EuRBPDB

Description
Ensembl ID
ENSDARG00000101472 (Gene tree)
Gene ID
553787
Gene Symbol
pop4
Alias
zgc:110597
Full Name
POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
7875 bases
Position
chr7:45963767-45971641
Accession
ZDB-GENE-050522-505
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSDARP00000137725UPF0086PF01868.161.7e-2611
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSDART00000167670-941-ENSDARP0000014162243 (aa)-A0A0R4IWU0
ENSDART00000163098-1069XM_005166455ENSDARP00000137725219 (aa)XP_005166512A0A0R4ITA6
ENSDART00000165691-389--- (aa)--
Gene Model
Pathways
Pathway ID
Pathway Name
Source
dre03008Ribosome biogenesis in eukaryotesKEGG
dre03013RNA transportKEGG
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSDARG00000101472pop410063.182ENSG00000105171POP410078.125Homo_sapiens
ENSDARG00000101472pop49354.762ENSAMEG00000003172-9355.122Ailuropoda_melanoleuca
ENSDARG00000101472pop49264.851ENSAMEG00000018329-9264.851Ailuropoda_melanoleuca
ENSDARG00000101472pop49965.297ENSACIG00000008358pop49766.990Amphilophus_citrinellus
ENSDARG00000101472pop49071.144ENSAOCG00000010116pop49870.647Amphiprion_ocellaris
ENSDARG00000101472pop49967.873ENSAPEG00000002829pop49367.421Amphiprion_percula
ENSDARG00000101472pop410067.568ENSATEG00000013028pop410067.117Anabas_testudineus
ENSDARG00000101472pop49262.871ENSAPLG00000014051POP49862.871Anas_platyrhynchos
ENSDARG00000101472pop49268.812ENSANAG00000020295POP49268.812Aotus_nancymaae
ENSDARG00000101472pop49967.123ENSACLG00000000526pop49967.123Astatotilapia_calliptera
ENSDARG00000101472pop49777.570ENSAMXG00000002899pop49777.570Astyanax_mexicanus
ENSDARG00000101472pop410062.727ENSBTAG00000002223POP410062.727Bos_taurus
ENSDARG00000101472pop49266.995ENSCJAG00000046750POP410070.000Callithrix_jacchus
ENSDARG00000101472pop48365.934ENSCAFG00000007630POP410065.934Canis_familiaris
ENSDARG00000101472pop48868.041ENSCHIG00000016743POP48868.041Capra_hircus
ENSDARG00000101472pop410062.273ENSTSYG00000003488POP410062.273Carlito_syrichta
ENSDARG00000101472pop49250.000ENSCAPG00000011105POP49150.000Cavia_aperea
ENSDARG00000101472pop410063.182ENSCPOG00000002992POP410063.182Cavia_porcellus
ENSDARG00000101472pop49267.822ENSCCAG00000020285-9267.822Cebus_capucinus
ENSDARG00000101472pop48660.317ENSCCAG00000034244-8760.317Cebus_capucinus
ENSDARG00000101472pop48871.134ENSCATG00000036022POP410078.125Cercocebus_atys
ENSDARG00000101472pop48867.526ENSCLAG00000013162POP410060.909Chinchilla_lanigera
ENSDARG00000101472pop48870.619ENSCSAG00000004868POP48970.619Chlorocebus_sabaeus
ENSDARG00000101472pop49049.254ENSCHOG00000002071POP49349.254Choloepus_hoffmanni
ENSDARG00000101472pop410065.000ENSCPBG00000016132POP410065.000Chrysemys_picta_bellii
ENSDARG00000101472pop48431.414ENSCING00000023871-9430.208Ciona_intestinalis
ENSDARG00000101472pop48870.619ENSCANG00000005924POP49670.619Colobus_angolensis_palliatus
ENSDARG00000101472pop48865.285ENSCGRG00001017185Pop48865.285Cricetulus_griseus_chok1gshd
ENSDARG00000101472pop48865.285ENSCGRG00000008155Pop48865.285Cricetulus_griseus_crigri
