EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000101569 (Gene tree)
Gene ID: 555906
Gene Symbol: ppargc1b
Alias: fb55c08|perc1b|sb:cb520|si:bz1d10.4|wu:fb55c08
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator 1 beta
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 66849 bases
Position: chr14:24934736-25001584
Accession: ZDB-GENE-030616-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000148975	RRM_1	PF00076.22	3.9e-05	1	1
ENSDARP00000132754	RRM_1	PF00076.22	4.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000191821	-	2752	-	ENSDARP00000148975	786 (aa)	-	A0A2R8RN05
ENSDART00000170871	-	7020	XM_009291061	ENSDARP00000132754	847 (aa)	XP_009289336	A0A0R4IGS9

Gene Model

Click here to download ENSDARG00000101569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000101569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000101569	ppargc1b	79	43.651	ENSG00000155846	PPARGC1B	61	42.063	Homo_sapiens
ENSDARG00000101569	ppargc1b	54	40.984	ENSG00000109819	PPARGC1A	70	34.694	Homo_sapiens
ENSDARG00000101569	ppargc1b	54	40.984	ENSAMEG00000010421	PPARGC1A	62	40.984	Ailuropoda_melanoleuca
ENSDARG00000101569	ppargc1b	52	40.164	ENSAPLG00000005303	PPARGC1A	56	40.602	Anas_platyrhynchos
ENSDARG00000101569	ppargc1b	50	35.169	ENSAPLG00000009977	PPARGC1B	68	33.141	Anas_platyrhynchos
ENSDARG00000101569	ppargc1b	78	38.425	ENSACAG00000015737	PPARGC1B	81	43.089	Anolis_carolinensis
ENSDARG00000101569	ppargc1b	59	39.344	ENSACAG00000000741	PPARGC1A	60	40.136	Anolis_carolinensis
ENSDARG00000101569	ppargc1b	62	39.073	ENSANAG00000021830	PPARGC1B	61	41.270	Aotus_nancymaae
ENSDARG00000101569	ppargc1b	54	40.984	ENSANAG00000035930	PPARGC1A	61	40.984	Aotus_nancymaae
ENSDARG00000101569	ppargc1b	100	96.296	ENSAMXG00000010665	ppargc1b	93	96.296	Astyanax_mexicanus
ENSDARG00000101569	ppargc1b	76	39.860	ENSBTAG00000012943	PPARGC1B	84	35.948	Bos_taurus
ENSDARG00000101569	ppargc1b	52	40.984	ENSBTAG00000017024	PPARGC1A	57	41.045	Bos_taurus
ENSDARG00000101569	ppargc1b	74	42.063	ENSCJAG00000021113	PPARGC1B	51	41.270	Callithrix_jacchus
ENSDARG00000101569	ppargc1b	54	40.984	ENSCJAG00000013024	PPARGC1A	62	40.984	Callithrix_jacchus
ENSDARG00000101569	ppargc1b	54	40.984	ENSCAFG00000016519	PPARGC1A	61	40.984	Canis_familiaris
ENSDARG00000101569	ppargc1b	76	40.411	ENSCAFG00000018275	PPARGC1B	62	40.411	Canis_familiaris
ENSDARG00000101569	ppargc1b	54	40.984	ENSCAFG00020027242	PPARGC1A	63	40.984	Canis_lupus_dingo
ENSDARG00000101569	ppargc1b	74	40.411	ENSCAFG00020023524	PPARGC1B	60	40.411	Canis_lupus_dingo
ENSDARG00000101569	ppargc1b	52	40.984	ENSCHIG00000015991	PPARGC1A	57	40.984	Capra_hircus
