EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000102569 (Gene tree)
Gene ID: 572258
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: polymerase (RNA) III (DNA directed) polypeptide A
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 68344 bases
Position: chr12:47794089-47862432
Accession: ZDB-GENE-050208-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000139214	RNA_pol_Rpb1_5	PF04998.17	1.3e-87	1	1
ENSDARP00000139214	RNA_pol_Rpb1_4	PF05000.17	8.8e-32	1	1
ENSDARP00000139214	RNA_pol_Rpb1_2	PF00623.20	1.2e-73	1	1
ENSDARP00000139214	RNA_pol_Rpb1_3	PF04983.18	1.7e-41	1	1
ENSDARP00000139214	RNA_pol_Rpb1_1	PF04997.12	4.1e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000160726	-	5493	XM_021480157	ENSDARP00000139214	1390 (aa)	XP_021335832	A0A0R4IV41

Gene Model

Click here to download ENSDARG00000102569's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03020	RNA polymerase	KEGG
dre04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000102569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000102569	polr3a	69	62.687	ENSDARG00000098375	polr1a	59	62.687
ENSDARG00000102569	polr3a	91	38.284	ENSDARG00000099966	polr2a	66	38.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000102569	polr3a	99	90.274	ENSG00000148606	POLR3A	99	90.274	Homo_sapiens
ENSDARG00000102569	polr3a	62	89.547	ENSAPOG00000022727	polr3a	99	89.547	Acanthochromis_polyacanthus
ENSDARG00000102569	polr3a	99	89.799	ENSAMEG00000017801	POLR3A	99	89.799	Ailuropoda_melanoleuca
ENSDARG00000102569	polr3a	94	92.769	ENSACIG00000024504	polr3a	97	92.769	Amphilophus_citrinellus
ENSDARG00000102569	polr3a	99	88.473	ENSAOCG00000003949	-	99	88.473	Amphiprion_ocellaris
ENSDARG00000102569	polr3a	99	91.859	ENSAOCG00000002071	polr3a	99	91.859	Amphiprion_ocellaris
ENSDARG00000102569	polr3a	99	91.715	ENSAPEG00000001966	-	99	91.715	Amphiprion_percula
ENSDARG00000102569	polr3a	99	91.859	ENSAPEG00000013351	polr3a	99	91.859	Amphiprion_percula
ENSDARG00000102569	polr3a	99	91.931	ENSATEG00000023277	polr3a	99	91.931	Anabas_testudineus
ENSDARG00000102569	polr3a	99	91.042	ENSAPLG00000015878	POLR3A	99	91.042	Anas_platyrhynchos
ENSDARG00000102569	polr3a	93	90.069	ENSACAG00000007985	POLR3A	99	90.069	Anolis_carolinensis
ENSDARG00000102569	polr3a	99	87.554	ENSANAG00000028922	POLR3A	96	91.720	Aotus_nancymaae
ENSDARG00000102569	polr3a	99	91.931	ENSACLG00000005914	polr3a	99	91.931	Astatotilapia_calliptera
ENSDARG00000102569	polr3a	99	89.705	ENSAMXG00000018852	polr3a	99	89.705	Astyanax_mexicanus
ENSDARG00000102569	polr3a	99	90.202	ENSBTAG00000013259	POLR3A	99	90.202	Bos_taurus
ENSDARG00000102569	polr3a	99	56.590	WBGene00004411	rpc-1	99	56.590	Caenorhabditis_elegans
ENSDARG00000102569	polr3a	99	90.274	ENSCJAG00000001015	POLR3A	99	90.274	Callithrix_jacchus
ENSDARG00000102569	polr3a	99	89.921	ENSCAFG00000015546	POLR3A	99	89.921	Canis_familiaris
ENSDARG00000102569	polr3a	99	89.921	ENSCAFG00020014711	POLR3A	99	89.921	Canis_lupus_dingo
