EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000101425 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-1b17.5
Alias: -
Full Name: si:dkey-1b17.5
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7040 bases
Position: chr22:1668471-1675510
Accession: ZDB-GENE-050208-704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000134551	zf-C2H2	PF00096.26	3.3e-19	1	4
ENSDARP00000134551	zf-C2H2	PF00096.26	3.3e-19	2	4
ENSDARP00000134551	zf-C2H2	PF00096.26	3.3e-19	3	4
ENSDARP00000134551	zf-C2H2	PF00096.26	3.3e-19	4	4
ENSDARP00000134551	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000163358	-	592	XM_009295813	ENSDARP00000134551	198 (aa)	XP_009294088	A0A0R4IJT0

Gene Model

Click here to download ENSDARG00000101425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000101425's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000101425	si:dkey-1b17.5	90	62.360	ENSDARG00000115326	znf1002	99	64.433
ENSDARG00000101425	si:dkey-1b17.5	85	58.580	ENSDARG00000077085	zgc:110821	96	58.580
ENSDARG00000101425	si:dkey-1b17.5	98	62.887	ENSDARG00000112141	znf1169	91	63.918
ENSDARG00000101425	si:dkey-1b17.5	85	55.238	ENSDARG00000094736	znf1157	95	68.421
ENSDARG00000101425	si:dkey-1b17.5	89	64.773	ENSDARG00000094343	si:dkey-20i20.8	84	64.773
ENSDARG00000101425	si:dkey-1b17.5	78	49.032	ENSDARG00000077712	zgc:113886	88	46.012
ENSDARG00000101425	si:dkey-1b17.5	82	59.259	ENSDARG00000095455	si:dkey-20i20.10	78	58.537
ENSDARG00000101425	si:dkey-1b17.5	97	69.444	ENSDARG00000102053	znf1164	100	70.588
ENSDARG00000101425	si:dkey-1b17.5	92	66.272	ENSDARG00000092088	si:dkey-4c15.8	99	68.421
ENSDARG00000101425	si:dkey-1b17.5	89	53.107	ENSDARG00000098898	si:ch211-255f4.2	100	53.107
ENSDARG00000101425	si:dkey-1b17.5	91	66.854	ENSDARG00000098613	si:dkey-15h8.16	96	66.495
ENSDARG00000101425	si:dkey-1b17.5	87	62.500	ENSDARG00000100587	zgc:113886	100	45.860
ENSDARG00000101425	si:dkey-1b17.5	70	64.748	ENSDARG00000095704	si:dkey-4c15.13	97	70.085
ENSDARG00000101425	si:dkey-1b17.5	77	66.447	ENSDARG00000071833	znf1162	100	66.447
ENSDARG00000101425	si:dkey-1b17.5	85	58.929	ENSDARG00000071725	znf1167	99	58.929
ENSDARG00000101425	si:dkey-1b17.5	75	54.310	ENSDARG00000014775	zgc:113220	73	51.479
ENSDARG00000101425	si:dkey-1b17.5	85	59.756	ENSDARG00000071714	znf983	97	59.036
ENSDARG00000101425	si:dkey-1b17.5	83	60.366	ENSDARG00000101885	si:dkey-20i20.11	99	59.639
ENSDARG00000101425	si:dkey-1b17.5	88	58.621	ENSDARG00000088507	znf982	89	57.831
ENSDARG00000101425	si:dkey-1b17.5	69	56.618	ENSDARG00000093672	zgc:171435	100	64.957
ENSDARG00000101425	si:dkey-1b17.5	85	59.391	ENSDARG00000094309	si:ch73-92e7.6	100	66.265
ENSDARG00000101425	si:dkey-1b17.5	84	68.675	ENSDARG00000099618	si:dkey-1b17.6	98	68.675
ENSDARG00000101425	si:dkey-1b17.5	88	62.286	ENSDARG00000092246	si:dkey-20i20.3	88	62.286
ENSDARG00000101425	si:dkey-1b17.5	93	66.851	ENSDARG00000100361	znf1174	98	68.229
ENSDARG00000101425	si:dkey-1b17.5	98	62.500	ENSDARG00000093562	si:dkey-20i20.7	95	61.856
ENSDARG00000101425	si:dkey-1b17.5	98	60.914	ENSDARG00000092027	si:dkey-20i20.9	94	60.377
ENSDARG00000101425	si:dkey-1b17.5	76	64.667	ENSDARG00000093875	zgc:174224	85	63.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000101425	si:dkey-1b17.5	72	44.218	ENSSDUG00000008682	-	99	45.833	Seriola_dumerili