EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000101680 (Gene tree)
Gene ID: 436746
Gene Symbol: arl1
Alias: zgc:92883
Full Name: ADP-ribosylation factor-like 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 6381 bases
Position: chr4:5906958-5913338
Accession: ZDB-GENE-040718-175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000132630	MMR_HSR1	PF01926.23	2.5e-05	1	1
ENSDARP00000150582	MMR_HSR1	PF01926.23	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000169439	-	513	-	ENSDARP00000132630	171 (aa)	-	A0A0R4IGI5
ENSDART00000183590	-	4285	-	ENSDARP00000150582	181 (aa)	-	Q6DGK1

Gene Model

Click here to download ENSDARG00000101680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000101680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000101680	arl1	100	58.480	ENSDARG00000014763	arf2a	99	63.248
ENSDARG00000101680	arl1	96	40.223	ENSDARG00000032708	arl4cb	93	40.223
ENSDARG00000101680	arl1	96	32.184	ENSDARG00000006915	arl8ba	94	32.184
ENSDARG00000101680	arl1	92	46.497	ENSDARG00000056794	zgc:110197	91	43.976
ENSDARG00000101680	arl1	80	30.137	ENSDARG00000030949	srprb	55	30.137
ENSDARG00000101680	arl1	95	31.902	ENSDARG00000070318	arl8bb	92	32.558
ENSDARG00000101680	arl1	96	40.936	ENSDARG00000099918	arl4aa	91	39.560
ENSDARG00000101680	arl1	100	56.725	ENSDARG00000070539	arf3a	100	55.801
ENSDARG00000101680	arl1	92	47.134	ENSDARG00000071409	arl3	91	45.181
ENSDARG00000101680	arl1	100	59.649	ENSDARG00000016393	arf2b	100	61.806
ENSDARG00000101680	arl1	100	59.649	ENSDARG00000056582	arf2b	100	58.564
ENSDARG00000101680	arl1	100	57.895	ENSDARG00000009484	arf1	100	56.906
ENSDARG00000101680	arl1	99	34.637	ENSDARG00000057857	arfrp1	93	34.225
ENSDARG00000101680	arl1	92	35.465	ENSDARG00000045074	arl4d	86	35.465
ENSDARG00000101680	arl1	88	34.839	ENSDARG00000012763	arl13b	66	32.184
ENSDARG00000101680	arl1	100	49.123	ENSDARG00000094709	arl8	96	49.133
ENSDARG00000101680	arl1	98	60.119	ENSDARG00000113899	zgc:77650	100	58.889
ENSDARG00000101680	arl1	96	40.782	ENSDARG00000057606	arl4ca	93	40.782
ENSDARG00000101680	arl1	99	57.778	ENSDARG00000045989	arf4a	100	57.778
ENSDARG00000101680	arl1	93	41.765	ENSDARG00000036637	arl11	94	41.765
ENSDARG00000101680	arl1	92	44.172	ENSDARG00000063223	arl14	87	41.714
ENSDARG00000101680	arl1	100	53.488	ENSDARG00000074210	ARF5	89	53.039
ENSDARG00000101680	arl1	97	39.306	ENSDARG00000033182	arl4ab	87	39.429
ENSDARG00000101680	arl1	86	44.218	ENSDARG00000015404	arl3l2	88	44.848
ENSDARG00000101680	arl1	72	31.250	ENSDARG00000015807	rab22a	65	31.250
ENSDARG00000101680	arl1	100	30.811	ENSDARG00000078686	arl8a	99	30.811
ENSDARG00000101680	arl1	92	45.860	ENSDARG00000069496	arl2	90	44.848