ENSDARG00000101569	ppargc1b	74	42.400	ENSCHIG00000004409	PPARGC1B	63	42.400	Capra_hircus
ENSDARG00000101569	ppargc1b	77	39.597	ENSTSYG00000034354	PPARGC1B	68	39.597	Carlito_syrichta
ENSDARG00000101569	ppargc1b	54	40.984	ENSTSYG00000010439	PPARGC1A	61	40.984	Carlito_syrichta
ENSDARG00000101569	ppargc1b	67	53.846	ENSCAPG00000008859	PPARGC1B	61	41.667	Cavia_aperea
ENSDARG00000101569	ppargc1b	54	40.984	ENSCPOG00000001518	PPARGC1A	62	40.984	Cavia_porcellus
ENSDARG00000101569	ppargc1b	79	39.053	ENSCPOG00000001958	PPARGC1B	64	41.667	Cavia_porcellus
ENSDARG00000101569	ppargc1b	74	41.270	ENSCCAG00000026909	PPARGC1B	61	41.270	Cebus_capucinus
ENSDARG00000101569	ppargc1b	56	40.984	ENSCCAG00000024681	PPARGC1A	62	40.984	Cebus_capucinus
ENSDARG00000101569	ppargc1b	54	40.984	ENSCATG00000032575	PPARGC1A	62	40.984	Cercocebus_atys
ENSDARG00000101569	ppargc1b	80	40.141	ENSCATG00000030402	PPARGC1B	66	40.984	Cercocebus_atys
ENSDARG00000101569	ppargc1b	76	39.583	ENSCLAG00000015452	PPARGC1B	62	39.583	Chinchilla_lanigera
ENSDARG00000101569	ppargc1b	73	40.984	ENSCSAG00000011792	PPARGC1B	62	40.984	Chlorocebus_sabaeus
ENSDARG00000101569	ppargc1b	54	40.984	ENSCSAG00000016575	PPARGC1A	61	40.984	Chlorocebus_sabaeus
ENSDARG00000101569	ppargc1b	63	38.953	ENSCPBG00000007891	PPARGC1B	52	40.972	Chrysemys_picta_bellii
ENSDARG00000101569	ppargc1b	74	40.984	ENSCANG00000037487	PPARGC1B	64	40.984	Colobus_angolensis_palliatus
ENSDARG00000101569	ppargc1b	54	40.984	ENSCANG00000033426	PPARGC1A	61	40.984	Colobus_angolensis_palliatus
ENSDARG00000101569	ppargc1b	53	40.984	ENSCGRG00001015534	Ppargc1a	60	40.984	Cricetulus_griseus_chok1gshd
ENSDARG00000101569	ppargc1b	77	39.683	ENSCGRG00001017949	Ppargc1b	64	36.986	Cricetulus_griseus_chok1gshd
ENSDARG00000101569	ppargc1b	80	39.683	ENSCGRG00000008387	Ppargc1b	63	41.803	Cricetulus_griseus_crigri
ENSDARG00000101569	ppargc1b	53	40.984	ENSCGRG00000000200	Ppargc1a	60	40.984	Cricetulus_griseus_crigri
ENSDARG00000101569	ppargc1b	51	40.984	ENSDNOG00000041106	PPARGC1A	58	40.984	Dasypus_novemcinctus
ENSDARG00000101569	ppargc1b	70	43.548	ENSDORG00000012605	Ppargc1b	57	42.276	Dipodomys_ordii
ENSDARG00000101569	ppargc1b	54	40.984	ENSDORG00000016276	Ppargc1a	61	40.984	Dipodomys_ordii
ENSDARG00000101569	ppargc1b	54	40.984	ENSEASG00005007984	PPARGC1A	62	40.984	Equus_asinus_asinus
ENSDARG00000101569	ppargc1b	64	37.671	ENSEASG00005002826	PPARGC1B	53	36.806	Equus_asinus_asinus
ENSDARG00000101569	ppargc1b	54	40.984	ENSECAG00000009164	PPARGC1A	61	40.984	Equus_caballus
ENSDARG00000101569	ppargc1b	79	39.041	ENSECAG00000019769	PPARGC1B	54	39.041	Equus_caballus
