys_tridecemlineatus
ENSDARG00000101222	oscp1a	98	75.424	ENSKMAG00000012143	oscp1a	98	75.424	Kryptolebias_marmoratus
ENSDARG00000101222	oscp1a	92	72.072	ENSLBEG00000017764	oscp1a	91	72.072	Labrus_bergylta
ENSDARG00000101222	oscp1a	100	68.595	ENSLACG00000015904	LSM10	93	68.595	Latimeria_chalumnae
ENSDARG00000101222	oscp1a	99	76.667	ENSLOCG00000018277	oscp1a	98	76.667	Lepisosteus_oculatus
ENSDARG00000101222	oscp1a	99	72.269	ENSLAFG00000009600	LSM10	98	72.269	Loxodonta_africana
ENSDARG00000101222	oscp1a	99	69.167	ENSMFAG00000009115	LSM10	98	69.167	Macaca_fascicularis
ENSDARG00000101222	oscp1a	99	69.167	ENSMMUG00000017338	LSM10	98	69.167	Macaca_mulatta
ENSDARG00000101222	oscp1a	99	69.167	ENSMNEG00000020023	LSM10	98	69.167	Macaca_nemestrina
ENSDARG00000101222	oscp1a	99	69.167	ENSMLEG00000025150	LSM10	98	69.167	Mandrillus_leucophaeus
ENSDARG00000101222	oscp1a	99	73.333	ENSMAMG00000004427	oscp1a	98	73.333	Mastacembelus_armatus
ENSDARG00000101222	oscp1a	98	75.424	ENSMZEG00005026307	oscp1a	96	75.424	Maylandia_zebra
ENSDARG00000101222	oscp1a	100	69.421	ENSMGAG00000015707	LSM10	98	69.421	Meleagris_gallopavo
ENSDARG00000101222	oscp1a	100	71.074	ENSMAUG00000016624	Lsm10	99	71.074	Mesocricetus_auratus
ENSDARG00000101222	oscp1a	100	70.248	ENSMOCG00000021943	Lsm10	99	70.248	Microtus_ochrogaster
ENSDARG00000101222	oscp1a	95	76.522	ENSMMOG00000013597	oscp1a	86	76.522	Mola_mola
ENSDARG00000101222	oscp1a	100	71.074	ENSMODG00000023328	LSM10	98	71.074	Monodelphis_domestica
ENSDARG00000101222	oscp1a	53	78.125	ENSMALG00000012661	oscp1a	50	78.125	Monopterus_albus
ENSDARG00000101222	oscp1a	100	69.421	MGP_CAROLIEiJ_G0026467	Lsm10	100	72.043	Mus_caroli
ENSDARG00000101222	oscp1a	100	69.421	ENSMUSG00000050188	Lsm10	100	72.043	Mus_musculus
ENSDARG00000101222	oscp1a	100	69.421	MGP_PahariEiJ_G0028798	Lsm10	100	72.043	Mus_pahari
ENSDARG00000101222	oscp1a	100	69.421	MGP_SPRETEiJ_G0027446	Lsm10	100	72.043	Mus_spretus
ENSDARG00000101222	oscp1a	100	72.727	ENSMPUG00000018593	LSM10	98	72.727	Mustela_putorius_furo
ENSDARG00000101222	oscp1a	100	73.554	ENSMLUG00000023895	LSM10	98	73.554	Myotis_lucifugus
ENSDARG00000101222	oscp1a	100	70.248	ENSNGAG00000015011	Lsm10	98	70.248	Nannospalax_galili
ENSDARG00000101222	oscp1a	98	77.119	ENSNBRG00000014306	oscp1a	96	77.119	Neolamprologus_brichardi
ENSDARG00000101222	oscp1a	99	70.000	ENSNLEG00000033754	LSM10	98	70.000	Nomascus_leucogenys
ENSDARG00000101222	oscp1a	100	71.074	ENSMEUG00000006313	LSM10	98	71.074	Notamacropus_eugenii
ENSDARG00000101222	oscp1a	100	68.595	ENSOPRG00000001699	LSM10	98	68.595	Ochotona_princeps
ENSDARG00000101222	oscp1a	100	71.074	ENSODEG00000019161	LSM10	98	71.074	Octodon_degus
ENSDARG00000101222	oscp1a	99	75.833	ENSONIG00000020904	oscp1a	98	75.833	Oreochromis_niloticus
ENSDARG00000101222	oscp1a	100	71.074	ENSOANG00000002066	LSM10	98	71.074	Ornithorhynchus_anatinus
ENSDARG00000101222	oscp1a	100	68.595	ENSOCUG00000005333	LSM10	98	68.595	Oryctolagus_cuniculus
ENSDARG00000101222	oscp1a	98	72.269	ENSORLG00000009504	oscp1a	98	72.269	Oryzias_latipes
ENSDARG00000101222	oscp1a	98	72.269	ENSORLG00020016201	oscp1a	98	72.269	Oryzias_latipes_hni
ENSDARG00000101222	oscp1a	98	73.729	ENSORLG00015007794	oscp1a	98	73.729	Oryzias_latipes_hsok
ENSDARG00000101222	oscp1a	100	74.380	ENSOGAG00000002653	LSM10	98	74.380	Otolemur_garnettii
ENSDARG00000101222	oscp1a	99	70.000	ENSOARG00000009596	LSM10	98	70.000	Ovis_aries
ENSDARG00000101222	oscp1a	99	70.000	ENSPPAG00000023465	LSM10	98	70.000	Pan_paniscus
ENSDARG00000101222	oscp1a	100	71.901	ENSPPRG00000014619	LSM10	98	71.901	Panthera_pardus