ENSDARG00000101680	arl1	99	46.512	ENSDARG00000111106	arl3l1	96	44.199
ENSDARG00000101680	arl1	100	57.310	ENSDARG00000036998	arf3b	100	56.354
ENSDARG00000101680	arl1	100	47.953	ENSDARG00000035719	arl5c	96	47.977
ENSDARG00000101680	arl1	98	59.524	ENSDARG00000070472	arf5	100	58.333
ENSDARG00000101680	arl1	99	38.068	ENSDARG00000032056	arl6	98	37.158
ENSDARG00000101680	arl1	100	47.953	ENSDARG00000018627	arl5a	100	47.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000101680	arl1	92	95.570	ENSG00000120805	ARL1	100	95.122	Homo_sapiens
ENSDARG00000101680	arl1	100	98.246	ENSAPOG00000002469	arl1	100	97.790	Acanthochromis_polyacanthus
ENSDARG00000101680	arl1	92	96.203	ENSAMEG00000016452	ARL1	99	94.444	Ailuropoda_melanoleuca
ENSDARG00000101680	arl1	99	97.633	ENSACIG00000007953	arl1	100	96.648	Amphilophus_citrinellus
ENSDARG00000101680	arl1	100	98.246	ENSAOCG00000013008	arl1	100	97.790	Amphiprion_ocellaris
ENSDARG00000101680	arl1	100	98.246	ENSAPEG00000013187	arl1	100	97.790	Amphiprion_percula
ENSDARG00000101680	arl1	99	98.824	ENSATEG00000005559	arl1	96	98.324	Anabas_testudineus
ENSDARG00000101680	arl1	100	95.906	ENSAPLG00000016092	ARL1	100	95.028	Anas_platyrhynchos
ENSDARG00000101680	arl1	100	96.491	ENSACAG00000011602	ARL1	100	96.133	Anolis_carolinensis
ENSDARG00000101680	arl1	92	96.203	ENSANAG00000023491	ARL1	100	95.028	Aotus_nancymaae
ENSDARG00000101680	arl1	100	99.415	ENSACLG00000008188	arl1	100	98.895	Astatotilapia_calliptera
ENSDARG00000101680	arl1	100	99.448	ENSAMXG00000021056	arl1	100	99.448	Astyanax_mexicanus
ENSDARG00000101680	arl1	92	96.203	ENSBTAG00000011883	ARL1	100	95.028	Bos_taurus
ENSDARG00000101680	arl1	99	76.471	WBGene00000187	arl-1	100	74.033	Caenorhabditis_elegans
ENSDARG00000101680	arl1	92	96.203	ENSCJAG00000001966	ARL1	100	95.028	Callithrix_jacchus
ENSDARG00000101680	arl1	92	96.203	ENSCAFG00000006992	ARL1	100	95.028	Canis_familiaris
ENSDARG00000101680	arl1	92	96.203	ENSCAFG00020024333	ARL1	100	95.028	Canis_lupus_dingo
ENSDARG00000101680	arl1	94	96.273	ENSCHIG00000024524	ARL1	100	95.882	Capra_hircus
ENSDARG00000101680	arl1	93	96.226	ENSTSYG00000013257	-	100	94.972	Carlito_syrichta
ENSDARG00000101680	arl1	81	95.652	ENSCAPG00000001010	ARL1	100	95.652	Cavia_aperea
ENSDARG00000101680	arl1	92	96.203	ENSCPOG00000026014	ARL1	100	95.028	Cavia_porcellus
ENSDARG00000101680	arl1	92	96.203	ENSCCAG00000025938	ARL1	100	95.028	Cebus_capucinus
ENSDARG00000101680	arl1	92	96.203	ENSCLAG00000008180	ARL1	100	94.475	Chinchilla_lanigera
ENSDARG00000101680	arl1	92	95.570	ENSCSAG00000003368	ARL1	100	94.475	Chlorocebus_sabaeus
ENSDARG00000101680	arl1	100	95.322	ENSCPBG00000004906	ARL1	100	94.475	Chrysemys_picta_bellii
