EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000101365 (Gene tree)
Gene ID: 100537352
Gene Symbol: si:cabz01021430.2
Alias: -
Full Name: si:cabz01021430.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 98506 bases
Position: chr4:73273857-73372362
Accession: ZDB-GENE-161017-89
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000143012	zf-C2H2	PF00096.26	3.2e-41	1	7
ENSDARP00000143012	zf-C2H2	PF00096.26	3.2e-41	2	7
ENSDARP00000143012	zf-C2H2	PF00096.26	3.2e-41	3	7
ENSDARP00000143012	zf-C2H2	PF00096.26	3.2e-41	4	7
ENSDARP00000143012	zf-C2H2	PF00096.26	3.2e-41	5	7
ENSDARP00000143012	zf-C2H2	PF00096.26	3.2e-41	6	7
ENSDARP00000143012	zf-C2H2	PF00096.26	3.2e-41	7	7
ENSDARP00000156898	zf-C2H2	PF00096.26	3.2e-41	1	7
ENSDARP00000156898	zf-C2H2	PF00096.26	3.2e-41	2	7
ENSDARP00000156898	zf-C2H2	PF00096.26	3.2e-41	3	7
ENSDARP00000156898	zf-C2H2	PF00096.26	3.2e-41	4	7
ENSDARP00000156898	zf-C2H2	PF00096.26	3.2e-41	5	7
ENSDARP00000156898	zf-C2H2	PF00096.26	3.2e-41	6	7
ENSDARP00000156898	zf-C2H2	PF00096.26	3.2e-41	7	7
ENSDARP00000143050	zf-C2H2	PF00096.26	3.9e-13	1	2
ENSDARP00000143050	zf-C2H2	PF00096.26	3.9e-13	2	2
ENSDARP00000143012	zf-met	PF12874.7	1.5e-06	1	2
ENSDARP00000143012	zf-met	PF12874.7	1.5e-06	2	2
ENSDARP00000156898	zf-met	PF12874.7	1.5e-06	1	2
ENSDARP00000156898	zf-met	PF12874.7	1.5e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000182312	-	1184	-	ENSDARP00000156898	298 (aa)	-	A0A2R8QQ87
ENSDART00000174178	-	3842	XM_003201487	ENSDARP00000143012	298 (aa)	XP_003201535	A0A0G2KZL7
ENSDART00000174198	-	532	XM_005174401	ENSDARP00000143050	141 (aa)	XP_005174458	A0A1L1QZD2

Gene Model

Click here to download ENSDARG00000101365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000101365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000101365	si:cabz01021430.2	100	53.448	ENSDARG00000101137	znf999	100	52.336
ENSDARG00000101365	si:cabz01021430.2	99	55.497	ENSDARG00000096856	znf1012	100	52.427
ENSDARG00000101365	si:cabz01021430.2	100	50.847	ENSDARG00000112103	si:dkey-16p19.1	99	44.375
ENSDARG00000101365	si:cabz01021430.2	100	52.632	ENSDARG00000091393	si:ch211-161m3.6	96	48.582
ENSDARG00000101365	si:cabz01021430.2	100	54.386	ENSDARG00000089598	si:cabz01054396.2	100	51.462
ENSDARG00000101365	si:cabz01021430.2	100	51.724	ENSDARG00000102791	zgc:174704	99	50.502
ENSDARG00000101365	si:cabz01021430.2	100	52.632	ENSDARG00000098087	si:dkey-30f3.2	99	50.167
ENSDARG00000101365	si:cabz01021430.2	100	54.237	ENSDARG00000102561	AL645691.1	97	48.936
ENSDARG00000101365	si:cabz01021430.2	100	54.286	ENSDARG00000102837	znf1145	100	51.980
ENSDARG00000101365	si:cabz01021430.2	100	55.172	ENSDARG00000114437	zgc:173705	99	52.189
ENSDARG00000101365	si:cabz01021430.2	100	53.448	ENSDARG00000102008	si:dkey-72l17.6	99	47.368
ENSDARG00000101365	si:cabz01021430.2	99	42.857	ENSDARG00000113971	LO018181.1	91	45.872
ENSDARG00000101365	si:cabz01021430.2	98	53.448	ENSDARG00000074298	znf1015	99	52.083
ENSDARG00000101365	si:cabz01021430.2	99	46.809	ENSDARG00000087453	si:ch73-57f22.2	88	49.533
ENSDARG00000101365	si:cabz01021430.2	100	56.364	ENSDARG00000099245	CABZ01081752.1	94	42.295