ENSDARG00000101472pop49961.468ENSCSEG00000002946pop49961.927Cynoglossus_semilaevis
ENSDARG00000101472pop49748.611ENSCVAG00000018602POP49347.685Cyprinodon_variegatus
ENSDARG00000101472pop410062.727ENSDNOG00000047663POP48862.727Dasypus_novemcinctus
ENSDARG00000101472pop46864.430ENSDORG00000008577Pop48764.430Dipodomys_ordii
ENSDARG00000101472pop46935.849FBgn0035831CG80387037.241Drosophila_melanogaster
ENSDARG00000101472pop49952.074ENSETEG00000003607POP410052.074Echinops_telfairi
ENSDARG00000101472pop48841.346ENSEBUG00000004305pop49040.865Eptatretus_burgeri
ENSDARG00000101472pop49545.133ENSEBUG00000010447pop48844.690Eptatretus_burgeri
ENSDARG00000101472pop49939.631ENSEBUG00000008575pop49939.631Eptatretus_burgeri
ENSDARG00000101472pop410073.077ENSECAG00000020206POP48273.077Equus_caballus
ENSDARG00000101472pop48852.062ENSEEUG00000013109POP49752.062Erinaceus_europaeus
ENSDARG00000101472pop410071.689ENSELUG00000019812pop410071.689Esox_lucius
ENSDARG00000101472pop410061.818ENSFCAG00000001619POP410061.818Felis_catus
ENSDARG00000101472pop49861.111ENSFALG00000000206POP49661.111Ficedula_albicollis
ENSDARG00000101472pop48868.557ENSFDAG00000017859POP48868.557Fukomys_damarensis
ENSDARG00000101472pop49858.716ENSFHEG00000012745pop49858.257Fundulus_heteroclitus
ENSDARG00000101472pop48770.619ENSGMOG00000000335pop49670.619Gadus_morhua
ENSDARG00000101472pop410060.000ENSGALG00000041972POP49260.000Gallus_gallus
ENSDARG00000101472pop47954.802ENSGAFG00000003571pop49854.237Gambusia_affinis
ENSDARG00000101472pop49964.732ENSGACG00000014510pop49473.410Gasterosteus_aculeatus
ENSDARG00000101472pop410065.909ENSGAGG00000024544POP47965.909Gopherus_agassizii
ENSDARG00000101472pop49268.317ENSGGOG00000038346POP49268.317Gorilla_gorilla
ENSDARG00000101472pop49966.667ENSHBUG00000021821pop49966.667Haplochromis_burtoni
ENSDARG00000101472pop48869.072ENSHGLG00000015798POP48869.072Heterocephalus_glaber_female
ENSDARG00000101472pop410062.727ENSHGLG00100009737POP410062.727Heterocephalus_glaber_male
ENSDARG00000101472pop49964.384ENSHCOG00000020937pop49964.384Hippocampus_comes
ENSDARG00000101472pop410071.818ENSIPUG00000013652pop410071.818Ictalurus_punctatus
ENSDARG00000101472pop410063.182ENSSTOG00000011016POP410063.182Ictidomys_tridecemlineatus
ENSDARG00000101472pop48866.495ENSJJAG00000013376Pop48866.495Jaculus_jaculus
ENSDARG00000101472pop49966.516ENSKMAG00000012250pop49965.611Kryptolebias_marmoratus
ENSDARG00000101472pop49962.443ENSLBEG00000018846-9962.896Labrus_bergylta
ENSDARG00000101472pop49962.896ENSLBEG00000014139pop49963.348Labrus_bergylta
ENSDARG00000101472pop49956.682ENSLACG00000008581POP49857.143Latimeria_chalumnae
ENSDARG00000101472pop410068.636ENSLOCG00000005597pop410069.231Lepisosteus_oculatus
ENSDARG00000101472pop410061.818ENSLAFG00000000084POP410061.818Loxodonta_africana
ENSDARG00000101472pop48870.619ENSMFAG00000029606POP410063.636Macaca_fascicularis
ENSDARG00000101472pop48869.231ENSMMUG00000017424POP410062.443Macaca_mulatta
ENSDARG00000101472pop48869.744ENSMNEG00000031374POP410062.896Macaca_nemestrina
ENSDARG00000101472pop48870.103ENSMLEG00000043454POP410063.182Mandrillus_leucophaeus
