EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000102353 (Gene tree)
Gene ID: -
Gene Symbol: ddx47
Alias: si:ch1073-304j18.2|zgc:112350
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 10839 bases
Position: chr3:1378098-1388936
Accession: ZDB-GENE-050522-359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000134322	DEAD	PF00270.29	2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000163535	-	906	-	ENSDARP00000132528	270 (aa)	-	A0A0R4IH57
ENSDART00000171278	-	477	-	ENSDARP00000134322	159 (aa)	-	A0A0R4IKR1

Gene Model

Click here to download ENSDARG00000102353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000102353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000102353	ddx47	52	39.560	ENSDARG00000099739	CABZ01072952.1	53	39.560
ENSDARG00000102353	ddx47	64	40.594	ENSDARG00000016477	eif4a2	68	40.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000102353	ddx47	79	69.048	MGP_CAROLIEiJ_G0028986	Ddx47	54	80.612	Mus_caroli
ENSDARG00000102353	ddx47	79	69.841	ENSMUSG00000030204	Ddx47	54	81.633	Mus_musculus
ENSDARG00000102353	ddx47	79	69.048	MGP_PahariEiJ_G0022748	Ddx47	54	81.633	Mus_pahari
ENSDARG00000102353	ddx47	79	69.841	MGP_SPRETEiJ_G0030034	Ddx47	54	81.633	Mus_spretus
ENSDARG00000102353	ddx47	62	80.808	ENSXETG00000032749	-	78	80.808	Xenopus_tropicalis