EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000102008 (Gene tree)
Gene ID: 503712
Gene Symbol: si:dkey-72l17.6
Alias: -
Full Name: si:dkey-72l17.6
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 6019 bases
Position: chr4:32174137-32180155
Accession: ZDB-GENE-110913-49
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000130868	zf-C2H2	PF00096.26	9.1e-51	1	7
ENSDARP00000130868	zf-C2H2	PF00096.26	9.1e-51	2	7
ENSDARP00000130868	zf-C2H2	PF00096.26	9.1e-51	3	7
ENSDARP00000130868	zf-C2H2	PF00096.26	9.1e-51	4	7
ENSDARP00000130868	zf-C2H2	PF00096.26	9.1e-51	5	7
ENSDARP00000130868	zf-C2H2	PF00096.26	9.1e-51	6	7
ENSDARP00000130868	zf-C2H2	PF00096.26	9.1e-51	7	7
ENSDARP00000133617	zf-C2H2	PF00096.26	1.7e-50	1	7
ENSDARP00000133617	zf-C2H2	PF00096.26	1.7e-50	2	7
ENSDARP00000133617	zf-C2H2	PF00096.26	1.7e-50	3	7
ENSDARP00000133617	zf-C2H2	PF00096.26	1.7e-50	4	7
ENSDARP00000133617	zf-C2H2	PF00096.26	1.7e-50	5	7
ENSDARP00000133617	zf-C2H2	PF00096.26	1.7e-50	6	7
ENSDARP00000133617	zf-C2H2	PF00096.26	1.7e-50	7	7
ENSDARP00000106979	zf-C2H2	PF00096.26	7.4e-31	1	4
ENSDARP00000106979	zf-C2H2	PF00096.26	7.4e-31	2	4
ENSDARP00000106979	zf-C2H2	PF00096.26	7.4e-31	3	4
ENSDARP00000106979	zf-C2H2	PF00096.26	7.4e-31	4	4
ENSDARP00000133617	zf-met	PF12874.7	2.7e-07	1	1
ENSDARP00000130868	zf-met	PF12874.7	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000158835	-	981	-	ENSDARP00000133617	326 (aa)	-	A0A0G2KMM6
ENSDART00000124106	-	822	-	ENSDARP00000106979	273 (aa)	-	F1Q8I7
ENSDART00000164151	-	1902	XM_017355501	ENSDARP00000130868	323 (aa)	XP_017210990	H0WE71

Gene Model

Click here to download ENSDARG00000102008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000102008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000102008	si:dkey-72l17.6	99	91.277	ENSDARG00000102561	AL645691.1	97	91.705
ENSDARG00000102008	si:dkey-72l17.6	99	62.759	ENSDARG00000093994	znf1058	100	70.683
ENSDARG00000102008	si:dkey-72l17.6	99	60.950	ENSDARG00000103636	zgc:173702	99	65.546
ENSDARG00000102008	si:dkey-72l17.6	99	94.099	ENSDARG00000114793	CU182823.4	98	95.392
ENSDARG00000102008	si:dkey-72l17.6	100	70.336	ENSDARG00000110658	zgc:174696	99	70.336
ENSDARG00000102008	si:dkey-72l17.6	99	60.686	ENSDARG00000105306	si:dkeyp-44b5.5	99	63.863
ENSDARG00000102008	si:dkey-72l17.6	100	71.268	ENSDARG00000096189	si:dkey-54j5.2	99	71.084
ENSDARG00000102008	si:dkey-72l17.6	99	66.480	ENSDARG00000115655	znf1078	99	65.642
ENSDARG00000102008	si:dkey-72l17.6	99	67.705	ENSDARG00000098430	znf1078	99	66.572
ENSDARG00000102008	si:dkey-72l17.6	79	51.639	ENSDARG00000091393	si:ch211-161m3.6	96	57.554
ENSDARG00000102008	si:dkey-72l17.6	99	48.958	ENSDARG00000104678	CU467646.6	89	48.136
ENSDARG00000102008	si:dkey-72l17.6	99	48.246	ENSDARG00000086223	si:ch73-144d13.4	100	48.246
ENSDARG00000102008	si:dkey-72l17.6	99	71.268	ENSDARG00000105137	zgc:173705	99	69.880
