EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000101877 (Gene tree)
Gene ID: 436655
Gene Symbol: rbm34
Alias: zgc:92062
Full Name: RNA binding motif protein 34
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 20822 bases
Position: chr11:44617021-44637842
Accession: ZDB-GENE-040718-77
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000149035	RRM_1	PF00076.22	1.5e-27	1	2
ENSDARP00000149035	RRM_1	PF00076.22	1.5e-27	2	2
ENSDARP00000133124	RRM_1	PF00076.22	1.5e-27	1	2
ENSDARP00000133124	RRM_1	PF00076.22	1.5e-27	2	2
ENSDARP00000136398	RRM_1	PF00076.22	1.5e-27	1	2
ENSDARP00000136398	RRM_1	PF00076.22	1.5e-27	2	2
ENSDARP00000135152	RRM_1	PF00076.22	2.2e-21	1	2
ENSDARP00000135152	RRM_1	PF00076.22	2.2e-21	2	2
ENSDARP00000137265	RRM_1	PF00076.22	4.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000159068	-	911	-	ENSDARP00000137265	256 (aa)	-	A0A0R4IT18
ENSDART00000166323	-	1033	-	ENSDARP00000135152	298 (aa)	-	A0A0R4ILV0
ENSDART00000159618	-	4669	-	ENSDARP00000133124	411 (aa)	-	Q6DHU2
ENSDART00000187753	-	1421	XM_005155924	ENSDARP00000149035	410 (aa)	XP_005155981	A0A2R8Q7F9
ENSDART00000158887	-	1513	-	ENSDARP00000136398	411 (aa)	-	Q6DHU2

Gene Model

Click here to download ENSDARG00000101877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000101877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000101877	rbm34	95	47.712	ENSG00000188739	RBM34	70	47.195	Homo_sapiens
ENSDARG00000101877	rbm34	100	53.618	ENSAPOG00000004027	rbm34	96	53.000	Acanthochromis_polyacanthus
ENSDARG00000101877	rbm34	97	48.136	ENSACIG00000014842	rbm34	85	47.859	Amphilophus_citrinellus
ENSDARG00000101877	rbm34	95	54.325	ENSAOCG00000006146	rbm34	91	53.453	Amphiprion_ocellaris
ENSDARG00000101877	rbm34	95	53.979	ENSAPEG00000022105	rbm34	91	51.378	Amphiprion_percula
ENSDARG00000101877	rbm34	100	50.566	ENSATEG00000016567	rbm34	96	50.605	Anabas_testudineus
ENSDARG00000101877	rbm34	76	52.479	ENSAPLG00000004344	RBM34	79	56.855	Anas_platyrhynchos
ENSDARG00000101877	rbm34	99	44.828	ENSACAG00000001253	RBM34	93	42.787	Anolis_carolinensis
ENSDARG00000101877	rbm34	95	43.302	ENSANAG00000029971	RBM34	56	54.400	Aotus_nancymaae
ENSDARG00000101877	rbm34	98	53.000	ENSACLG00000026337	rbm34	93	52.632	Astatotilapia_calliptera
ENSDARG00000101877	rbm34	98	53.000	ENSACLG00000018471	rbm34	81	52.632	Astatotilapia_calliptera
ENSDARG00000101877	rbm34	98	58.609	ENSAMXG00000021328	rbm34	97	54.907	Astyanax_mexicanus
ENSDARG00000101877	rbm34	95	46.078	ENSCJAG00000018125	RBM34	58	54.800	Callithrix_jacchus
ENSDARG00000101877	rbm34	97	43.974	ENSCAFG00000011507	RBM34	52	56.425	Canis_familiaris
ENSDARG00000101877	rbm34	95	46.732	ENSTSYG00000009942	RBM34	59	53.937	Carlito_syrichta
ENSDARG00000101877	rbm34	74	44.156	ENSCAPG00000015346	RBM34	69	45.455	Cavia_aperea
ENSDARG00000101877	rbm34	96	46.302	ENSCPOG00000015213	RBM34	77	47.647	Cavia_porcellus
ENSDARG00000101877	rbm34	97	45.192	ENSCCAG00000025584	RBM34	58	54.762	Cebus_capucinus
ENSDARG00000101877	rbm34	97	45.513	ENSCATG00000031771	RBM34	58	55.200	Cercocebus_atys
ENSDARG00000101877	rbm34	95	46.488	ENSCLAG00000003464	RBM34	63	54.724	Chinchilla_lanigera
