EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000102401 (Gene tree)
Gene ID: 798270
Gene Symbol: znf1001
Alias: zgc:174234
Full Name: zinc finger protein 1001
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 10279 bases
Position: chr3:7395174-7405452
Accession: ZDB-GENE-080213-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	1	11
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	2	11
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	3	11
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	4	11
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	5	11
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	6	11
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	7	11
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	8	11
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	9	11
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	10	11
ENSDARP00000130546	zf-C2H2	PF00096.26	1.7e-59	11	11
ENSDARP00000130546	zf-met	PF12874.7	8.5e-17	1	4
ENSDARP00000130546	zf-met	PF12874.7	8.5e-17	2	4
ENSDARP00000130546	zf-met	PF12874.7	8.5e-17	3	4
ENSDARP00000130546	zf-met	PF12874.7	8.5e-17	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000165832	-	1369	-	ENSDARP00000130546	360 (aa)	-	A0A0G2KE30

Gene Model

Click here to download ENSDARG00000102401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000102401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000102401	znf1001	93	60.643	ENSDARG00000100587	zgc:113886	81	60.643
ENSDARG00000102401	znf1001	96	54.167	ENSDARG00000111614	znf1183	89	52.652
ENSDARG00000102401	znf1001	99	48.747	ENSDARG00000103954	znf1152	94	50.838
ENSDARG00000102401	znf1001	93	56.081	ENSDARG00000110710	CU210890.1	94	56.081
ENSDARG00000102401	znf1001	100	60.825	ENSDARG00000098923	zgc:173577	99	60.825
ENSDARG00000102401	znf1001	100	57.452	ENSDARG00000100803	zgc:173517	95	63.235
ENSDARG00000102401	znf1001	98	59.659	ENSDARG00000099890	CU207221.2	99	59.659
ENSDARG00000102401	znf1001	96	55.294	ENSDARG00000096851	znf1143	100	55.294
ENSDARG00000102401	znf1001	93	64.912	ENSDARG00000100915	si:ch211-255f4.7	100	64.912
ENSDARG00000102401	znf1001	96	59.211	ENSDARG00000097521	si:dkey-111k8.5	89	56.024
ENSDARG00000102401	znf1001	98	49.045	ENSDARG00000078159	zgc:175284	88	49.275
ENSDARG00000102401	znf1001	98	48.276	ENSDARG00000101093	zgc:162971	90	48.276
ENSDARG00000102401	znf1001	100	50.882	ENSDARG00000105074	BX000701.2	95	55.051
ENSDARG00000102401	znf1001	95	44.516	ENSDARG00000104807	si:ch73-221f6.3	65	44.516
ENSDARG00000102401	znf1001	93	62.278	ENSDARG00000105056	znf45l	93	55.060
ENSDARG00000102401	znf1001	97	64.912	ENSDARG00000100882	znf1154	77	54.698
ENSDARG00000102401	znf1001	100	50.588	ENSDARG00000099172	BX000701.1	91	59.596
ENSDARG00000102401	znf1001	98	63.158	ENSDARG00000111465	znf1104	91	49.582
ENSDARG00000102401	znf1001	93	53.420	ENSDARG00000094484	si:ch211-162i8.4	100	52.679
ENSDARG00000102401	znf1001	98	47.333	ENSDARG00000089940	znf1008	97	46.364
ENSDARG00000102401	znf1001	96	47.923	ENSDARG00000099618	si:dkey-1b17.6	91	47.977
ENSDARG00000102401	znf1001	95	48.057	ENSDARG00000105075	BX324216.2	84	48.057
ENSDARG00000102401	znf1001	100	53.933	ENSDARG00000113011	zgc:113102	95	50.996
ENSDARG00000102401	znf1001	99	49.394	ENSDARG00000102678	znf1181	79	51.172
ENSDARG00000102401	znf1001	97	55.357	ENSDARG00000098021	si:dkey-111k8.2	87	58.586
ENSDARG00000102401	znf1001	96	53.968	ENSDARG00000078281	zgc:173575	87	60.714