ENSDARG00000102569	polr3a	99	89.769	ENSCHIG00000000352	POLR3A	99	89.769	Capra_hircus
ENSDARG00000102569	polr3a	99	89.633	ENSTSYG00000006671	POLR3A	99	89.633	Carlito_syrichta
ENSDARG00000102569	polr3a	99	90.095	ENSCAPG00000016031	POLR3A	99	90.095	Cavia_aperea
ENSDARG00000102569	polr3a	99	90.202	ENSCPOG00000022387	POLR3A	99	90.202	Cavia_porcellus
ENSDARG00000102569	polr3a	99	88.913	ENSCCAG00000032995	POLR3A	99	88.913	Cebus_capucinus
ENSDARG00000102569	polr3a	99	90.065	ENSCATG00000035842	POLR3A	98	91.139	Cercocebus_atys
ENSDARG00000102569	polr3a	99	90.202	ENSCLAG00000009629	POLR3A	99	90.202	Chinchilla_lanigera
ENSDARG00000102569	polr3a	99	90.274	ENSCSAG00000009292	POLR3A	99	90.274	Chlorocebus_sabaeus
ENSDARG00000102569	polr3a	81	81.926	ENSCHOG00000008368	POLR3A	95	81.926	Choloepus_hoffmanni
ENSDARG00000102569	polr3a	99	90.418	ENSCPBG00000002079	POLR3A	99	90.418	Chrysemys_picta_bellii
ENSDARG00000102569	polr3a	99	68.516	ENSCSAVG00000009925	-	99	68.516	Ciona_savignyi
ENSDARG00000102569	polr3a	86	85.915	ENSCANG00000041071	POLR3A	98	90.506	Colobus_angolensis_palliatus
ENSDARG00000102569	polr3a	78	91.389	ENSCGRG00001015599	-	92	91.389	Cricetulus_griseus_chok1gshd
ENSDARG00000102569	polr3a	89	89.932	ENSCGRG00000001019	Polr3a	100	89.932	Cricetulus_griseus_crigri
ENSDARG00000102569	polr3a	99	91.715	ENSCSEG00000016653	polr3a	99	91.715	Cynoglossus_semilaevis
ENSDARG00000102569	polr3a	99	91.427	ENSCVAG00000023049	polr3a	99	91.427	Cyprinodon_variegatus
ENSDARG00000102569	polr3a	99	89.633	ENSDNOG00000010194	POLR3A	99	89.633	Dasypus_novemcinctus
ENSDARG00000102569	polr3a	99	90.137	ENSDORG00000000184	Polr3a	99	90.137	Dipodomys_ordii
ENSDARG00000102569	polr3a	99	56.606	FBgn0030687	CG17209	99	56.606	Drosophila_melanogaster
ENSDARG00000102569	polr3a	87	89.388	ENSETEG00000007477	POLR3A	88	89.388	Echinops_telfairi
ENSDARG00000102569	polr3a	59	76.581	ENSEBUG00000013761	polr3a	98	76.581	Eptatretus_burgeri
ENSDARG00000102569	polr3a	99	90.353	ENSEASG00005023053	POLR3A	99	90.353	Equus_asinus_asinus
ENSDARG00000102569	polr3a	97	90.686	ENSECAG00000019416	POLR3A	99	90.686	Equus_caballus
ENSDARG00000102569	polr3a	96	85.906	ENSEEUG00000001774	POLR3A	100	85.906	Erinaceus_europaeus
ENSDARG00000102569	polr3a	99	90.151	ENSELUG00000014016	polr3a	99	90.151	Esox_lucius
ENSDARG00000102569	polr3a	99	90.137	ENSFCAG00000000843	POLR3A	99	90.137	Felis_catus
ENSDARG00000102569	polr3a	99	90.504	ENSFALG00000006913	POLR3A	99	90.504	Ficedula_albicollis
ENSDARG00000102569	polr3a	99	90.202	ENSFDAG00000007813	POLR3A	99	90.202	Fukomys_damarensis
ENSDARG00000102569	polr3a	94	91.557	ENSFHEG00000011922	polr3a	99	91.557	Fundulus_heteroclitus
ENSDARG00000102569	polr3a	99	86.038	ENSGMOG00000000291	polr3a	99	86.038	Gadus_morhua
ENSDARG00000102569	polr3a	99	90.857	ENSGALG00000004947	POLR3A	99	90.857	Gallus_gallus
ENSDARG00000102569	polr3a	99	91.643	ENSGAFG00000005112	polr3a	99	91.643	Gambusia_affinis