ENSDARG00000101365	si:cabz01021430.2	100	51.020	ENSDARG00000075417	zgc:175107	98	48.905
ENSDARG00000101365	si:cabz01021430.2	100	53.448	ENSDARG00000097812	si:ch73-144d13.5	99	46.538
ENSDARG00000101365	si:cabz01021430.2	100	51.724	ENSDARG00000111550	CABZ01002702.1	98	49.091
ENSDARG00000101365	si:cabz01021430.2	100	49.462	ENSDARG00000096828	si:ch73-144d13.7	99	49.462
ENSDARG00000101365	si:cabz01021430.2	99	48.026	ENSDARG00000089715	si:cabz01054394.7	99	48.026
ENSDARG00000101365	si:cabz01021430.2	99	52.857	ENSDARG00000074365	zgc:171901	99	53.409
ENSDARG00000101365	si:cabz01021430.2	100	50.847	ENSDARG00000114793	CU182823.4	98	47.059
ENSDARG00000101365	si:cabz01021430.2	100	55.172	ENSDARG00000113808	si:dkeyp-82b4.6	96	45.614
ENSDARG00000101365	si:cabz01021430.2	99	49.158	ENSDARG00000104887	znf1105	96	49.158
ENSDARG00000101365	si:cabz01021430.2	100	49.153	ENSDARG00000103721	si:dkey-122c11.7	99	45.625
ENSDARG00000101365	si:cabz01021430.2	100	45.098	ENSDARG00000105696	CABZ01021433.1	99	48.387
ENSDARG00000101365	si:cabz01021430.2	100	58.621	ENSDARG00000105692	CABZ01069022.1	97	48.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000101365	si:cabz01021430.2	98	47.929	ENSAPOG00000018490	-	55	44.670	Acanthochromis_polyacanthus
ENSDARG00000101365	si:cabz01021430.2	98	48.521	ENSACIG00000006806	-	75	45.178	Amphilophus_citrinellus
ENSDARG00000101365	si:cabz01021430.2	98	49.239	ENSATEG00000011195	-	66	44.670	Anabas_testudineus
ENSDARG00000101365	si:cabz01021430.2	98	50.000	ENSATEG00000008320	-	96	46.948	Anabas_testudineus
ENSDARG00000101365	si:cabz01021430.2	87	47.929	ENSACLG00000006870	-	64	46.269	Astatotilapia_calliptera
ENSDARG00000101365	si:cabz01021430.2	94	47.059	ENSCVAG00000008836	-	82	47.059	Cyprinodon_variegatus
ENSDARG00000101365	si:cabz01021430.2	80	47.651	ENSCVAG00000020745	-	76	39.189	Cyprinodon_variegatus
ENSDARG00000101365	si:cabz01021430.2	76	45.109	ENSCVAG00000004382	-	87	45.109	Cyprinodon_variegatus
ENSDARG00000101365	si:cabz01021430.2	92	41.379	ENSFHEG00000021815	-	68	40.514	Fundulus_heteroclitus
ENSDARG00000101365	si:cabz01021430.2	75	46.231	ENSFHEG00000000766	-	67	46.231	Fundulus_heteroclitus
ENSDARG00000101365	si:cabz01021430.2	67	48.485	ENSFHEG00000011468	-	65	42.657	Fundulus_heteroclitus
ENSDARG00000101365	si:cabz01021430.2	92	44.324	ENSFHEG00000004728	-	93	47.549	Fundulus_heteroclitus
ENSDARG00000101365	si:cabz01021430.2	96	50.000	ENSFHEG00000013225	-	66	50.000	Fundulus_heteroclitus
ENSDARG00000101365	si:cabz01021430.2	99	50.877	ENSFHEG00000022145	-	67	46.528	Fundulus_heteroclitus
ENSDARG00000101365	si:cabz01021430.2	99	52.326	ENSFHEG00000006007	-	63	52.326	Fundulus_heteroclitus
ENSDARG00000101365	si:cabz01021430.2	82	51.121	ENSFHEG00000018255	-	94	51.121	Fundulus_heteroclitus
ENSDARG00000101365	si:cabz01021430.2	92	51.163	ENSFHEG00000018619	-	74	51.163	Fundulus_heteroclitus
ENSDARG00000101365	si:cabz01021430.2	77	55.172	ENSGMOG00000020149	si:dkeyp-113d7.1	100	49.761	Gadus_morhua
ENSDARG00000101365	si:cabz01021430.2	81	43.448	ENSGAFG00000013438	-	85	43.030	Gambusia_affinis