ENSDARG00000101680	arl1	93	44.720	ENSCING00000004577	-	97	44.118	Ciona_intestinalis
ENSDARG00000101680	arl1	100	81.871	ENSCING00000019794	-	100	80.000	Ciona_intestinalis
ENSDARG00000101680	arl1	100	81.871	ENSCSAVG00000007620	-	98	79.444	Ciona_savignyi
ENSDARG00000101680	arl1	92	94.937	ENSCANG00000033548	ARL1	100	93.923	Colobus_angolensis_palliatus
ENSDARG00000101680	arl1	92	96.835	ENSCGRG00001010446	Arl1	100	95.580	Cricetulus_griseus_chok1gshd
ENSDARG00000101680	arl1	92	96.203	ENSCGRG00000009856	Arl1	90	94.475	Cricetulus_griseus_crigri
ENSDARG00000101680	arl1	100	98.830	ENSCVAG00000001731	arl1	100	97.790	Cyprinodon_variegatus
ENSDARG00000101680	arl1	92	96.203	ENSDORG00000014770	Arl1	95	94.475	Dipodomys_ordii
ENSDARG00000101680	arl1	100	79.006	FBgn0000115	Arl1	100	79.006	Drosophila_melanogaster
ENSDARG00000101680	arl1	98	94.048	ENSETEG00000020310	ARL1	100	92.135	Echinops_telfairi
ENSDARG00000101680	arl1	92	96.203	ENSEASG00005020057	ARL1	100	95.028	Equus_asinus_asinus
ENSDARG00000101680	arl1	99	93.023	ENSECAG00000000372	ARL1	100	95.028	Equus_caballus
ENSDARG00000101680	arl1	100	98.246	ENSELUG00000018440	arl1	100	97.790	Esox_lucius
ENSDARG00000101680	arl1	100	98.246	ENSELUG00000001287	-	100	97.790	Esox_lucius
ENSDARG00000101680	arl1	92	96.203	ENSFCAG00000030871	ARL1	100	95.028	Felis_catus
ENSDARG00000101680	arl1	100	95.906	ENSFALG00000011156	ARL1	100	95.580	Ficedula_albicollis
ENSDARG00000101680	arl1	92	96.203	ENSFDAG00000016393	ARL1	100	94.475	Fukomys_damarensis
ENSDARG00000101680	arl1	99	99.412	ENSFHEG00000004171	arl1	95	98.324	Fundulus_heteroclitus
ENSDARG00000101680	arl1	100	98.895	ENSGMOG00000006859	arl1	100	98.895	Gadus_morhua
ENSDARG00000101680	arl1	100	95.906	ENSGALG00000011651	ARL1	100	95.580	Gallus_gallus
ENSDARG00000101680	arl1	96	99.394	ENSGAFG00000006973	arl1	99	99.394	Gambusia_affinis
ENSDARG00000101680	arl1	100	96.491	ENSGACG00000019098	arl1	100	96.133	Gasterosteus_aculeatus
ENSDARG00000101680	arl1	92	95.570	ENSGGOG00000010788	ARL1	100	94.475	Gorilla_gorilla
ENSDARG00000101680	arl1	100	99.415	ENSHBUG00000010636	arl1	100	98.895	Haplochromis_burtoni
ENSDARG00000101680	arl1	92	96.835	ENSHGLG00000004909	ARL1	100	95.580	Heterocephalus_glaber_female
ENSDARG00000101680	arl1	92	96.835	ENSHGLG00100001832	ARL1	100	95.028	Heterocephalus_glaber_male
ENSDARG00000101680	arl1	100	98.830	ENSHCOG00000005566	arl1	100	98.343	Hippocampus_comes
ENSDARG00000101680	arl1	99	98.883	ENSIPUG00000013834	arl1	96	98.883	Ictalurus_punctatus
ENSDARG00000101680	arl1	92	96.203	ENSSTOG00000016022	ARL1	100	95.028	Ictidomys_tridecemlineatus
ENSDARG00000101680	arl1	92	86.826	ENSJJAG00000000452	-	100	86.188	Jaculus_jaculus
