EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000102411 (Gene tree)
Gene ID: -
Gene Symbol: CR847850.1
Alias: -
Full Name: zinc finger protein 271-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 1131 bases
Position: chr3:7435802-7436932
Accession: 100534733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000133978	zf-C2H2	PF00096.26	6.1e-41	1	8
ENSDARP00000133978	zf-C2H2	PF00096.26	6.1e-41	2	8
ENSDARP00000133978	zf-C2H2	PF00096.26	6.1e-41	3	8
ENSDARP00000133978	zf-C2H2	PF00096.26	6.1e-41	4	8
ENSDARP00000133978	zf-C2H2	PF00096.26	6.1e-41	5	8
ENSDARP00000133978	zf-C2H2	PF00096.26	6.1e-41	6	8
ENSDARP00000133978	zf-C2H2	PF00096.26	6.1e-41	7	8
ENSDARP00000133978	zf-C2H2	PF00096.26	6.1e-41	8	8
ENSDARP00000133978	zf-met	PF12874.7	1.4e-08	1	2
ENSDARP00000133978	zf-met	PF12874.7	1.4e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000163501	CR847850.1-201	987	XM_005168238	ENSDARP00000133978	328 (aa)	XP_005168295	A0A0G2KNM8

Gene Model

Click here to download ENSDARG00000102411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000102411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000102411	CR847850.1	96	58.131	ENSDARG00000099890	CU207221.2	99	61.710
ENSDARG00000102411	CR847850.1	91	55.859	ENSDARG00000110710	CU210890.1	96	53.158
ENSDARG00000102411	CR847850.1	97	60.853	ENSDARG00000053165	zgc:113377	80	60.853
ENSDARG00000102411	CR847850.1	91	46.953	ENSDARG00000105075	BX324216.2	84	47.479
ENSDARG00000102411	CR847850.1	90	69.291	ENSDARG00000090740	zmp:0000001003	100	69.291
ENSDARG00000102411	CR847850.1	99	56.533	ENSDARG00000099731	CABZ01066719.1	97	63.376
ENSDARG00000102411	CR847850.1	99	55.956	ENSDARG00000091679	FO704858.1	99	55.052
ENSDARG00000102411	CR847850.1	95	59.716	ENSDARG00000073821	znf1177	75	59.716
ENSDARG00000102411	CR847850.1	98	52.561	ENSDARG00000105074	BX000701.2	100	55.272
ENSDARG00000102411	CR847850.1	91	59.871	ENSDARG00000105056	znf45l	99	61.246
ENSDARG00000102411	CR847850.1	95	46.341	ENSDARG00000115737	AL954741.2	99	46.341
ENSDARG00000102411	CR847850.1	98	59.910	ENSDARG00000102401	znf1001	100	61.022
ENSDARG00000102411	CR847850.1	95	58.258	ENSDARG00000099172	BX000701.1	93	60.064
ENSDARG00000102411	CR847850.1	94	46.367	ENSDARG00000071589	si:dkey-253d23.2	97	42.222
ENSDARG00000102411	CR847850.1	95	50.000	ENSDARG00000116814	CU570894.2	99	50.000
ENSDARG00000102411	CR847850.1	99	56.842	ENSDARG00000106565	CABZ01066720.1	96	57.544
ENSDARG00000102411	CR847850.1	96	52.698	ENSDARG00000094736	znf1157	84	55.369
ENSDARG00000102411	CR847850.1	98	56.118	ENSDARG00000100361	znf1174	75	56.118
ENSDARG00000102411	CR847850.1	92	65.744	ENSDARG00000103777	znf1001	99	69.531
ENSDARG00000102411	CR847850.1	95	66.366	ENSDARG00000098248	CABZ01081730.1	97	68.354
ENSDARG00000102411	CR847850.1	92	48.561	ENSDARG00000099986	si:ch211-207i20.2	62	48.561
ENSDARG00000102411	CR847850.1	92	61.745	ENSDARG00000100587	zgc:113886	92	56.849
ENSDARG00000102411	CR847850.1	96	58.521	ENSDARG00000103530	zgc:113102	96	58.842
ENSDARG00000102411	CR847850.1	94	60.968	ENSDARG00000097521	si:dkey-111k8.5	89	61.724
ENSDARG00000102411	CR847850.1	92	64.398	ENSDARG00000069869	zgc:113030	98	64.398
ENSDARG00000102411	CR847850.1	95	50.000	ENSDARG00000078281	zgc:173575	98	50.000
ENSDARG00000102411	CR847850.1	94	44.196	ENSDARG00000104807	si:ch73-221f6.3	65	44.156
ENSDARG00000102411	CR847850.1	88	60.976	ENSDARG00000088051	AL935044.1	99	60.976
ENSDARG00000102411	CR847850.1	95	57.100	ENSDARG00000113011	zgc:113102	95	59.744
ENSDARG00000102411	CR847850.1	92	61.745	ENSDARG00000093378	si:ch211-235i11.5	86	61.745
ENSDARG00000102411	CR847850.1	95	58.238	ENSDARG00000098021	si:dkey-111k8.2	87	57.308
ENSDARG00000102411	CR847850.1	91	61.386	ENSDARG00000111899	zgc:171435	70	61.386
ENSDARG00000102411	CR847850.1	99	66.766	ENSDARG00000100803	zgc:173517	99	69.304
ENSDARG00000102411	CR847850.1	94	46.122	ENSDARG00000078159	zgc:175284	88	47.343
ENSDARG00000102411	CR847850.1	94	58.590	ENSDARG00000078814	si:dkey-34m19.3	78	58.590
ENSDARG00000102411	CR847850.1	87	59.716	ENSDARG00000101044	si:ch73-138e16.6	92	59.716
ENSDARG00000102411	CR847850.1	96	46.352	ENSDARG00000102282	CABZ01063298.1	88	46.352
ENSDARG00000102411	CR847850.1	98	59.910	ENSDARG00000115857	znf1001	100	61.342
ENSDARG00000102411	CR847850.1	96	58.842	ENSDARG00000098923	zgc:173577	96	59.486
ENSDARG00000102411	CR847850.1	96	50.192	ENSDARG00000103954	znf1152	94	50.192
ENSDARG00000102411	CR847850.1	93	66.518	ENSDARG00000099917	znf1005	99	66.518
ENSDARG00000102411	CR847850.1	93	63.707	ENSDARG00000109703	FO834825.1	81	63.707
ENSDARG00000102411	CR847850.1	92	50.000	ENSDARG00000104798	BX510922.2	87	50.000
ENSDARG00000102411	CR847850.1	93	48.969	ENSDARG00000098898	si:ch211-255f4.2	99	48.969
ENSDARG00000102411	CR847850.1	87	47.910	ENSDARG00000104065	znf1154	87	48.929
ENSDARG00000102411	CR847850.1	94	48.601	ENSDARG00000071790	znf1153	78	48.601
ENSDARG00000102411	CR847850.1	95	53.731	ENSDARG00000088507	znf982	98	65.323
ENSDARG00000102411	CR847850.1	95	66.904	ENSDARG00000077712	zgc:113886	99	69.084
ENSDARG00000102411	CR847850.1	96	46.352	ENSDARG00000079760	zgc:112998	85	46.352

