EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000101885 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-20i20.11
Alias: -
Full Name: si:dkey-20i20.11
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6863 bases
Position: chr22:2751887-2758749
Accession: ZDB-GENE-060503-58
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000116650	zf-C2H2	PF00096.26	6.4e-23	1	5
ENSDARP00000116650	zf-C2H2	PF00096.26	6.4e-23	2	5
ENSDARP00000116650	zf-C2H2	PF00096.26	6.4e-23	3	5
ENSDARP00000116650	zf-C2H2	PF00096.26	6.4e-23	4	5
ENSDARP00000116650	zf-C2H2	PF00096.26	6.4e-23	5	5
ENSDARP00000116650	zf-met	PF12874.7	0.0007	1	2
ENSDARP00000116650	zf-met	PF12874.7	0.0007	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000133652	-	703	-	ENSDARP00000116650	195 (aa)	-	A3KPV0

Gene Model

Click here to download ENSDARG00000101885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000101885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000101885	si:dkey-20i20.11	100	83.590	ENSDARG00000092246	si:dkey-20i20.3	85	83.590
ENSDARG00000101885	si:dkey-20i20.11	98	56.284	ENSDARG00000088507	znf982	98	56.284
ENSDARG00000101885	si:dkey-20i20.11	94	53.368	ENSDARG00000113666	znf1173	86	53.368
ENSDARG00000101885	si:dkey-20i20.11	99	71.084	ENSDARG00000094343	si:dkey-20i20.8	80	71.084
ENSDARG00000101885	si:dkey-20i20.11	99	53.846	ENSDARG00000078159	zgc:175284	100	50.000
ENSDARG00000101885	si:dkey-20i20.11	100	86.154	ENSDARG00000071714	znf983	100	86.154
ENSDARG00000101885	si:dkey-20i20.11	98	62.393	ENSDARG00000077085	zgc:110821	92	62.393
ENSDARG00000101885	si:dkey-20i20.11	98	58.242	ENSDARG00000103827	znf1144	94	60.000
ENSDARG00000101885	si:dkey-20i20.11	98	64.474	ENSDARG00000071833	znf1162	100	64.474
ENSDARG00000101885	si:dkey-20i20.11	99	59.639	ENSDARG00000101425	si:dkey-1b17.5	83	60.366
ENSDARG00000101885	si:dkey-20i20.11	98	59.794	ENSDARG00000071725	znf1167	99	59.794
ENSDARG00000101885	si:dkey-20i20.11	98	65.789	ENSDARG00000102053	znf1164	100	66.957
ENSDARG00000101885	si:dkey-20i20.11	100	84.615	ENSDARG00000093562	si:dkey-20i20.7	86	84.615
ENSDARG00000101885	si:dkey-20i20.11	98	70.122	ENSDARG00000092027	si:dkey-20i20.9	72	70.988
ENSDARG00000101885	si:dkey-20i20.11	97	56.364	ENSDARG00000115326	znf1002	90	54.091
ENSDARG00000101885	si:dkey-20i20.11	98	69.634	ENSDARG00000094309	si:ch73-92e7.6	100	69.271
ENSDARG00000101885	si:dkey-20i20.11	98	61.207	ENSDARG00000099618	si:dkey-1b17.6	89	61.207
ENSDARG00000101885	si:dkey-20i20.11	98	55.797	ENSDARG00000100587	zgc:113886	100	41.935
ENSDARG00000101885	si:dkey-20i20.11	70	61.871	ENSDARG00000093875	zgc:174224	73	60.145
ENSDARG00000101885	si:dkey-20i20.11	98	60.825	ENSDARG00000094736	znf1157	99	67.227
ENSDARG00000101885	si:dkey-20i20.11	99	54.404	ENSDARG00000112141	znf1169	86	54.404
ENSDARG00000101885	si:dkey-20i20.11	99	87.047	ENSDARG00000095455	si:dkey-20i20.10	93	87.047
ENSDARG00000101885	si:dkey-20i20.11	99	64.706	ENSDARG00000092088	si:dkey-4c15.8	99	57.042
ENSDARG00000101885	si:dkey-20i20.11	97	57.812	ENSDARG00000111899	zgc:171435	89	57.812
ENSDARG00000101885	si:dkey-20i20.11	77	60.870	ENSDARG00000077712	zgc:113886	96	46.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000101885	si:dkey-20i20.11	98	56.364	ENSMZEG00005027943	-	74	51.852	Maylandia_zebra