ENSDARG00000102569	polr3a	99	91.282	ENSGACG00000002304	polr3a	99	91.282	Gasterosteus_aculeatus
ENSDARG00000102569	polr3a	95	90.537	ENSGAGG00000010386	POLR3A	98	90.537	Gopherus_agassizii
ENSDARG00000102569	polr3a	99	89.154	ENSGGOG00000027729	POLR3A	99	91.304	Gorilla_gorilla
ENSDARG00000102569	polr3a	99	91.931	ENSHBUG00000018098	polr3a	99	91.931	Haplochromis_burtoni
ENSDARG00000102569	polr3a	99	90.130	ENSHGLG00000017899	POLR3A	99	90.130	Heterocephalus_glaber_female
ENSDARG00000102569	polr3a	99	90.130	ENSHGLG00100008483	POLR3A	99	90.130	Heterocephalus_glaber_male
ENSDARG00000102569	polr3a	99	90.713	ENSHCOG00000001075	polr3a	99	90.713	Hippocampus_comes
ENSDARG00000102569	polr3a	99	90.137	ENSSTOG00000012983	POLR3A	99	90.137	Ictidomys_tridecemlineatus
ENSDARG00000102569	polr3a	99	92.075	ENSKMAG00000015290	polr3a	99	92.075	Kryptolebias_marmoratus
ENSDARG00000102569	polr3a	99	90.490	ENSLBEG00000017214	polr3a	99	90.490	Labrus_bergylta
ENSDARG00000102569	polr3a	97	87.881	ENSLACG00000018557	POLR3A	99	87.881	Latimeria_chalumnae
ENSDARG00000102569	polr3a	99	91.876	ENSLOCG00000004942	polr3a	99	91.876	Lepisosteus_oculatus
ENSDARG00000102569	polr3a	99	88.921	ENSLAFG00000016719	POLR3A	99	88.921	Loxodonta_africana
ENSDARG00000102569	polr3a	99	90.137	ENSMFAG00000032218	POLR3A	99	90.137	Macaca_fascicularis
ENSDARG00000102569	polr3a	99	90.137	ENSMMUG00000005514	POLR3A	98	91.139	Macaca_mulatta
ENSDARG00000102569	polr3a	99	83.691	ENSMNEG00000035163	POLR3A	99	90.302	Macaca_nemestrina
ENSDARG00000102569	polr3a	99	86.269	ENSMLEG00000030014	POLR3A	98	91.139	Mandrillus_leucophaeus
ENSDARG00000102569	polr3a	99	91.931	ENSMAMG00000017497	polr3a	99	91.931	Mastacembelus_armatus
ENSDARG00000102569	polr3a	99	91.931	ENSMZEG00005000576	polr3a	99	91.931	Maylandia_zebra
ENSDARG00000102569	polr3a	99	73.134	ENSMGAG00000005713	-	99	73.134	Meleagris_gallopavo
ENSDARG00000102569	polr3a	99	88.049	ENSMAUG00000016247	Polr3a	99	88.049	Mesocricetus_auratus
ENSDARG00000102569	polr3a	99	90.137	ENSMICG00000005937	POLR3A	99	91.297	Microcebus_murinus
ENSDARG00000102569	polr3a	99	90.353	ENSMOCG00000012185	Polr3a	99	90.353	Microtus_ochrogaster
ENSDARG00000102569	polr3a	99	90.778	ENSMMOG00000013822	polr3a	99	90.778	Mola_mola
ENSDARG00000102569	polr3a	99	90.137	ENSMODG00000001036	POLR3A	99	90.137	Monodelphis_domestica
ENSDARG00000102569	polr3a	99	90.922	ENSMALG00000001249	polr3a	99	90.922	Monopterus_albus
ENSDARG00000102569	polr3a	99	90.425	MGP_CAROLIEiJ_G0019016	Polr3a	99	90.425	Mus_caroli
ENSDARG00000102569	polr3a	99	90.425	ENSMUSG00000025280	Polr3a	99	90.425	Mus_musculus
ENSDARG00000102569	polr3a	99	90.353	MGP_PahariEiJ_G0030029	Polr3a	99	90.353	Mus_pahari
ENSDARG00000102569	polr3a	99	87.896	MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	Mus_spretus
ENSDARG00000102569	polr3a	99	89.365	ENSMPUG00000003790	POLR3A	99	89.365	Mustela_putorius_furo