ENSDARG00000102008	si:dkey-72l17.6	100	72.676	ENSDARG00000115450	CABZ01012382.1	99	71.268
ENSDARG00000102008	si:dkey-72l17.6	99	61.214	ENSDARG00000103471	si:dkey-199m13.4	99	66.387
ENSDARG00000102008	si:dkey-72l17.6	99	59.615	ENSDARG00000092938	znf1047	99	69.721
ENSDARG00000102008	si:dkey-72l17.6	99	68.023	ENSDARG00000098536	si:dkey-25i10.1	100	68.023
ENSDARG00000102008	si:dkey-72l17.6	99	47.368	ENSDARG00000101365	si:cabz01021430.2	100	53.448
ENSDARG00000102008	si:dkey-72l17.6	98	54.015	ENSDARG00000074365	zgc:171901	100	71.875
ENSDARG00000102008	si:dkey-72l17.6	99	61.214	ENSDARG00000090160	zgc:173709	99	70.320
ENSDARG00000102008	si:dkey-72l17.6	99	60.422	ENSDARG00000102673	si:dkey-26i24.1	99	65.546
ENSDARG00000102008	si:dkey-72l17.6	99	65.116	ENSDARG00000100961	zgc:174653	92	73.894
ENSDARG00000102008	si:dkey-72l17.6	100	71.549	ENSDARG00000100001	znf1096	99	70.281
ENSDARG00000102008	si:dkey-72l17.6	99	46.483	ENSDARG00000096828	si:ch73-144d13.7	96	46.483
ENSDARG00000102008	si:dkey-72l17.6	99	56.971	ENSDARG00000104074	znf1052	99	70.518
ENSDARG00000102008	si:dkey-72l17.6	99	62.005	ENSDARG00000110229	zgc:173702	99	66.387
ENSDARG00000102008	si:dkey-72l17.6	99	60.577	ENSDARG00000102600	CABZ01003344.1	99	70.518
ENSDARG00000102008	si:dkey-72l17.6	99	59.375	ENSDARG00000098986	znf1040	99	70.518
ENSDARG00000102008	si:dkey-72l17.6	91	61.690	ENSDARG00000116920	BX465848.2	91	75.258
ENSDARG00000102008	si:dkey-72l17.6	99	49.032	ENSDARG00000105692	CABZ01069022.1	99	49.020
ENSDARG00000102008	si:dkey-72l17.6	99	60.950	ENSDARG00000094558	si:dkeyp-53e4.1	99	65.546
ENSDARG00000102008	si:dkey-72l17.6	99	69.296	ENSDARG00000114437	zgc:173705	99	69.296
ENSDARG00000102008	si:dkey-72l17.6	99	62.946	ENSDARG00000102837	znf1145	100	69.500
ENSDARG00000102008	si:dkey-72l17.6	99	64.966	ENSDARG00000103310	znf1053	99	64.966
ENSDARG00000102008	si:dkey-72l17.6	99	73.984	ENSDARG00000076272	znf1041	99	74.502
ENSDARG00000102008	si:dkey-72l17.6	99	71.600	ENSDARG00000098071	znf1049	99	71.600
ENSDARG00000102008	si:dkey-72l17.6	84	75.916	ENSDARG00000116177	znf1127	95	75.916
ENSDARG00000102008	si:dkey-72l17.6	100	68.526	ENSDARG00000088000	znf1057	99	68.548
ENSDARG00000102008	si:dkey-72l17.6	100	71.560	ENSDARG00000102791	zgc:174704	99	71.560
ENSDARG00000102008	si:dkey-72l17.6	99	58.219	ENSDARG00000091477	znf1066	100	64.400
ENSDARG00000102008	si:dkey-72l17.6	99	67.598	ENSDARG00000098196	znf1077	99	66.856
ENSDARG00000102008	si:dkey-72l17.6	100	93.808	ENSDARG00000113808	si:dkeyp-82b4.6	96	93.808
ENSDARG00000102008	si:dkey-72l17.6	99	62.113	ENSDARG00000104407	BX649453.1	99	57.474
ENSDARG00000102008	si:dkey-72l17.6	99	59.856	ENSDARG00000091994	znf1048	99	70.120
ENSDARG00000102008	si:dkey-72l17.6	99	71.713	ENSDARG00000101137	znf999	97	76.471
ENSDARG00000102008	si:dkey-72l17.6	100	71.831	ENSDARG00000112725	si:dkey-22h13.2	99	69.880