ENSDARG00000101877	rbm34	97	45.513	ENSCSAG00000010079	RBM34	58	55.200	Chlorocebus_sabaeus
ENSDARG00000101877	rbm34	99	44.479	ENSCPBG00000005460	RBM34	85	43.204	Chrysemys_picta_bellii
ENSDARG00000101877	rbm34	96	45.981	ENSCANG00000009561	RBM34	58	54.941	Colobus_angolensis_palliatus
ENSDARG00000101877	rbm34	92	41.538	ENSCGRG00001018721	Rbm34	60	48.571	Cricetulus_griseus_chok1gshd
ENSDARG00000101877	rbm34	97	37.061	ENSCGRG00000014051	Rbm34	56	43.580	Cricetulus_griseus_crigri
ENSDARG00000101877	rbm34	95	51.678	ENSCSEG00000000993	rbm34	90	52.099	Cynoglossus_semilaevis
ENSDARG00000101877	rbm34	95	53.265	ENSCVAG00000018699	rbm34	95	49.751	Cyprinodon_variegatus
ENSDARG00000101877	rbm34	97	46.562	ENSDNOG00000044740	RBM34	59	54.118	Dasypus_novemcinctus
ENSDARG00000101877	rbm34	71	51.869	ENSDORG00000006420	Rbm34	85	51.087	Dipodomys_ordii
ENSDARG00000101877	rbm34	68	47.343	ENSEBUG00000012070	rbm34	73	48.178	Eptatretus_burgeri
ENSDARG00000101877	rbm34	97	34.951	ENSEEUG00000012760	RBM34	56	43.697	Erinaceus_europaeus
ENSDARG00000101877	rbm34	97	58.249	ENSELUG00000015682	rbm34	96	52.632	Esox_lucius
ENSDARG00000101877	rbm34	97	44.551	ENSFCAG00000001852	RBM34	78	45.906	Felis_catus
ENSDARG00000101877	rbm34	51	59.603	ENSFALG00000013552	RBM34	96	60.000	Ficedula_albicollis
ENSDARG00000101877	rbm34	98	50.167	ENSFHEG00000010140	rbm34	99	50.498	Fundulus_heteroclitus
ENSDARG00000101877	rbm34	79	48.718	ENSGMOG00000011683	rbm34	83	54.286	Gadus_morhua
ENSDARG00000101877	rbm34	83	43.946	ENSGALG00000029915	RBM34	77	44.395	Gallus_gallus
ENSDARG00000101877	rbm34	100	51.935	ENSGAFG00000017798	rbm34	95	49.265	Gambusia_affinis
ENSDARG00000101877	rbm34	100	50.479	ENSGACG00000001040	-	95	47.381	Gasterosteus_aculeatus
ENSDARG00000101877	rbm34	99	42.991	ENSGAGG00000020598	RBM34	92	42.373	Gopherus_agassizii
ENSDARG00000101877	rbm34	95	48.039	ENSGGOG00000007924	RBM34	77	49.398	Gorilla_gorilla
ENSDARG00000101877	rbm34	98	53.000	ENSHBUG00000015508	rbm34	93	52.632	Haplochromis_burtoni
ENSDARG00000101877	rbm34	98	43.408	ENSHGLG00000016495	RBM34	59	52.734	Heterocephalus_glaber_female
ENSDARG00000101877	rbm34	98	43.408	ENSHGLG00100014678	RBM34	59	52.734	Heterocephalus_glaber_male
ENSDARG00000101877	rbm34	70	46.262	ENSHCOG00000010393	rbm34	60	49.606	Hippocampus_comes
ENSDARG00000101877	rbm34	98	56.997	ENSIPUG00000021952	rbm34	93	54.950	Ictalurus_punctatus
ENSDARG00000101877	rbm34	99	43.653	ENSSTOG00000002792	RBM34	73	44.620	Ictidomys_tridecemlineatus
ENSDARG00000101877	rbm34	68	53.052	ENSJJAG00000021295	Rbm34	79	54.545	Jaculus_jaculus
ENSDARG00000101877	rbm34	100	51.592	ENSKMAG00000007790	rbm34	96	49.637	Kryptolebias_marmoratus
ENSDARG00000101877	rbm34	98	49.367	ENSLBEG00000022530	-	94	52.120	Labrus_bergylta
ENSDARG00000101877	rbm34	71	53.311	ENSLBEG00000028305	rbm34	81	53.268	Labrus_bergylta
ENSDARG00000101877	rbm34	95	50.000	ENSLACG00000013628	RBM34	91	46.005	Latimeria_chalumnae
ENSDARG00000101877	rbm34	95	54.915	ENSLOCG00000015902	rbm34	90	50.627	Lepisosteus_oculatus
ENSDARG00000101877	rbm34	97	45.000	ENSLAFG00000014289	RBM34	59	53.640	Loxodonta_africana
