EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000102087 (Gene tree)
Gene ID: -
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5634 bases
Position: chr16:54674556-54680189
Accession: ZDB-GENE-120911-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000130538	POP1	PF06978.11	4.2e-33	1	2
ENSDARP00000130538	POP1	PF06978.11	4.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000167040	-	1502	-	ENSDARP00000130538	455 (aa)	-	A0A0R4ICC3

Gene Model

Click here to download ENSDARG00000102087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000102087's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000102087	pop1	94	48.590	ENSG00000104356	POP1	51	53.608	Homo_sapiens
ENSDARG00000102087	pop1	98	55.078	ENSAPOG00000008198	pop1	52	55.078	Acanthochromis_polyacanthus
ENSDARG00000102087	pop1	99	53.659	ENSACIG00000004169	POP1	51	53.252	Amphilophus_citrinellus
ENSDARG00000102087	pop1	99	54.070	ENSAOCG00000010991	pop1	52	54.651	Amphiprion_ocellaris
ENSDARG00000102087	pop1	99	52.236	ENSAPEG00000007607	pop1	52	52.439	Amphiprion_percula
ENSDARG00000102087	pop1	99	54.102	ENSATEG00000024814	POP1	52	55.078	Anabas_testudineus
ENSDARG00000102087	pop1	87	47.907	ENSACAG00000016083	POP1	52	42.586	Anolis_carolinensis
ENSDARG00000102087	pop1	98	53.772	ENSACLG00000010951	pop1	53	55.126	Astatotilapia_calliptera
ENSDARG00000102087	pop1	99	55.273	ENSAMXG00000014483	POP1	51	55.273	Astyanax_mexicanus
ENSDARG00000102087	pop1	99	45.489	ENSCJAG00000015567	POP1	51	45.489	Callithrix_jacchus
ENSDARG00000102087	pop1	99	45.543	ENSCCAG00000018939	POP1	80	48.122	Cebus_capucinus
ENSDARG00000102087	pop1	99	52.481	ENSCSEG00000008737	POP1	53	52.863	Cynoglossus_semilaevis
ENSDARG00000102087	pop1	99	54.688	ENSCVAG00000022248	pop1	53	55.664	Cyprinodon_variegatus
ENSDARG00000102087	pop1	97	45.094	ENSEBUG00000009897	pop1	96	44.699	Eptatretus_burgeri
ENSDARG00000102087	pop1	99	55.361	ENSELUG00000003526	pop1	54	55.253	Esox_lucius
ENSDARG00000102087	pop1	99	43.762	ENSFALG00000005711	POP1	51	44.466	Ficedula_albicollis
ENSDARG00000102087	pop1	99	54.921	ENSFHEG00000019518	pop1	52	55.315	Fundulus_heteroclitus
ENSDARG00000102087	pop1	97	53.975	ENSGMOG00000000659	POP1	50	53.975	Gadus_morhua
ENSDARG00000102087	pop1	98	53.846	ENSGAFG00000019770	POP1	53	53.846	Gambusia_affinis
ENSDARG00000102087	pop1	98	51.498	ENSGACG00000003499	pop1	52	51.685	Gasterosteus_aculeatus
ENSDARG00000102087	pop1	98	53.295	ENSHBUG00000021583	pop1	53	54.457	Haplochromis_burtoni
ENSDARG00000102087	pop1	99	56.600	ENSIPUG00000018336	pop1	50	56.400	Ictalurus_punctatus
ENSDARG00000102087	pop1	98	53.663	ENSKMAG00000001346	POP1	53	54.653	Kryptolebias_marmoratus
ENSDARG00000102087	pop1	99	50.207	ENSLBEG00000024457	POP1	52	50.207	Labrus_bergylta
ENSDARG00000102087	pop1	99	51.803	ENSLOCG00000009817	POP1	52	51.613	Lepisosteus_oculatus
