EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000101808 (Gene tree)
Gene ID: 777712
Gene Symbol: si:ch211-271b14.1
Alias: si:ch211-271b14.1|zgc:152816
Full Name: si:ch211-271b14.1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 24725
Position: chr5: 67835595-67860319
Accession: ZDB-GENE-141212-386
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	preZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116
28381614	Dynamic RNA-protein interactions underlie the zebrafish maternal-to-zygotic transition	ZGA & embryo	2017 Apr 5	Despic V	DOI: 10.1101/gr.215954.116

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000160469	-	1005	-	ENSDARP00000130145	229 (aa)	-	A0A0N4STP0
ENSDART00000159386	-	3187	-	ENSDARP00000136346	914 (aa)	-	A0A0N4SU43

Gene Model

Click here to download ENSDARG00000101808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000101808's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000101808	si:ch211-271b14.1	86	41.667	ENSDARG00000000394	matr3l1.1	85	30.664	Danio_rerio