ENSDARG00000101877	rbm34	97	45.833	ENSMFAG00000038522	RBM34	58	55.600	Macaca_fascicularis
ENSDARG00000101877	rbm34	97	45.833	ENSMMUG00000039424	RBM34	61	55.600	Macaca_mulatta
ENSDARG00000101877	rbm34	97	45.833	ENSMNEG00000040149	RBM34	58	55.600	Macaca_nemestrina
ENSDARG00000101877	rbm34	100	49.071	ENSMAMG00000018828	rbm34	96	50.363	Mastacembelus_armatus
ENSDARG00000101877	rbm34	58	56.855	ENSMZEG00005010091	-	87	56.574	Maylandia_zebra
ENSDARG00000101877	rbm34	98	53.667	ENSMZEG00005021586	rbm34	93	52.261	Maylandia_zebra
ENSDARG00000101877	rbm34	95	46.918	ENSMGAG00000011921	RBM34	76	48.220	Meleagris_gallopavo
ENSDARG00000101877	rbm34	97	44.108	ENSMICG00000038704	-	78	43.505	Microcebus_murinus
ENSDARG00000101877	rbm34	99	44.099	ENSMOCG00000013550	Rbm34	82	45.559	Microtus_ochrogaster
ENSDARG00000101877	rbm34	100	51.140	ENSMMOG00000018675	rbm34	95	46.782	Mola_mola
ENSDARG00000101877	rbm34	98	40.426	ENSMODG00000008436	RBM34	92	38.785	Monodelphis_domestica
ENSDARG00000101877	rbm34	100	52.145	ENSMALG00000007816	rbm34	95	50.508	Monopterus_albus
ENSDARG00000101877	rbm34	95	43.506	MGP_CAROLIEiJ_G0031732	Rbm34	59	51.953	Mus_caroli
ENSDARG00000101877	rbm34	96	41.987	ENSMUSG00000033931	Rbm34	58	50.000	Mus_musculus
ENSDARG00000101877	rbm34	99	42.236	MGP_PahariEiJ_G0023329	Rbm34	59	50.781	Mus_pahari
ENSDARG00000101877	rbm34	96	41.562	MGP_SPRETEiJ_G0032849	Rbm34	58	51.172	Mus_spretus
ENSDARG00000101877	rbm34	97	42.320	ENSMPUG00000002849	RBM34	79	44.571	Mustela_putorius_furo
ENSDARG00000101877	rbm34	97	45.938	ENSMLUG00000016224	RBM34	58	55.686	Myotis_lucifugus
ENSDARG00000101877	rbm34	97	45.192	ENSNGAG00000010712	Rbm34	60	52.362	Nannospalax_galili
ENSDARG00000101877	rbm34	100	51.485	ENSNBRG00000010975	rbm34	95	51.372	Neolamprologus_brichardi
ENSDARG00000101877	rbm34	97	46.795	ENSNLEG00000002610	RBM34	78	45.930	Nomascus_leucogenys
ENSDARG00000101877	rbm34	57	50.888	ENSMEUG00000005465	-	95	41.083	Notamacropus_eugenii
ENSDARG00000101877	rbm34	96	43.450	ENSODEG00000006130	RBM34	91	43.956	Octodon_degus
ENSDARG00000101877	rbm34	98	52.862	ENSONIG00000018121	rbm34	91	52.152	Oreochromis_niloticus
ENSDARG00000101877	rbm34	96	46.129	ENSOANG00000001206	RBM34	62	54.717	Ornithorhynchus_anatinus
ENSDARG00000101877	rbm34	98	46.626	ENSOCUG00000009173	RBM34	59	54.615	Oryctolagus_cuniculus
ENSDARG00000101877	rbm34	95	49.492	ENSORLG00000001221	rbm34	93	47.990	Oryzias_latipes
ENSDARG00000101877	rbm34	95	49.324	ENSORLG00020016678	rbm34	93	47.368	Oryzias_latipes_hni
ENSDARG00000101877	rbm34	95	48.299	ENSORLG00015016039	rbm34	95	47.291	Oryzias_latipes_hsok
ENSDARG00000101877	rbm34	100	46.645	ENSOMEG00000007902	rbm34	96	46.420	Oryzias_melastigma
ENSDARG00000101877	rbm34	97	43.333	ENSOGAG00000012470	RBM34	56	52.610	Otolemur_garnettii
ENSDARG00000101877	rbm34	95	45.425	ENSPPAG00000030692	RBM34	77	45.723	Pan_paniscus
ENSDARG00000101877	rbm34	97	44.551	ENSPPRG00000013597	RBM34	78	44.186	Panthera_pardus
ENSDARG00000101877	rbm34	97	44.872	ENSPTIG00000011612	RBM34	78	46.154	Panthera_tigris_altaica