ENSDARG00000101680	arl1	91	100.000	ENSKMAG00000005931	arl1	84	100.000	Kryptolebias_marmoratus
ENSDARG00000101680	arl1	96	96.970	ENSLBEG00000000991	arl1	99	96.552	Labrus_bergylta
ENSDARG00000101680	arl1	92	96.203	ENSLAFG00000026143	ARL1	95	95.028	Loxodonta_africana
ENSDARG00000101680	arl1	92	95.570	ENSMFAG00000035725	ARL1	100	94.475	Macaca_fascicularis
ENSDARG00000101680	arl1	92	95.570	ENSMMUG00000031610	ARL1	100	93.923	Macaca_mulatta
ENSDARG00000101680	arl1	92	95.570	ENSMNEG00000007067	ARL1	100	94.475	Macaca_nemestrina
ENSDARG00000101680	arl1	91	95.484	ENSMLEG00000036143	ARL1	100	95.122	Mandrillus_leucophaeus
ENSDARG00000101680	arl1	99	97.633	ENSMAMG00000001968	arl1	100	96.648	Mastacembelus_armatus
ENSDARG00000101680	arl1	100	99.415	ENSMZEG00005018136	arl1	100	98.895	Maylandia_zebra
ENSDARG00000101680	arl1	100	95.906	ENSMGAG00000011748	ARL1	100	95.028	Meleagris_gallopavo
ENSDARG00000101680	arl1	92	96.835	ENSMAUG00000021923	Arl1	100	95.580	Mesocricetus_auratus
ENSDARG00000101680	arl1	92	96.203	ENSMICG00000015801	ARL1	100	95.028	Microcebus_murinus
ENSDARG00000101680	arl1	92	96.835	ENSMOCG00000005852	Arl1	100	95.580	Microtus_ochrogaster
ENSDARG00000101680	arl1	100	95.322	ENSMMOG00000003353	arl1	68	95.322	Mola_mola
ENSDARG00000101680	arl1	100	94.737	ENSMODG00000003056	ARL1	100	94.475	Monodelphis_domestica
ENSDARG00000101680	arl1	99	97.041	ENSMALG00000003003	arl1	99	97.576	Monopterus_albus
ENSDARG00000101680	arl1	92	96.835	MGP_CAROLIEiJ_G0015712	Arl1	100	95.580	Mus_caroli
ENSDARG00000101680	arl1	92	96.835	ENSMUSG00000060904	Arl1	100	96.377	Mus_musculus
ENSDARG00000101680	arl1	92	96.835	MGP_PahariEiJ_G0031373	Arl1	100	95.580	Mus_pahari
ENSDARG00000101680	arl1	92	96.835	MGP_SPRETEiJ_G0016530	Arl1	100	95.580	Mus_spretus
ENSDARG00000101680	arl1	92	96.203	ENSMPUG00000011822	ARL1	99	94.475	Mustela_putorius_furo
ENSDARG00000101680	arl1	92	96.203	ENSMLUG00000002351	-	100	94.767	Myotis_lucifugus
ENSDARG00000101680	arl1	92	91.139	ENSMLUG00000025321	-	100	90.055	Myotis_lucifugus
ENSDARG00000101680	arl1	81	96.377	ENSNGAG00000007879	-	100	96.377	Nannospalax_galili
ENSDARG00000101680	arl1	100	99.415	ENSNBRG00000019783	arl1	100	98.895	Neolamprologus_brichardi
ENSDARG00000101680	arl1	91	95.484	ENSNLEG00000006223	ARL1	100	95.122	Nomascus_leucogenys
ENSDARG00000101680	arl1	100	94.737	ENSMEUG00000015525	ARL1	95	94.475	Notamacropus_eugenii
ENSDARG00000101680	arl1	92	96.835	ENSODEG00000019783	-	100	95.580	Octodon_degus
ENSDARG00000101680	arl1	92	94.937	ENSODEG00000019880	-	100	93.923	Octodon_degus
ENSDARG00000101680	arl1	92	96.835	ENSODEG00000010531	-	100	95.556	Octodon_degus