ENSDARG00000101569	ppargc1b	54	41.803	ENSEEUG00000009219	PPARGC1A	62	41.803	Erinaceus_europaeus
ENSDARG00000101569	ppargc1b	99	59.218	ENSELUG00000014929	ppargc1b	95	96.296	Esox_lucius
ENSDARG00000101569	ppargc1b	54	40.984	ENSFCAG00000000043	PPARGC1A	62	40.984	Felis_catus
ENSDARG00000101569	ppargc1b	84	38.415	ENSFALG00000008858	PPARGC1B	83	37.580	Ficedula_albicollis
ENSDARG00000101569	ppargc1b	54	39.344	ENSFALG00000009211	PPARGC1A	59	39.344	Ficedula_albicollis
ENSDARG00000101569	ppargc1b	54	40.984	ENSFDAG00000005659	PPARGC1A	62	40.984	Fukomys_damarensis
ENSDARG00000101569	ppargc1b	52	39.344	ENSGALG00000042851	PPARGC1A	57	40.602	Gallus_gallus
ENSDARG00000101569	ppargc1b	51	57.143	ENSGAGG00000012870	PPARGC1B	64	56.322	Gopherus_agassizii
ENSDARG00000101569	ppargc1b	54	40.984	ENSGGOG00000009810	PPARGC1A	61	40.984	Gorilla_gorilla
ENSDARG00000101569	ppargc1b	75	43.651	ENSGGOG00000009505	PPARGC1B	59	43.651	Gorilla_gorilla
ENSDARG00000101569	ppargc1b	54	41.803	ENSHGLG00000007022	PPARGC1A	62	41.803	Heterocephalus_glaber_female
ENSDARG00000101569	ppargc1b	54	41.803	ENSHGLG00100000133	PPARGC1A	62	41.803	Heterocephalus_glaber_male
ENSDARG00000101569	ppargc1b	100	96.154	ENSIPUG00000001584	Ppargc1b	93	96.154	Ictalurus_punctatus
ENSDARG00000101569	ppargc1b	81	36.132	ENSSTOG00000024758	PPARGC1B	61	41.803	Ictidomys_tridecemlineatus
ENSDARG00000101569	ppargc1b	52	40.984	ENSSTOG00000012522	PPARGC1A	60	40.984	Ictidomys_tridecemlineatus
ENSDARG00000101569	ppargc1b	88	33.544	ENSJJAG00000018633	Ppargc1b	82	33.987	Jaculus_jaculus
ENSDARG00000101569	ppargc1b	57	40.164	ENSLACG00000014054	PPARGC1A	64	40.164	Latimeria_chalumnae
ENSDARG00000101569	ppargc1b	82	43.571	ENSLACG00000011232	PPARGC1B	60	45.161	Latimeria_chalumnae
ENSDARG00000101569	ppargc1b	100	92.593	ENSLOCG00000012195	ppargc1b	92	92.593	Lepisosteus_oculatus
ENSDARG00000101569	ppargc1b	88	35.443	ENSLAFG00000012339	PPARGC1B	82	35.948	Loxodonta_africana
ENSDARG00000101569	ppargc1b	52	40.984	ENSMFAG00000000534	PPARGC1A	60	40.984	Macaca_fascicularis
ENSDARG00000101569	ppargc1b	77	40.141	ENSMFAG00000042269	PPARGC1B	66	40.984	Macaca_fascicularis
ENSDARG00000101569	ppargc1b	75	40.141	ENSMMUG00000004749	PPARGC1B	66	40.984	Macaca_mulatta
ENSDARG00000101569	ppargc1b	52	40.984	ENSMMUG00000001844	PPARGC1A	61	40.984	Macaca_mulatta
ENSDARG00000101569	ppargc1b	52	40.984	ENSMNEG00000028682	PPARGC1A	60	40.984	Macaca_nemestrina
ENSDARG00000101569	ppargc1b	75	39.437	ENSMNEG00000034121	PPARGC1B	66	40.984	Macaca_nemestrina
ENSDARG00000101569	ppargc1b	74	40.141	ENSMLEG00000040973	PPARGC1B	62	40.984	Mandrillus_leucophaeus