ENSDARG00000101472pop49969.683ENSMAMG00000011716pop49968.778Mastacembelus_armatus
ENSDARG00000101472pop49967.123ENSMZEG00005002360pop49967.123Maylandia_zebra
ENSDARG00000101472pop49958.525ENSMGAG00000005337POP49758.371Meleagris_gallopavo
ENSDARG00000101472pop48866.495ENSMAUG00000020110Pop48866.495Mesocricetus_auratus
ENSDARG00000101472pop49364.216ENSMICG00000035730POP49164.216Microcebus_murinus
ENSDARG00000101472pop49965.596ENSMMOG00000015321pop49964.220Mola_mola
ENSDARG00000101472pop49962.557ENSMODG00000029406POP49563.470Monodelphis_domestica
ENSDARG00000101472pop49967.123ENSMALG00000012571pop49968.037Monopterus_albus
ENSDARG00000101472pop48865.128MGP_CAROLIEiJ_G0029600Pop48864.500Mus_caroli
ENSDARG00000101472pop48864.796ENSMUSG00000030423Pop48863.636Mus_musculus
ENSDARG00000101472pop48865.285MGP_SPRETEiJ_G0030699Pop48865.285Mus_spretus
ENSDARG00000101472pop410060.909ENSMPUG00000008041-10060.909Mustela_putorius_furo
ENSDARG00000101472pop49356.311ENSMPUG00000008063-9555.556Mustela_putorius_furo
ENSDARG00000101472pop49351.707ENSMLUG00000010774POP49351.707Myotis_lucifugus
ENSDARG00000101472pop45772.000ENSMEUG00000003636-10072.000Notamacropus_eugenii
ENSDARG00000101472pop48869.588ENSOPRG00000004736POP49769.588Ochotona_princeps
ENSDARG00000101472pop48869.072ENSODEG00000013025POP49269.072Octodon_degus
ENSDARG00000101472pop49966.667ENSONIG00000003458pop49766.667Oreochromis_niloticus
ENSDARG00000101472pop48870.103ENSOCUG00000015974POP48870.103Oryctolagus_cuniculus
ENSDARG00000101472pop49960.181ENSORLG00000020317pop49959.729Oryzias_latipes
ENSDARG00000101472pop49961.086ENSORLG00015011624pop49960.633Oryzias_latipes_hsok
ENSDARG00000101472pop49960.633ENSOMEG00000002538pop49959.729Oryzias_melastigma
ENSDARG00000101472pop49365.686ENSOGAG00000011168POP49365.686Otolemur_garnettii
ENSDARG00000101472pop48868.041ENSOARG00000004041POP48868.041Ovis_aries
ENSDARG00000101472pop410063.636ENSPPAG00000040372POP410063.636Pan_paniscus
ENSDARG00000101472pop410061.818ENSPPRG00000010502POP410061.818Panthera_pardus
ENSDARG00000101472pop410061.818ENSPTIG00000016598POP410061.818Panthera_tigris_altaica
ENSDARG00000101472pop410063.636ENSPTRG00000010779POP410063.636Pan_troglodytes
ENSDARG00000101472pop48870.619ENSPANG00000008546POP410063.636Papio_anubis
ENSDARG00000101472pop49272.059ENSPKIG00000004468pop48972.059Paramormyrops_kingsleyae
ENSDARG00000101472pop49966.359ENSPSIG00000015690POP410069.307Pelodiscus_sinensis
ENSDARG00000101472pop49258.654ENSPMGG00000008608pop49959.615Periophthalmus_magnuspinnatus
ENSDARG00000101472pop49764.319ENSPEMG00000014034-9564.319Peromyscus_maniculatus_bairdii
ENSDARG00000101472pop48856.186ENSPEMG00000019982-8756.122Peromyscus_maniculatus_bairdii
ENSDARG00000101472pop46666.207ENSPMAG00000006265pop47366.207Petromyzon_marinus
ENSDARG00000101472pop410062.273ENSPCIG00000024738POP49562.273Phascolarctos_cinereus
ENSDARG00000101472pop49760.930ENSPFOG00000000925pop49760.930Poecilia_formosa
ENSDARG00000101472pop49760.930ENSPLAG00000003161pop49760.930Poecilia_latipinna
ENSDARG00000101472pop49760.930ENSPMEG00000002475pop49760.930Poecilia_mexicana