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000102411	CR847850.1	93	45.985	ENSACLG00000020260	-	99	45.985	Astatotilapia_calliptera
ENSDARG00000102411	CR847850.1	92	44.086	ENSEBUG00000001219	-	85	44.221	Eptatretus_burgeri
ENSDARG00000102411	CR847850.1	91	47.325	ENSEBUG00000013528	-	78	46.980	Eptatretus_burgeri
ENSDARG00000102411	CR847850.1	92	47.664	ENSFHEG00000013173	-	52	47.664	Fundulus_heteroclitus
ENSDARG00000102411	CR847850.1	95	46.429	ENSHBUG00000022063	-	74	46.429	Haplochromis_burtoni
ENSDARG00000102411	CR847850.1	89	44.954	ENSKMAG00000018636	-	80	40.637	Kryptolebias_marmoratus
ENSDARG00000102411	CR847850.1	95	44.304	ENSLBEG00000004833	-	70	44.304	Labrus_bergylta
ENSDARG00000102411	CR847850.1	92	45.486	ENSLOCG00000004661	-	99	45.486	Lepisosteus_oculatus
ENSDARG00000102411	CR847850.1	91	45.736	ENSMZEG00005010500	-	70	46.154	Maylandia_zebra
ENSDARG00000102411	CR847850.1	96	45.775	ENSMZEG00005010521	-	93	43.114	Maylandia_zebra
ENSDARG00000102411	CR847850.1	92	41.860	ENSNBRG00000024086	-	57	41.860	Neolamprologus_brichardi
ENSDARG00000102411	CR847850.1	91	45.933	ENSONIG00000018036	-	100	46.897	Oreochromis_niloticus
ENSDARG00000102411	CR847850.1	95	49.541	ENSPKIG00000002670	-	61	49.541	Paramormyrops_kingsleyae
ENSDARG00000102411	CR847850.1	89	43.046	ENSPMAG00000000706	-	100	43.046	Petromyzon_marinus
ENSDARG00000102411	CR847850.1	88	48.387	ENSPMEG00000023840	-	100	48.387	Poecilia_mexicana
ENSDARG00000102411	CR847850.1	97	47.926	ENSPMEG00000022786	si:dkey-77f5.14	74	47.926	Poecilia_mexicana
ENSDARG00000102411	CR847850.1	92	47.458	ENSPMEG00000020827	-	95	47.458	Poecilia_mexicana
ENSDARG00000102411	CR847850.1	92	46.823	ENSSFOG00015009678	-	58	48.239	Scleropages_formosus