ENSDARG00000102569	polr3a	99	88.985	ENSMLUG00000011522	POLR3A	99	88.985	Myotis_lucifugus
ENSDARG00000102569	polr3a	99	88.625	ENSNGAG00000015863	Polr3a	99	88.625	Nannospalax_galili
ENSDARG00000102569	polr3a	99	90.490	ENSNBRG00000014262	polr3a	99	90.490	Neolamprologus_brichardi
ENSDARG00000102569	polr3a	88	84.121	ENSNLEG00000010501	POLR3A	92	84.121	Nomascus_leucogenys
ENSDARG00000102569	polr3a	99	77.511	ENSMEUG00000012446	POLR3A	99	77.511	Notamacropus_eugenii
ENSDARG00000102569	polr3a	99	85.529	ENSOPRG00000001880	-	99	85.529	Ochotona_princeps
ENSDARG00000102569	polr3a	99	89.841	ENSODEG00000015146	POLR3A	99	89.841	Octodon_degus
ENSDARG00000102569	polr3a	99	92.291	ENSONIG00000016129	polr3a	99	92.291	Oreochromis_niloticus
ENSDARG00000102569	polr3a	98	89.693	ENSOANG00000007013	POLR3A	99	89.693	Ornithorhynchus_anatinus
ENSDARG00000102569	polr3a	99	90.202	ENSOCUG00000012450	POLR3A	99	90.202	Oryctolagus_cuniculus
ENSDARG00000102569	polr3a	99	91.643	ENSORLG00000008958	polr3a	99	91.643	Oryzias_latipes
ENSDARG00000102569	polr3a	97	92.250	ENSORLG00020007525	polr3a	98	92.250	Oryzias_latipes_hni
ENSDARG00000102569	polr3a	99	91.715	ENSORLG00015006633	polr3a	99	91.715	Oryzias_latipes_hsok
ENSDARG00000102569	polr3a	99	91.282	ENSOMEG00000012865	polr3a	99	91.282	Oryzias_melastigma
ENSDARG00000102569	polr3a	99	89.921	ENSOGAG00000010995	POLR3A	99	89.921	Otolemur_garnettii
ENSDARG00000102569	polr3a	99	89.784	ENSOARG00000009656	POLR3A	99	89.784	Ovis_aries
ENSDARG00000102569	polr3a	99	90.137	ENSPPRG00000002128	POLR3A	99	90.137	Panthera_pardus
ENSDARG00000102569	polr3a	99	90.137	ENSPTIG00000020916	POLR3A	99	90.137	Panthera_tigris_altaica
ENSDARG00000102569	polr3a	99	90.202	ENSPTRG00000002664	POLR3A	99	90.202	Pan_troglodytes
ENSDARG00000102569	polr3a	99	90.065	ENSPANG00000022508	POLR3A	98	91.139	Papio_anubis
ENSDARG00000102569	polr3a	99	92.867	ENSPKIG00000008140	polr3a	99	93.725	Paramormyrops_kingsleyae
ENSDARG00000102569	polr3a	98	90.344	ENSPSIG00000002092	POLR3A	99	90.344	Pelodiscus_sinensis
ENSDARG00000102569	polr3a	99	90.209	ENSPEMG00000006768	Polr3a	99	90.209	Peromyscus_maniculatus_bairdii
ENSDARG00000102569	polr3a	99	89.993	ENSPCIG00000015842	POLR3A	99	89.993	Phascolarctos_cinereus
ENSDARG00000102569	polr3a	53	91.790	ENSPFOG00000006458	polr3a	99	91.790	Poecilia_formosa
ENSDARG00000102569	polr3a	99	91.715	ENSPLAG00000000997	polr3a	99	91.715	Poecilia_latipinna
ENSDARG00000102569	polr3a	99	91.643	ENSPMEG00000006821	polr3a	99	91.643	Poecilia_mexicana
ENSDARG00000102569	polr3a	99	91.787	ENSPREG00000002385	polr3a	99	91.787	Poecilia_reticulata
ENSDARG00000102569	polr3a	93	90.078	ENSPPYG00000002305	POLR3A	99	90.078	Pongo_abelii
ENSDARG00000102569	polr3a	84	79.771	ENSPCAG00000005690	POLR3A	87	79.771	Procavia_capensis
ENSDARG00000102569	polr3a	99	89.921	ENSPCOG00000028311	POLR3A	99	89.921	Propithecus_coquereli
ENSDARG00000102569	polr3a	99	88.769	ENSPVAG00000015553	POLR3A	99	88.769	Pteropus_vampyrus