ENSDARG00000101680	arl1	100	99.415	ENSONIG00000009921	arl1	100	98.895	Oreochromis_niloticus
ENSDARG00000101680	arl1	92	96.203	ENSOCUG00000002217	ARL1	96	95.028	Oryctolagus_cuniculus
ENSDARG00000101680	arl1	97	98.795	ENSORLG00000008909	arl1	98	98.795	Oryzias_latipes
ENSDARG00000101680	arl1	100	99.415	ENSORLG00020005754	arl1	100	98.895	Oryzias_latipes_hni
ENSDARG00000101680	arl1	100	99.415	ENSORLG00015002736	arl1	100	98.895	Oryzias_latipes_hsok
ENSDARG00000101680	arl1	96	99.394	ENSOMEG00000023497	arl1	93	98.851	Oryzias_melastigma
ENSDARG00000101680	arl1	92	95.570	ENSOGAG00000015144	ARL1	100	94.475	Otolemur_garnettii
ENSDARG00000101680	arl1	92	96.203	ENSOARG00000015007	ARL1	100	95.028	Ovis_aries
ENSDARG00000101680	arl1	92	95.570	ENSPPAG00000034860	ARL1	100	94.475	Pan_paniscus
ENSDARG00000101680	arl1	92	96.203	ENSPPRG00000023908	ARL1	100	95.028	Panthera_pardus
ENSDARG00000101680	arl1	93	96.226	ENSPTIG00000002154	-	100	94.972	Panthera_tigris_altaica
ENSDARG00000101680	arl1	92	95.570	ENSPTRG00000005350	ARL1	100	94.475	Pan_troglodytes
ENSDARG00000101680	arl1	96	94.545	ENSPANG00000018816	ARL1	97	94.413	Papio_anubis
ENSDARG00000101680	arl1	100	98.895	ENSPKIG00000007118	arl1	100	99.390	Paramormyrops_kingsleyae
ENSDARG00000101680	arl1	100	95.906	ENSPSIG00000006539	ARL1	100	95.028	Pelodiscus_sinensis
ENSDARG00000101680	arl1	96	95.758	ENSPMGG00000004070	arl1	98	95.758	Periophthalmus_magnuspinnatus
ENSDARG00000101680	arl1	92	96.835	ENSPEMG00000008781	Arl1	100	95.580	Peromyscus_maniculatus_bairdii
ENSDARG00000101680	arl1	100	93.567	ENSPMAG00000002070	arl1	100	92.818	Petromyzon_marinus
ENSDARG00000101680	arl1	100	94.737	ENSPCIG00000009683	-	97	94.444	Phascolarctos_cinereus
ENSDARG00000101680	arl1	100	99.415	ENSPFOG00000003241	arl1	100	98.343	Poecilia_formosa
ENSDARG00000101680	arl1	100	99.415	ENSPLAG00000012898	arl1	100	98.343	Poecilia_latipinna
ENSDARG00000101680	arl1	100	99.415	ENSPMEG00000005938	arl1	96	98.333	Poecilia_mexicana
ENSDARG00000101680	arl1	100	99.415	ENSPREG00000013361	arl1	96	98.333	Poecilia_reticulata
ENSDARG00000101680	arl1	92	95.570	ENSPPYG00000004872	ARL1	100	94.475	Pongo_abelii
ENSDARG00000101680	arl1	100	91.813	ENSPCOG00000015554	-	100	91.713	Propithecus_coquereli
ENSDARG00000101680	arl1	92	96.203	ENSPVAG00000008119	ARL1	95	95.028	Pteropus_vampyrus
ENSDARG00000101680	arl1	100	99.415	ENSPNYG00000011671	arl1	100	98.895	Pundamilia_nyererei
ENSDARG00000101680	arl1	96	99.394	ENSPNAG00000028795	arl1	99	99.394	Pygocentrus_nattereri
ENSDARG00000101680	arl1	92	96.835	ENSRNOG00000005763	Arl1	100	95.580	Rattus_norvegicus
ENSDARG00000101680	arl1	92	95.570	ENSRBIG00000042560	ARL1	100	94.475	Rhinopithecus_bieti