ENSDARG00000102087	pop1	98	53.891	ENSMAMG00000004040	pop1	52	53.891	Mastacembelus_armatus
ENSDARG00000102087	pop1	98	53.965	ENSMZEG00005025448	pop1	53	54.932	Maylandia_zebra
ENSDARG00000102087	pop1	99	44.380	ENSMGAG00000012167	POP1	50	44.961	Meleagris_gallopavo
ENSDARG00000102087	pop1	98	51.540	ENSMMOG00000018242	pop1	51	51.434	Mola_mola
ENSDARG00000102087	pop1	98	54.183	ENSMALG00000012621	POP1	51	54.183	Monopterus_albus
ENSDARG00000102087	pop1	99	45.265	MGP_CAROLIEiJ_G0019726	Pop1	52	45.265	Mus_caroli
ENSDARG00000102087	pop1	99	47.727	ENSMLUG00000010204	POP1	52	47.727	Myotis_lucifugus
ENSDARG00000102087	pop1	99	52.282	ENSNBRG00000002356	pop1	50	51.867	Neolamprologus_brichardi
ENSDARG00000102087	pop1	98	46.388	ENSOPRG00000007667	POP1	52	46.388	Ochotona_princeps
ENSDARG00000102087	pop1	98	53.682	ENSONIG00000016445	pop1	53	54.651	Oreochromis_niloticus
ENSDARG00000102087	pop1	79	39.820	ENSOANG00000001278	-	62	47.321	Ornithorhynchus_anatinus
ENSDARG00000102087	pop1	99	51.772	ENSORLG00000002839	pop1	53	53.400	Oryzias_latipes
ENSDARG00000102087	pop1	99	51.670	ENSORLG00015012746	POP1	53	52.652	Oryzias_latipes_hsok
ENSDARG00000102087	pop1	99	54.108	ENSOMEG00000006915	pop1	53	53.908	Oryzias_melastigma
ENSDARG00000102087	pop1	50	44.788	ENSOARG00000003457	-	58	44.788	Ovis_aries
ENSDARG00000102087	pop1	99	52.326	ENSPKIG00000016325	POP1	53	52.713	Paramormyrops_kingsleyae
ENSDARG00000102087	pop1	99	48.780	ENSPMGG00000022253	POP1	51	48.394	Periophthalmus_magnuspinnatus
ENSDARG00000102087	pop1	98	54.438	ENSPFOG00000012490	POP1	53	53.846	Poecilia_formosa
ENSDARG00000102087	pop1	98	54.545	ENSPLAG00000004646	POP1	53	53.755	Poecilia_latipinna
ENSDARG00000102087	pop1	98	53.846	ENSPMEG00000019592	POP1	53	53.649	Poecilia_mexicana
ENSDARG00000102087	pop1	98	54.224	ENSPREG00000020951	POP1	53	54.813	Poecilia_reticulata
ENSDARG00000102087	pop1	99	55.424	ENSPNAG00000000265	pop1	51	55.424	Pygocentrus_nattereri
ENSDARG00000102087	pop1	99	52.290	ENSSFOG00015007429	pop1	53	52.290	Scleropages_formosus
ENSDARG00000102087	pop1	98	55.579	ENSSMAG00000010467	POP1	51	55.789	Scophthalmus_maximus
ENSDARG00000102087	pop1	98	52.611	ENSSDUG00000007817	POP1	52	53.191	Seriola_dumerili
ENSDARG00000102087	pop1	98	52.998	ENSSLDG00000012565	POP1	52	53.578	Seriola_lalandi_dorsalis
ENSDARG00000102087	pop1	99	53.074	ENSSPAG00000014955	pop1	52	53.279	Stegastes_partitus
ENSDARG00000102087	pop1	59	51.079	ENSTGUG00000014352	-	95	51.079	Taeniopygia_guttata
ENSDARG00000102087	pop1	99	51.318	ENSTRUG00000010856	pop1	52	51.318	Takifugu_rubripes
ENSDARG00000102087	pop1	96	47.551	ENSUAMG00000017309	POP1	50	47.347	Ursus_americanus
ENSDARG00000102087	pop1	98	49.320	ENSXCOG00000017043	POP1	53	49.903	Xiphophorus_couchianus
ENSDARG00000102087	pop1	98	53.543	ENSXMAG00000002472	POP1	53	53.543	Xiphophorus_maculatus