ENSDARG00000102569	polr3a	99	91.859	ENSPNYG00000020987	polr3a	99	91.859	Pundamilia_nyererei
ENSDARG00000102569	polr3a	100	88.561	ENSPNAG00000006629	polr3a	100	88.561	Pygocentrus_nattereri
ENSDARG00000102569	polr3a	99	90.209	ENSRNOG00000010008	Polr3a	99	90.209	Rattus_norvegicus
ENSDARG00000102569	polr3a	99	86.527	ENSRBIG00000034967	POLR3A	98	91.139	Rhinopithecus_bieti
ENSDARG00000102569	polr3a	99	90.202	ENSRROG00000025527	POLR3A	99	90.202	Rhinopithecus_roxellana
ENSDARG00000102569	polr3a	99	50.414	YOR116C	RPO31	99	50.414	Saccharomyces_cerevisiae
ENSDARG00000102569	polr3a	99	90.346	ENSSBOG00000022199	POLR3A	99	90.346	Saimiri_boliviensis_boliviensis
ENSDARG00000102569	polr3a	99	89.986	ENSSHAG00000007588	POLR3A	94	89.986	Sarcophilus_harrisii
ENSDARG00000102569	polr3a	99	92.939	ENSSFOG00015014357	polr3a	99	92.939	Scleropages_formosus
ENSDARG00000102569	polr3a	99	91.859	ENSSMAG00000001780	polr3a	99	91.859	Scophthalmus_maximus
ENSDARG00000102569	polr3a	99	92.219	ENSSDUG00000019840	polr3a	99	92.219	Seriola_dumerili
ENSDARG00000102569	polr3a	99	92.147	ENSSLDG00000023908	polr3a	99	92.147	Seriola_lalandi_dorsalis
ENSDARG00000102569	polr3a	69	92.163	ENSSARG00000009916	POLR3A	89	92.163	Sorex_araneus
ENSDARG00000102569	polr3a	99	88.545	ENSSPUG00000013209	POLR3A	99	88.545	Sphenodon_punctatus
ENSDARG00000102569	polr3a	99	92.219	ENSSPAG00000017712	polr3a	99	92.219	Stegastes_partitus
ENSDARG00000102569	polr3a	99	90.137	ENSSSCG00000010327	POLR3A	99	90.199	Sus_scrofa
ENSDARG00000102569	polr3a	99	90.785	ENSTGUG00000006423	-	99	90.785	Taeniopygia_guttata
ENSDARG00000102569	polr3a	99	91.354	ENSTRUG00000013488	polr3a	99	91.354	Takifugu_rubripes
ENSDARG00000102569	polr3a	99	91.079	ENSTNIG00000013151	polr3a	99	91.079	Tetraodon_nigroviridis
ENSDARG00000102569	polr3a	71	92.553	ENSTBEG00000015288	POLR3A	75	92.553	Tupaia_belangeri
ENSDARG00000102569	polr3a	96	89.884	ENSTTRG00000007817	POLR3A	99	89.884	Tursiops_truncatus
ENSDARG00000102569	polr3a	99	87.617	ENSUAMG00000011283	POLR3A	99	87.617	Ursus_americanus
ENSDARG00000102569	polr3a	99	89.993	ENSUMAG00000013913	POLR3A	99	89.993	Ursus_maritimus
ENSDARG00000102569	polr3a	99	82.169	ENSVPAG00000003285	POLR3A	99	82.169	Vicugna_pacos
ENSDARG00000102569	polr3a	99	89.921	ENSVVUG00000025523	POLR3A	99	89.921	Vulpes_vulpes
ENSDARG00000102569	polr3a	86	89.724	ENSXETG00000018101	polr3a	100	89.724	Xenopus_tropicalis
ENSDARG00000102569	polr3a	99	91.859	ENSXMAG00000015213	polr3a	99	92.192	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001056	RNA polymerase III activity	21873635.	IBA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	21873635.	IBA	Function
GO:0003899	DNA-directed 5'-3' RNA polymerase activity	-	IEA	Function
GO:0005666	RNA polymerase III complex	21873635.	IBA	Component
GO:0006351	transcription, DNA-templated	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0016779	nucleotidyltransferase activity	-	IEA	Function