ENSDARG00000102008	si:dkey-72l17.6	100	95.666	ENSDARG00000112103	si:dkey-16p19.1	99	97.235
ENSDARG00000102008	si:dkey-72l17.6	98	48.503	ENSDARG00000074298	znf1015	99	51.765
ENSDARG00000102008	si:dkey-72l17.6	100	66.932	ENSDARG00000086449	znf1055	99	66.932
ENSDARG00000102008	si:dkey-72l17.6	99	66.201	ENSDARG00000101327	znf1076	99	65.084
ENSDARG00000102008	si:dkey-72l17.6	99	66.760	ENSDARG00000099736	CABZ01075078.1	99	65.156
ENSDARG00000102008	si:dkey-72l17.6	100	72.676	ENSDARG00000109381	CU457778.2	99	71.268
ENSDARG00000102008	si:dkey-72l17.6	86	73.039	ENSDARG00000112606	BX248128.2	99	73.039
ENSDARG00000102008	si:dkey-72l17.6	90	64.939	ENSDARG00000095605	CR846087.3	99	64.087
ENSDARG00000102008	si:dkey-72l17.6	99	70.916	ENSDARG00000098270	znf1053	99	70.916
ENSDARG00000102008	si:dkey-72l17.6	99	72.112	ENSDARG00000096210	znf1050	99	72.112
ENSDARG00000102008	si:dkey-72l17.6	99	67.442	ENSDARG00000100509	si:dkey-82i20.2	100	67.442
ENSDARG00000102008	si:dkey-72l17.6	99	60.158	ENSDARG00000096041	si:ch211-162i8.2	99	67.797
ENSDARG00000102008	si:dkey-72l17.6	99	45.946	ENSDARG00000089715	si:cabz01054394.7	96	45.946
ENSDARG00000102008	si:dkey-72l17.6	99	66.667	ENSDARG00000116216	znf1046	99	70.120
ENSDARG00000102008	si:dkey-72l17.6	86	91.367	ENSDARG00000100653	si:dkeyp-82b4.6	98	91.367
ENSDARG00000102008	si:dkey-72l17.6	99	92.166	ENSDARG00000111550	CABZ01002702.1	99	92.166
ENSDARG00000102008	si:dkey-72l17.6	99	67.598	ENSDARG00000114947	BX465848.1	99	66.760
ENSDARG00000102008	si:dkey-72l17.6	100	70.642	ENSDARG00000098087	si:dkey-30f3.2	99	70.807
ENSDARG00000102008	si:dkey-72l17.6	100	90.093	ENSDARG00000103721	si:dkey-122c11.7	100	90.093
ENSDARG00000102008	si:dkey-72l17.6	99	58.684	ENSDARG00000098901	CABZ01002768.1	100	60.062
ENSDARG00000102008	si:dkey-72l17.6	100	67.606	ENSDARG00000089814	znf1042	99	72.112
ENSDARG00000102008	si:dkey-72l17.6	98	50.735	ENSDARG00000075417	zgc:175107	98	50.735
ENSDARG00000102008	si:dkey-72l17.6	99	59.103	ENSDARG00000100842	si:ch211-223a21.4	99	66.525
ENSDARG00000102008	si:dkey-72l17.6	99	69.323	ENSDARG00000105067	znf1043	99	69.323
ENSDARG00000102008	si:dkey-72l17.6	91	68.196	ENSDARG00000103495	zgc:173714	99	68.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000102008	si:dkey-72l17.6	77	38.621	ENSCSEG00000011817	-	60	38.621	Cynoglossus_semilaevis
ENSDARG00000102008	si:dkey-72l17.6	99	44.737	ENSFHEG00000020010	-	57	44.737	Fundulus_heteroclitus
ENSDARG00000102008	si:dkey-72l17.6	77	41.667	ENSOMEG00000005928	-	53	41.053	Oryzias_melastigma
ENSDARG00000102008	si:dkey-72l17.6	74	44.037	ENSPFOG00000005998	-	55	46.392	Poecilia_formosa
ENSDARG00000102008	si:dkey-72l17.6	77	37.324	ENSSPAG00000017203	-	52	37.410	Stegastes_partitus
ENSDARG00000102008	si:dkey-72l17.6	70	38.462	ENSXMAG00000024816	-	50	36.735	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function