ENSDARG00000101365	si:cabz01021430.2	75	42.273	ENSGAFG00000011287	-	55	42.273	Gambusia_affinis
ENSDARG00000101365	si:cabz01021430.2	70	52.542	ENSGAFG00000013116	-	64	46.231	Gambusia_affinis
ENSDARG00000101365	si:cabz01021430.2	96	42.014	ENSGAFG00000020501	-	67	40.278	Gambusia_affinis
ENSDARG00000101365	si:cabz01021430.2	87	47.929	ENSHBUG00000015226	-	55	46.269	Haplochromis_burtoni
ENSDARG00000101365	si:cabz01021430.2	97	44.076	ENSHBUG00000002841	-	88	43.363	Haplochromis_burtoni
ENSDARG00000101365	si:cabz01021430.2	99	36.782	ENSLBEG00000000435	-	82	46.053	Labrus_bergylta
ENSDARG00000101365	si:cabz01021430.2	87	48.223	ENSMAMG00000022154	-	62	46.324	Mastacembelus_armatus
ENSDARG00000101365	si:cabz01021430.2	80	44.770	ENSMZEG00005011072	-	74	44.770	Maylandia_zebra
ENSDARG00000101365	si:cabz01021430.2	93	47.929	ENSMZEG00005012348	-	85	44.755	Maylandia_zebra
ENSDARG00000101365	si:cabz01021430.2	96	53.448	ENSMALG00000010369	-	90	46.429	Monopterus_albus
ENSDARG00000101365	si:cabz01021430.2	87	47.929	ENSNBRG00000021375	-	55	46.269	Neolamprologus_brichardi
ENSDARG00000101365	si:cabz01021430.2	97	44.248	ENSOMEG00000023774	-	83	42.683	Oryzias_melastigma
ENSDARG00000101365	si:cabz01021430.2	88	48.689	ENSPFOG00000007847	-	63	48.689	Poecilia_formosa
ENSDARG00000101365	si:cabz01021430.2	99	47.590	ENSPFOG00000015553	-	82	47.222	Poecilia_formosa
ENSDARG00000101365	si:cabz01021430.2	100	41.961	ENSPLAG00000008610	-	85	41.961	Poecilia_latipinna
ENSDARG00000101365	si:cabz01021430.2	78	46.512	ENSPLAG00000007596	-	83	46.512	Poecilia_latipinna
ENSDARG00000101365	si:cabz01021430.2	76	55.224	ENSPMEG00000017986	-	100	55.224	Poecilia_mexicana
ENSDARG00000101365	si:cabz01021430.2	99	52.792	ENSPMEG00000016478	-	95	52.792	Poecilia_mexicana
ENSDARG00000101365	si:cabz01021430.2	80	41.837	ENSPMEG00000009218	-	52	41.837	Poecilia_mexicana
ENSDARG00000101365	si:cabz01021430.2	91	50.289	ENSPREG00000001952	-	97	50.289	Poecilia_reticulata
ENSDARG00000101365	si:cabz01021430.2	91	49.550	ENSPREG00000004728	-	83	52.551	Poecilia_reticulata
ENSDARG00000101365	si:cabz01021430.2	75	46.701	ENSPNAG00000007266	-	98	46.701	Pygocentrus_nattereri
ENSDARG00000101365	si:cabz01021430.2	93	44.170	ENSSLDG00000000352	-	80	44.170	Seriola_lalandi_dorsalis
ENSDARG00000101365	si:cabz01021430.2	75	46.875	ENSSPAG00000004449	-	79	46.875	Stegastes_partitus
ENSDARG00000101365	si:cabz01021430.2	80	47.059	ENSXCOG00000008062	-	98	46.781	Xiphophorus_couchianus
ENSDARG00000101365	si:cabz01021430.2	74	52.632	ENSXCOG00000007420	-	95	52.632	Xiphophorus_couchianus
ENSDARG00000101365	si:cabz01021430.2	80	46.479	ENSXCOG00000014363	-	61	46.479	Xiphophorus_couchianus
ENSDARG00000101365	si:cabz01021430.2	92	45.596	ENSXMAG00000025234	-	70	46.970	Xiphophorus_maculatus
ENSDARG00000101365	si:cabz01021430.2	93	39.381	ENSXMAG00000023196	-	100	39.381	Xiphophorus_maculatus
ENSDARG00000101365	si:cabz01021430.2	99	45.146	ENSXMAG00000023893	-	93	44.048	Xiphophorus_maculatus
ENSDARG00000101365	si:cabz01021430.2	89	51.531	ENSXMAG00000028681	-	81	51.531	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function