ENSDARG00000101680	arl1	92	95.570	ENSRROG00000037996	ARL1	100	94.475	Rhinopithecus_roxellana
ENSDARG00000101680	arl1	92	96.203	ENSSBOG00000024352	-	100	95.028	Saimiri_boliviensis_boliviensis
ENSDARG00000101680	arl1	100	94.737	ENSSHAG00000004634	ARL1	100	93.923	Sarcophilus_harrisii
ENSDARG00000101680	arl1	100	98.895	ENSSFOG00015001665	arl1	100	98.895	Scleropages_formosus
ENSDARG00000101680	arl1	100	97.076	ENSSMAG00000016416	arl1	100	96.685	Scophthalmus_maximus
ENSDARG00000101680	arl1	99	96.450	ENSSDUG00000013898	arl1	95	96.450	Seriola_dumerili
ENSDARG00000101680	arl1	100	98.246	ENSSLDG00000012946	arl1	100	97.790	Seriola_lalandi_dorsalis
ENSDARG00000101680	arl1	93	96.226	ENSSARG00000013944	ARL1	100	93.855	Sorex_araneus
ENSDARG00000101680	arl1	100	96.491	ENSSPUG00000004578	ARL1	100	96.133	Sphenodon_punctatus
ENSDARG00000101680	arl1	100	97.661	ENSSPAG00000014633	arl1	100	97.238	Stegastes_partitus
ENSDARG00000101680	arl1	92	96.203	ENSSSCG00000000870	ARL1	100	95.028	Sus_scrofa
ENSDARG00000101680	arl1	99	95.882	ENSTGUG00000009085	-	100	95.531	Taeniopygia_guttata
ENSDARG00000101680	arl1	100	96.491	ENSTRUG00000006254	arl1	100	96.133	Takifugu_rubripes
ENSDARG00000101680	arl1	100	96.491	ENSTNIG00000006920	arl1	99	95.580	Tetraodon_nigroviridis
ENSDARG00000101680	arl1	92	96.203	ENSTBEG00000015546	ARL1	100	93.407	Tupaia_belangeri
ENSDARG00000101680	arl1	92	96.203	ENSTTRG00000017202	ARL1	95	95.028	Tursiops_truncatus
ENSDARG00000101680	arl1	92	96.203	ENSUMAG00000019547	ARL1	100	95.028	Ursus_maritimus
ENSDARG00000101680	arl1	92	96.203	ENSVPAG00000011621	ARL1	95	95.028	Vicugna_pacos
ENSDARG00000101680	arl1	92	96.203	ENSVVUG00000018044	ARL1	100	95.028	Vulpes_vulpes
ENSDARG00000101680	arl1	100	96.685	ENSXETG00000002540	arl1	100	96.685	Xenopus_tropicalis
ENSDARG00000101680	arl1	99	98.225	ENSXMAG00000028338	arl1	100	96.648	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003924	GTPase activity	-	ISS	Function
GO:0005525	GTP binding	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005525	GTP binding	-	ISS	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005794	Golgi apparatus	21873635.	IBA	Component
GO:0005794	Golgi apparatus	-	ISS	Component
GO:0005802	trans-Golgi network	-	ISS	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0007030	Golgi organization	-	ISS	Process
GO:0008047	enzyme activator activity	-	ISS	Function
GO:0009404	toxin metabolic process	-	ISS	Process
GO:0016192	vesicle-mediated transport	21873635.	IBA	Process
GO:0031584	activation of phospholipase D activity	-	ISS	Process
GO:0034067	protein localization to Golgi apparatus	-	ISS	Process
GO:0042147	retrograde transport, endosome to Golgi	-	ISS	Process