EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000102450 (Gene tree)
Gene ID: 101883902
Gene Symbol: CU571328.1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 2635 bases
Position: chr3:57820913-57823547
Accession: 101883902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000140799	RRM_1	PF00076.22	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000168101	CU571328.1-201	856	XM_005171653	ENSDARP00000140799	127 (aa)	XP_005171710	A0A0G2L7P5

Gene Model

Click here to download ENSDARG00000102450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000102450's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000102450	CU571328.1	67	31.395	ENSDARG00000007960	hnrnpaba	53	31.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000102450	CU571328.1	79	35.644	ENSACIG00000013907	-	92	34.653	Amphilophus_citrinellus
ENSDARG00000102450	CU571328.1	80	34.615	ENSAOCG00000013396	-	76	34.615	Amphiprion_ocellaris
ENSDARG00000102450	CU571328.1	77	35.644	ENSAPEG00000003539	-	75	35.644	Amphiprion_percula
ENSDARG00000102450	CU571328.1	81	32.692	ENSATEG00000024207	-	83	32.692	Anabas_testudineus
ENSDARG00000102450	CU571328.1	80	34.314	ENSACLG00000025617	-	67	34.314	Astatotilapia_calliptera
ENSDARG00000102450	CU571328.1	77	35.354	ENSCVAG00000011461	-	82	35.354	Cyprinodon_variegatus
ENSDARG00000102450	CU571328.1	83	35.185	ENSELUG00000014190	RO21	90	35.185	Esox_lucius
ENSDARG00000102450	CU571328.1	64	35.802	ENSGMOG00000000626	-	72	35.802	Gadus_morhua
ENSDARG00000102450	CU571328.1	80	34.314	ENSHBUG00000002750	-	67	34.314	Haplochromis_burtoni
ENSDARG00000102450	CU571328.1	81	34.615	ENSLBEG00000023432	-	88	33.654	Labrus_bergylta
ENSDARG00000102450	CU571328.1	80	34.314	ENSMZEG00005013064	-	67	34.314	Maylandia_zebra
ENSDARG00000102450	CU571328.1	77	36.364	ENSMMOG00000010899	-	80	36.364	Mola_mola
ENSDARG00000102450	CU571328.1	62	37.975	ENSNBRG00000023103	-	55	37.975	Neolamprologus_brichardi
ENSDARG00000102450	CU571328.1	64	38.272	ENSONIG00000005302	-	63	38.272	Oreochromis_niloticus
ENSDARG00000102450	CU571328.1	80	30.392	ENSOMEG00000008826	-	63	30.392	Oryzias_melastigma
ENSDARG00000102450	CU571328.1	83	31.776	ENSPMGG00000003488	-	92	31.776	Periophthalmus_magnuspinnatus
ENSDARG00000102450	CU571328.1	81	33.654	ENSPNYG00000019872	-	70	33.654	Pundamilia_nyererei
ENSDARG00000102450	CU571328.1	80	37.255	ENSSMAG00000017418	-	76	37.255	Scophthalmus_maximus
ENSDARG00000102450	CU571328.1	80	34.314	ENSSDUG00000011905	-	72	34.314	Seriola_dumerili
ENSDARG00000102450	CU571328.1	81	35.577	ENSSLDG00000021809	-	69	35.577	Seriola_lalandi_dorsalis
ENSDARG00000102450	CU571328.1	83	35.849	ENSSPAG00000004304	-	98	35.849	Stegastes_partitus
ENSDARG00000102450	CU571328.1	80	33.333	ENSTRUG00000023389	-	87	33.333	Takifugu_rubripes