ENSDARG00000101569	ppargc1b	54	40.984	ENSMLEG00000034233	PPARGC1A	61	40.984	Mandrillus_leucophaeus
ENSDARG00000101569	ppargc1b	57	53.125	ENSMGAG00000003134	PPARGC1B	59	55.294	Meleagris_gallopavo
ENSDARG00000101569	ppargc1b	52	39.344	ENSMGAG00000012485	PPARGC1A	56	41.353	Meleagris_gallopavo
ENSDARG00000101569	ppargc1b	53	40.984	ENSMAUG00000011811	Ppargc1a	60	40.984	Mesocricetus_auratus
ENSDARG00000101569	ppargc1b	77	38.889	ENSMAUG00000014191	Ppargc1b	67	37.255	Mesocricetus_auratus
ENSDARG00000101569	ppargc1b	78	38.732	ENSMICG00000002702	PPARGC1B	80	41.803	Microcebus_murinus
ENSDARG00000101569	ppargc1b	53	40.984	ENSMOCG00000008765	Ppargc1a	60	40.984	Microtus_ochrogaster
ENSDARG00000101569	ppargc1b	76	39.241	ENSMOCG00000014885	Ppargc1b	64	39.869	Microtus_ochrogaster
ENSDARG00000101569	ppargc1b	79	40.650	ENSMODG00000009891	PPARGC1B	79	40.650	Monodelphis_domestica
ENSDARG00000101569	ppargc1b	54	40.984	MGP_CAROLIEiJ_G0027213	Ppargc1a	60	40.984	Mus_caroli
ENSDARG00000101569	ppargc1b	79	36.364	MGP_CAROLIEiJ_G0022323	Ppargc1b	67	36.854	Mus_caroli
ENSDARG00000101569	ppargc1b	81	36.076	ENSMUSG00000033871	Ppargc1b	67	36.601	Mus_musculus
ENSDARG00000101569	ppargc1b	54	40.984	ENSMUSG00000029167	Ppargc1a	60	40.984	Mus_musculus
ENSDARG00000101569	ppargc1b	54	40.984	MGP_PahariEiJ_G0016995	Ppargc1a	63	37.584	Mus_pahari
ENSDARG00000101569	ppargc1b	64	37.296	MGP_PahariEiJ_G0019053	Ppargc1b	66	38.168	Mus_pahari
ENSDARG00000101569	ppargc1b	54	40.984	MGP_SPRETEiJ_G0028208	Ppargc1a	60	40.984	Mus_spretus
ENSDARG00000101569	ppargc1b	81	36.076	MGP_SPRETEiJ_G0023235	Ppargc1b	67	36.601	Mus_spretus
ENSDARG00000101569	ppargc1b	52	40.984	ENSMPUG00000016736	PPARGC1A	60	40.984	Mustela_putorius_furo
ENSDARG00000101569	ppargc1b	76	39.041	ENSMPUG00000014245	PPARGC1B	62	39.041	Mustela_putorius_furo
ENSDARG00000101569	ppargc1b	54	40.984	ENSMLUG00000016307	PPARGC1A	62	40.984	Myotis_lucifugus
ENSDARG00000101569	ppargc1b	59	40.000	ENSMLUG00000013169	PPARGC1B	54	40.000	Myotis_lucifugus
ENSDARG00000101569	ppargc1b	77	37.762	ENSNGAG00000016998	Ppargc1b	67	37.762	Nannospalax_galili
ENSDARG00000101569	ppargc1b	54	40.984	ENSNGAG00000015090	Ppargc1a	61	40.984	Nannospalax_galili
ENSDARG00000101569	ppargc1b	54	40.984	ENSNLEG00000016760	PPARGC1A	61	40.984	Nomascus_leucogenys
ENSDARG00000101569	ppargc1b	73	52.893	ENSNLEG00000010193	PPARGC1B	53	52.101	Nomascus_leucogenys
ENSDARG00000101569	ppargc1b	51	40.164	ENSOPRG00000012899	PPARGC1A	58	40.164	Ochotona_princeps
ENSDARG00000101569	ppargc1b	69	41.803	ENSOPRG00000010017	PPARGC1B	60	41.803	Ochotona_princeps
ENSDARG00000101569	ppargc1b	70	39.231	ENSODEG00000004901	PPARGC1B	80	39.231	Octodon_degus