ENSDARG00000102401	znf1001	95	42.857	ENSDARG00000058562	znf991	92	42.857
ENSDARG00000102401	znf1001	94	46.522	ENSDARG00000102959	zgc:171220	95	46.522
ENSDARG00000102401	znf1001	98	47.564	ENSDARG00000105295	LO017784.1	66	47.564
ENSDARG00000102401	znf1001	100	56.971	ENSDARG00000098248	CABZ01081730.1	95	62.500
ENSDARG00000102401	znf1001	98	50.357	ENSDARG00000109255	si:ch211-234c11.2	92	49.107
ENSDARG00000102401	znf1001	98	46.875	ENSDARG00000087839	si:dkey-33c14.6	94	46.875
ENSDARG00000102401	znf1001	96	54.328	ENSDARG00000098604	si:dkey-14o6.4	87	54.328
ENSDARG00000102401	znf1001	97	48.828	ENSDARG00000099986	si:ch211-207i20.2	62	48.828
ENSDARG00000102401	znf1001	98	49.292	ENSDARG00000101694	znf1184	85	49.292
ENSDARG00000102401	znf1001	96	47.727	ENSDARG00000101562	znf1014	90	47.727
ENSDARG00000102401	znf1001	95	45.515	ENSDARG00000071589	si:dkey-253d23.2	97	44.928
ENSDARG00000102401	znf1001	98	57.790	ENSDARG00000099917	znf1005	99	57.790
ENSDARG00000102401	znf1001	100	61.340	ENSDARG00000103530	zgc:113102	99	61.340
ENSDARG00000102401	znf1001	97	48.819	ENSDARG00000094736	znf1157	88	54.762
ENSDARG00000102401	znf1001	98	51.479	ENSDARG00000113626	znf976	99	50.298
ENSDARG00000102401	znf1001	98	45.192	ENSDARG00000071790	znf1153	81	44.413
ENSDARG00000102401	znf1001	93	69.231	ENSDARG00000090740	zmp:0000001003	100	69.231
ENSDARG00000102401	znf1001	100	54.327	ENSDARG00000099731	CABZ01066719.1	97	60.714
ENSDARG00000102401	znf1001	98	46.685	ENSDARG00000087290	si:ch211-202h22.10	94	46.567
ENSDARG00000102401	znf1001	93	56.902	ENSDARG00000088051	AL935044.1	99	53.067
ENSDARG00000102401	znf1001	93	67.958	ENSDARG00000103777	znf1001	99	64.423
ENSDARG00000102401	znf1001	100	99.722	ENSDARG00000115857	znf1001	100	99.722
ENSDARG00000102401	znf1001	99	46.133	ENSDARG00000102282	CABZ01063298.1	95	46.133
ENSDARG00000102401	znf1001	95	47.670	ENSDARG00000104798	BX510922.2	86	47.670
ENSDARG00000102401	znf1001	84	52.318	ENSDARG00000104065	znf1154	87	51.964
ENSDARG00000102401	znf1001	93	66.368	ENSDARG00000109703	FO834825.1	84	66.368
ENSDARG00000102401	znf1001	96	60.058	ENSDARG00000077712	zgc:113886	99	61.493
ENSDARG00000102401	znf1001	93	60.643	ENSDARG00000093378	si:ch211-235i11.5	84	60.643
ENSDARG00000102401	znf1001	99	48.333	ENSDARG00000097928	si:ch73-40a17.4	82	48.333
ENSDARG00000102401	znf1001	100	61.022	ENSDARG00000102411	CR847850.1	98	59.910
ENSDARG00000102401	znf1001	95	45.659	ENSDARG00000104904	si:ch73-221f6.1	61	43.658
ENSDARG00000102401	znf1001	97	63.959	ENSDARG00000053165	zgc:113377	80	63.959
ENSDARG00000102401	znf1001	93	49.401	ENSDARG00000014775	zgc:113220	91	49.401
ENSDARG00000102401	znf1001	94	47.550	ENSDARG00000098898	si:ch211-255f4.2	99	47.550
ENSDARG00000102401	znf1001	93	58.683	ENSDARG00000115737	AL954741.2	99	58.683
ENSDARG00000102401	znf1001	96	51.475	ENSDARG00000088507	znf982	83	67.708
ENSDARG00000102401	znf1001	97	54.237	ENSDARG00000069869	zgc:113030	98	54.237
ENSDARG00000102401	znf1001	100	57.738	ENSDARG00000091679	FO704858.1	99	57.738
ENSDARG00000102401	znf1001	99	52.174	ENSDARG00000071714	znf983	93	52.174
ENSDARG00000102401	znf1001	98	48.193	ENSDARG00000079760	zgc:112998	85	48.193
ENSDARG00000102401	znf1001	100	60.547	ENSDARG00000106565	CABZ01066720.1	96	57.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000102401	znf1001	98	47.024	ENSACIG00000007882	-	78	47.024	Amphilophus_citrinellus
ENSDARG00000102401	znf1001	94	46.245	ENSACIG00000000360	si:ch211-241b2.1	88	46.245	Amphilophus_citrinellus