ENSDARG00000101877	rbm34	95	48.039	ENSPTRG00000048646	-	77	49.398	Pan_troglodytes
ENSDARG00000101877	rbm34	95	48.039	ENSPTRG00000032432	RBM34	77	49.398	Pan_troglodytes
ENSDARG00000101877	rbm34	97	45.833	ENSPANG00000010411	RBM34	58	55.600	Papio_anubis
ENSDARG00000101877	rbm34	96	54.266	ENSPKIG00000009284	rbm34	91	52.284	Paramormyrops_kingsleyae
ENSDARG00000101877	rbm34	97	41.748	ENSPSIG00000011370	RBM34	89	40.050	Pelodiscus_sinensis
ENSDARG00000101877	rbm34	72	48.185	ENSPMGG00000001183	rbm34	82	47.855	Periophthalmus_magnuspinnatus
ENSDARG00000101877	rbm34	97	45.541	ENSPEMG00000000265	Rbm34	59	53.488	Peromyscus_maniculatus_bairdii
ENSDARG00000101877	rbm34	78	47.813	ENSPMAG00000001602	rbm34	86	48.438	Petromyzon_marinus
ENSDARG00000101877	rbm34	96	43.175	ENSPCIG00000029736	-	66	44.477	Phascolarctos_cinereus
ENSDARG00000101877	rbm34	97	53.898	ENSPFOG00000009829	-	92	50.508	Poecilia_formosa
ENSDARG00000101877	rbm34	97	53.898	ENSPLAG00000018385	-	91	50.636	Poecilia_latipinna
ENSDARG00000101877	rbm34	97	45.205	ENSPMEG00000014440	-	92	44.246	Poecilia_mexicana
ENSDARG00000101877	rbm34	97	52.365	ENSPREG00000023227	rbm34	95	49.386	Poecilia_reticulata
ENSDARG00000101877	rbm34	97	47.115	ENSPPYG00000029513	RBM34	78	46.512	Pongo_abelii
ENSDARG00000101877	rbm34	97	41.509	ENSPCOG00000018448	RBM34	78	42.939	Propithecus_coquereli
ENSDARG00000101877	rbm34	97	45.455	ENSPVAG00000015158	RBM34	60	53.755	Pteropus_vampyrus
ENSDARG00000101877	rbm34	98	52.667	ENSPNYG00000004970	rbm34	93	52.381	Pundamilia_nyererei
ENSDARG00000101877	rbm34	100	56.908	ENSPNAG00000002639	rbm34	95	55.231	Pygocentrus_nattereri
ENSDARG00000101877	rbm34	97	44.551	ENSRNOG00000020004	Rbm34	59	52.140	Rattus_norvegicus
ENSDARG00000101877	rbm34	97	45.833	ENSRBIG00000032900	RBM34	58	55.600	Rhinopithecus_bieti
ENSDARG00000101877	rbm34	97	45.833	ENSRROG00000039131	RBM34	58	55.600	Rhinopithecus_roxellana
ENSDARG00000101877	rbm34	98	43.574	ENSSHAG00000015812	RBM34	92	40.802	Sarcophilus_harrisii
ENSDARG00000101877	rbm34	97	56.229	ENSSFOG00015000148	rbm34	92	52.000	Scleropages_formosus
ENSDARG00000101877	rbm34	95	49.315	ENSSMAG00000020955	rbm34	91	48.329	Scophthalmus_maximus
ENSDARG00000101877	rbm34	100	45.745	ENSSDUG00000019237	rbm34	96	49.879	Seriola_dumerili
ENSDARG00000101877	rbm34	100	48.000	ENSSLDG00000000796	rbm34	96	47.044	Seriola_lalandi_dorsalis
ENSDARG00000101877	rbm34	95	45.246	ENSSPUG00000015430	RBM34	70	47.335	Sphenodon_punctatus
ENSDARG00000101877	rbm34	99	49.425	ENSSPAG00000010174	rbm34	95	49.633	Stegastes_partitus
ENSDARG00000101877	rbm34	51	61.589	ENSTGUG00000010234	RBM34	94	62.147	Taeniopygia_guttata
ENSDARG00000101877	rbm34	100	50.161	ENSTRUG00000011172	rbm34	95	42.750	Takifugu_rubripes
ENSDARG00000101877	rbm34	95	46.897	ENSTNIG00000001302	-	95	47.429	Tetraodon_nigroviridis
ENSDARG00000101877	rbm34	97	49.329	ENSXETG00000023721	rbm34	82	46.264	Xenopus_tropicalis
ENSDARG00000101877	rbm34	96	43.537	ENSXCOG00000011190	RBM34	93	42.132	Xiphophorus_couchianus
ENSDARG00000101877	rbm34	97	52.525	ENSXMAG00000029852	rbm34	92	49.123	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component