ENSDARG00000101569	ppargc1b	85	34.177	ENSOANG00000009368	PPARGC1B	84	34.641	Ornithorhynchus_anatinus
ENSDARG00000101569	ppargc1b	79	38.356	ENSOCUG00000013833	PPARGC1B	65	41.463	Oryctolagus_cuniculus
ENSDARG00000101569	ppargc1b	51	40.984	ENSOCUG00000014668	PPARGC1A	58	40.984	Oryctolagus_cuniculus
ENSDARG00000101569	ppargc1b	52	40.984	ENSOGAG00000014559	PPARGC1A	60	40.984	Otolemur_garnettii
ENSDARG00000101569	ppargc1b	60	36.111	ENSOARG00000005658	PPARGC1B	69	31.474	Ovis_aries
ENSDARG00000101569	ppargc1b	52	40.984	ENSOARG00000005581	PPARGC1A	54	40.984	Ovis_aries
ENSDARG00000101569	ppargc1b	51	40.984	ENSPPAG00000034694	PPARGC1A	58	40.984	Pan_paniscus
ENSDARG00000101569	ppargc1b	77	43.651	ENSPPAG00000035226	PPARGC1B	61	42.063	Pan_paniscus
ENSDARG00000101569	ppargc1b	54	40.984	ENSPPRG00000001711	PPARGC1A	61	40.984	Panthera_pardus
ENSDARG00000101569	ppargc1b	81	38.308	ENSPPRG00000004608	PPARGC1B	61	39.726	Panthera_pardus
ENSDARG00000101569	ppargc1b	54	40.984	ENSPTIG00000007378	PPARGC1A	61	40.984	Panthera_tigris_altaica
ENSDARG00000101569	ppargc1b	78	36.508	ENSPTIG00000007391	PPARGC1B	59	39.726	Panthera_tigris_altaica
ENSDARG00000101569	ppargc1b	51	40.984	ENSPTRG00000015954	PPARGC1A	58	40.984	Pan_troglodytes
ENSDARG00000101569	ppargc1b	70	57.500	ENSPTRG00000017403	PPARGC1B	62	41.860	Pan_troglodytes
ENSDARG00000101569	ppargc1b	75	40.845	ENSPANG00000009512	PPARGC1B	66	40.984	Papio_anubis
ENSDARG00000101569	ppargc1b	54	40.984	ENSPANG00000005420	PPARGC1A	61	40.984	Papio_anubis
ENSDARG00000101569	ppargc1b	74	32.661	ENSPSIG00000008358	PPARGC1B	69	32.597	Pelodiscus_sinensis
ENSDARG00000101569	ppargc1b	53	40.984	ENSPEMG00000010892	Ppargc1a	64	37.584	Peromyscus_maniculatus_bairdii
ENSDARG00000101569	ppargc1b	78	36.601	ENSPEMG00000018822	Ppargc1b	82	36.601	Peromyscus_maniculatus_bairdii
ENSDARG00000101569	ppargc1b	75	35.849	ENSPCIG00000020102	PPARGC1B	75	41.463	Phascolarctos_cinereus
ENSDARG00000101569	ppargc1b	79	43.651	ENSPPYG00000015938	PPARGC1B	61	42.063	Pongo_abelii
ENSDARG00000101569	ppargc1b	54	40.984	ENSPPYG00000014640	PPARGC1A	61	40.984	Pongo_abelii
ENSDARG00000101569	ppargc1b	50	41.803	ENSPCAG00000016308	PPARGC1A	57	41.803	Procavia_capensis
ENSDARG00000101569	ppargc1b	80	39.735	ENSPCOG00000024059	PPARGC1B	80	40.164	Propithecus_coquereli
ENSDARG00000101569	ppargc1b	52	40.984	ENSPCOG00000022858	PPARGC1A	60	40.984	Propithecus_coquereli
ENSDARG00000101569	ppargc1b	55	40.984	ENSPVAG00000004965	PPARGC1A	62	40.984	Pteropus_vampyrus
ENSDARG00000101569	ppargc1b	100	96.296	ENSPNAG00000023871	ppargc1b	92	96.296	Pygocentrus_nattereri