ENSDARG00000101472pop49760.465ENSPREG00000022403pop49160.465Poecilia_reticulata
ENSDARG00000101472pop410063.636ENSPPYG00000009805POP410063.636Pongo_abelii
ENSDARG00000101472pop48864.948ENSPCAG00000007737POP48864.948Procavia_capensis
ENSDARG00000101472pop410062.273ENSPCOG00000018055POP410062.273Propithecus_coquereli
ENSDARG00000101472pop49364.390ENSPVAG00000006069POP410060.181Pteropus_vampyrus
ENSDARG00000101472pop49967.123ENSPNYG00000020038pop49967.123Pundamilia_nyererei
ENSDARG00000101472pop410075.000ENSPNAG00000005591pop410074.545Pygocentrus_nattereri
ENSDARG00000101472pop48865.641ENSRNOG00000027646Pop48865.000Rattus_norvegicus
ENSDARG00000101472pop47264.151ENSRBIG00000044769POP48968.116Rhinopithecus_bieti
ENSDARG00000101472pop48870.619ENSRROG00000028903POP410063.636Rhinopithecus_roxellana
ENSDARG00000101472pop45833.813YBR257W-5033.813Saccharomyces_cerevisiae
ENSDARG00000101472pop49268.317ENSSBOG00000032445POP49268.317Saimiri_boliviensis_boliviensis
ENSDARG00000101472pop49366.019ENSSHAG00000016888POP49365.534Sarcophilus_harrisii
ENSDARG00000101472pop49968.349ENSSFOG00015014556pop49868.349Scleropages_formosus
ENSDARG00000101472pop49969.683ENSSMAG00000016611pop49968.778Scophthalmus_maximus
ENSDARG00000101472pop49966.516ENSSDUG00000019865pop48965.611Seriola_dumerili
ENSDARG00000101472pop49966.516ENSSLDG00000001763pop49965.611Seriola_lalandi_dorsalis
ENSDARG00000101472pop48869.072ENSSARG00000004748POP49466.667Sorex_araneus
ENSDARG00000101472pop49968.326ENSSPAG00000014364pop49967.873Stegastes_partitus
ENSDARG00000101472pop410062.273ENSSSCG00000002854POP410062.273Sus_scrofa
ENSDARG00000101472pop49065.327ENSTGUG00000008953POP49965.327Taeniopygia_guttata
ENSDARG00000101472pop49267.488ENSTNIG00000006401pop410067.488Tetraodon_nigroviridis
ENSDARG00000101472pop48869.231ENSTBEG00000002194POP410062.443Tupaia_belangeri
ENSDARG00000101472pop49069.154ENSTTRG00000005882POP49169.154Tursiops_truncatus
ENSDARG00000101472pop410060.455ENSUAMG00000003049-10060.455Ursus_americanus
ENSDARG00000101472pop410060.455ENSUMAG00000007522-10060.455Ursus_maritimus
ENSDARG00000101472pop49463.768ENSVVUG00000016876-7263.768Vulpes_vulpes
ENSDARG00000101472pop49661.137ENSXETG00000017598pop49661.137Xenopus_tropicalis
ENSDARG00000101472pop49960.811ENSXCOG00000017695pop49360.360Xiphophorus_couchianus
ENSDARG00000101472pop49960.811ENSXMAG00000013862pop49360.360Xiphophorus_maculatus
Gene Ontology
Go ID
Go_term
PubmedID
Evidence
Category
GO:0000171ribonuclease MRP activity21873635.IBAFunction
GO:0000172ribonuclease MRP complex21873635.IBAComponent
GO:0003723RNA binding-IEAFunction
GO:0004526ribonuclease P activity21873635.IBAFunction
GO:0004526ribonuclease P activity-IEAFunction
GO:0004540ribonuclease activity-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0005730nucleolus-IEAComponent
GO:0006364rRNA processing21873635.IBAProcess
GO:0006396RNA processing-IEAProcess
GO:0008033tRNA processing-IEAProcess
GO:0030677ribonuclease P complex21873635.IBAComponent
GO:0030677ribonuclease P complex-IEAComponent
GO:0033204ribonuclease P RNA binding21873635.IBAFunction