ENSDARG00000102401	znf1001	93	46.429	ENSACIG00000008886	znf1164	81	46.429	Amphilophus_citrinellus
ENSDARG00000102401	znf1001	93	43.182	ENSACLG00000017449	-	59	43.182	Astatotilapia_calliptera
ENSDARG00000102401	znf1001	94	54.237	ENSAMXG00000043291	-	68	54.237	Astyanax_mexicanus
ENSDARG00000102401	znf1001	93	50.990	ENSAMXG00000029660	-	56	50.990	Astyanax_mexicanus
ENSDARG00000102401	znf1001	97	43.226	ENSEBUG00000015073	-	82	41.905	Eptatretus_burgeri
ENSDARG00000102401	znf1001	93	49.000	ENSFHEG00000018009	-	51	49.000	Fundulus_heteroclitus
ENSDARG00000102401	znf1001	93	44.144	ENSFHEG00000013152	-	65	44.144	Fundulus_heteroclitus
ENSDARG00000102401	znf1001	93	49.133	ENSHBUG00000018916	-	61	47.807	Haplochromis_burtoni
ENSDARG00000102401	znf1001	99	46.154	ENSKMAG00000009563	-	75	51.587	Kryptolebias_marmoratus
ENSDARG00000102401	znf1001	99	47.907	ENSMZEG00005027943	-	96	51.701	Maylandia_zebra
ENSDARG00000102401	znf1001	93	47.273	ENSMZEG00005005162	-	84	47.273	Maylandia_zebra
ENSDARG00000102401	znf1001	93	42.177	ENSMZEG00005025568	-	80	42.177	Maylandia_zebra
ENSDARG00000102401	znf1001	95	52.193	ENSMZEG00005027793	-	77	52.193	Maylandia_zebra
ENSDARG00000102401	znf1001	93	52.727	ENSMZEG00005007426	-	65	52.727	Maylandia_zebra
ENSDARG00000102401	znf1001	94	50.350	ENSMZEG00005025729	-	88	50.350	Maylandia_zebra
ENSDARG00000102401	znf1001	94	40.714	ENSMZEG00005022161	-	95	40.870	Maylandia_zebra
ENSDARG00000102401	znf1001	93	50.515	ENSMZEG00005026470	-	62	50.515	Maylandia_zebra
ENSDARG00000102401	znf1001	100	44.538	ENSMZEG00005021426	-	82	44.538	Maylandia_zebra
ENSDARG00000102401	znf1001	93	38.182	ENSMALG00000008638	-	64	38.182	Monopterus_albus
ENSDARG00000102401	znf1001	100	42.722	ENSMALG00000018074	-	67	43.189	Monopterus_albus
ENSDARG00000102401	znf1001	97	47.405	ENSNBRG00000000577	-	77	46.768	Neolamprologus_brichardi
ENSDARG00000102401	znf1001	97	43.636	ENSONIG00000013908	-	100	43.636	Oreochromis_niloticus
ENSDARG00000102401	znf1001	93	39.855	ENSONIG00000006585	-	100	36.943	Oreochromis_niloticus
ENSDARG00000102401	znf1001	93	41.954	ENSONIG00000003363	-	100	41.954	Oreochromis_niloticus
ENSDARG00000102401	znf1001	94	50.000	ENSORLG00020019341	-	81	61.905	Oryzias_latipes_hni
ENSDARG00000102401	znf1001	99	38.728	ENSPMGG00000001558	znf1174	83	38.728	Periophthalmus_magnuspinnatus
ENSDARG00000102401	znf1001	94	47.368	ENSPFOG00000001144	-	100	45.736	Poecilia_formosa
ENSDARG00000102401	znf1001	97	46.996	ENSPLAG00000016561	zgc:113348	90	44.361	Poecilia_latipinna
ENSDARG00000102401	znf1001	93	45.635	ENSPMEG00000007573	zgc:113343	63	45.635	Poecilia_mexicana
ENSDARG00000102401	znf1001	99	37.671	ENSPREG00000005538	-	75	37.671	Poecilia_reticulata
ENSDARG00000102401	znf1001	98	46.087	ENSPREG00000014105	-	82	46.087	Poecilia_reticulata
ENSDARG00000102401	znf1001	93	45.238	ENSPREG00000001514	zgc:113343	63	45.238	Poecilia_reticulata
ENSDARG00000102401	znf1001	88	41.611	ENSPNYG00000024183	zgc:173577	99	41.611	Pundamilia_nyererei
ENSDARG00000102401	znf1001	93	41.333	ENSSPAG00000006539	-	97	41.333	Stegastes_partitus
ENSDARG00000102401	znf1001	98	40.936	ENSSPAG00000009426	-	66	40.936	Stegastes_partitus
ENSDARG00000102401	znf1001	95	49.153	ENSTNIG00000000277	-	94	49.153	Tetraodon_nigroviridis
ENSDARG00000102401	znf1001	99	45.238	ENSXCOG00000017871	zgc:113343	76	45.238	Xiphophorus_couchianus
ENSDARG00000102401	znf1001	97	45.238	ENSXMAG00000019923	zgc:113343	65	45.238	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function