ENSDARG00000101569	ppargc1b	54	40.984	ENSRNOG00000004473	Ppargc1a	63	37.584	Rattus_norvegicus
ENSDARG00000101569	ppargc1b	54	40.984	ENSRBIG00000032333	PPARGC1A	61	40.984	Rhinopithecus_bieti
ENSDARG00000101569	ppargc1b	54	40.984	ENSRROG00000010419	PPARGC1A	62	40.984	Rhinopithecus_roxellana
ENSDARG00000101569	ppargc1b	59	40.984	ENSSBOG00000006423	PPARGC1A	64	40.984	Saimiri_boliviensis_boliviensis
ENSDARG00000101569	ppargc1b	67	55.833	ENSSBOG00000028738	PPARGC1B	61	42.063	Saimiri_boliviensis_boliviensis
ENSDARG00000101569	ppargc1b	80	40.496	ENSSHAG00000016400	PPARGC1B	78	40.496	Sarcophilus_harrisii
ENSDARG00000101569	ppargc1b	88	63.534	ENSSFOG00015003048	ppargc1b	54	71.681	Scleropages_formosus
ENSDARG00000101569	ppargc1b	54	40.984	ENSSARG00000000575	PPARGC1A	61	40.984	Sorex_araneus
ENSDARG00000101569	ppargc1b	82	42.276	ENSSPUG00000019271	PPARGC1B	79	42.276	Sphenodon_punctatus
ENSDARG00000101569	ppargc1b	52	40.984	ENSSSCG00000029275	PPARGC1A	60	40.984	Sus_scrofa
ENSDARG00000101569	ppargc1b	76	37.671	ENSSSCG00000014437	PPARGC1B	65	38.621	Sus_scrofa
ENSDARG00000101569	ppargc1b	52	40.164	ENSTGUG00000009487	PPARGC1A	56	40.164	Taeniopygia_guttata
ENSDARG00000101569	ppargc1b	84	40.625	ENSTGUG00000000232	PPARGC1B	83	39.869	Taeniopygia_guttata
ENSDARG00000101569	ppargc1b	54	40.984	ENSTTRG00000005327	PPARGC1A	62	40.984	Tursiops_truncatus
ENSDARG00000101569	ppargc1b	74	39.860	ENSTTRG00000008430	PPARGC1B	65	39.860	Tursiops_truncatus
ENSDARG00000101569	ppargc1b	54	40.984	ENSUMAG00000003557	PPARGC1A	63	40.984	Ursus_maritimus
ENSDARG00000101569	ppargc1b	74	38.776	ENSUMAG00000005361	PPARGC1B	60	39.041	Ursus_maritimus
ENSDARG00000101569	ppargc1b	54	40.984	ENSVVUG00000013365	PPARGC1A	62	40.984	Vulpes_vulpes
ENSDARG00000101569	ppargc1b	76	39.726	ENSVVUG00000014358	PPARGC1B	62	39.726	Vulpes_vulpes
ENSDARG00000101569	ppargc1b	80	39.617	ENSXETG00000012711	ppargc1b	82	41.322	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003712	transcription coregulator activity	21873635.	IBA	Function
GO:0003712	transcription coregulator activity	-	IEA	Function
GO:0005102	signaling receptor binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0007005	mitochondrion organization	-	IEA	Process
GO:0008134	transcription factor binding	21873635.	IBA	Function
GO:0008134	transcription factor binding	-	IEA	Function
GO:0030374	nuclear receptor transcription coactivator activity	21873635.	IBA	Function
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0050873	brown fat cell differentiation	-	IEA	Process
GO:0051091	positive regulation of DNA-binding transcription factor activity	21873635.	IBA	Process