ENSDARG00000101222	oscp1a	100	71.901	ENSPTIG00000004613	LSM10	98	71.901	Panthera_tigris_altaica
ENSDARG00000101222	oscp1a	99	70.000	ENSPTRG00000000539	LSM10	98	70.000	Pan_troglodytes
ENSDARG00000101222	oscp1a	99	69.167	ENSPANG00000023172	LSM10	98	69.167	Papio_anubis
ENSDARG00000101222	oscp1a	99	76.667	ENSPKIG00000003728	oscp1a	97	76.667	Paramormyrops_kingsleyae
ENSDARG00000101222	oscp1a	100	67.769	ENSPSIG00000000590	LSM10	98	67.769	Pelodiscus_sinensis
ENSDARG00000101222	oscp1a	64	70.130	ENSPMGG00000015718	oscp1a	100	70.130	Periophthalmus_magnuspinnatus
ENSDARG00000101222	oscp1a	86	73.786	ENSPCIG00000014865	LSM10	76	73.786	Phascolarctos_cinereus
ENSDARG00000101222	oscp1a	98	67.797	ENSPFOG00000020490	oscp1a	100	67.797	Poecilia_formosa
ENSDARG00000101222	oscp1a	98	67.797	ENSPLAG00000016537	oscp1a	90	67.797	Poecilia_latipinna
ENSDARG00000101222	oscp1a	91	68.182	ENSPMEG00000000174	oscp1a	96	68.182	Poecilia_mexicana
ENSDARG00000101222	oscp1a	98	68.644	ENSPREG00000009899	oscp1a	90	68.644	Poecilia_reticulata
ENSDARG00000101222	oscp1a	99	70.000	ENSPPYG00000001539	LSM10	98	70.000	Pongo_abelii
ENSDARG00000101222	oscp1a	98	72.881	ENSPCAG00000002520	LSM10	98	72.881	Procavia_capensis
ENSDARG00000101222	oscp1a	100	71.074	ENSPVAG00000008644	LSM10	98	71.074	Pteropus_vampyrus
ENSDARG00000101222	oscp1a	98	76.271	ENSPNYG00000003138	oscp1a	96	76.271	Pundamilia_nyererei
ENSDARG00000101222	oscp1a	97	82.759	ENSPNAG00000028829	oscp1a	97	82.759	Pygocentrus_nattereri
ENSDARG00000101222	oscp1a	100	70.248	ENSRNOG00000025716	Lsm10	99	70.248	Rattus_norvegicus
ENSDARG00000101222	oscp1a	99	69.167	ENSRBIG00000001561	LSM10	98	69.167	Rhinopithecus_bieti
ENSDARG00000101222	oscp1a	99	69.167	ENSRROG00000011414	LSM10	98	69.167	Rhinopithecus_roxellana
ENSDARG00000101222	oscp1a	99	70.000	ENSSBOG00000036413	-	98	70.000	Saimiri_boliviensis_boliviensis
ENSDARG00000101222	oscp1a	100	71.074	ENSSHAG00000018056	LSM10	98	71.074	Sarcophilus_harrisii
ENSDARG00000101222	oscp1a	100	71.074	ENSSFOG00015019954	lsm10	100	70.492	Scleropages_formosus
ENSDARG00000101222	oscp1a	95	77.391	ENSSMAG00000001297	oscp1a	98	77.391	Scophthalmus_maximus
ENSDARG00000101222	oscp1a	96	73.276	ENSSDUG00000007090	oscp1a	94	73.276	Seriola_dumerili
ENSDARG00000101222	oscp1a	96	74.138	ENSSLDG00000000800	oscp1a	96	74.138	Seriola_lalandi_dorsalis
ENSDARG00000101222	oscp1a	89	74.766	ENSSARG00000004211	LSM10	98	70.732	Sorex_araneus
ENSDARG00000101222	oscp1a	97	74.359	ENSSPAG00000009229	oscp1a	97	74.359	Stegastes_partitus
ENSDARG00000101222	oscp1a	99	71.429	ENSSSCG00000038916	LSM10	98	71.429	Sus_scrofa
ENSDARG00000101222	oscp1a	100	66.116	ENSTGUG00000001602	-	99	66.116	Taeniopygia_guttata
ENSDARG00000101222	oscp1a	100	65.289	ENSTGUG00000001600	-	99	65.289	Taeniopygia_guttata
ENSDARG00000101222	oscp1a	100	71.074	ENSTRUG00000010531	oscp1a	98	71.074	Takifugu_rubripes
ENSDARG00000101222	oscp1a	99	70.000	ENSTBEG00000016674	LSM10	98	70.000	Tupaia_belangeri
ENSDARG00000101222	oscp1a	100	72.727	ENSUAMG00000020265	LSM10	98	72.727	Ursus_americanus
ENSDARG00000101222	oscp1a	100	72.727	ENSUMAG00000001438	LSM10	56	72.727	Ursus_maritimus
ENSDARG00000101222	oscp1a	100	72.727	ENSVVUG00000023209	LSM10	98	72.727	Vulpes_vulpes
ENSDARG00000101222	oscp1a	100	67.500	ENSXETG00000027631	lsm10	98	67.500	Xenopus_tropicalis
ENSDARG00000101222	oscp1a	98	68.067	ENSXCOG00000018776	oscp1a	75	68.067	Xiphophorus_couchianus
ENSDARG00000101222	oscp1a	91	68.182	ENSXMAG00000019963	oscp1a	88	68.182	Xiphophorus_maculatus