EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000102636 (Gene tree)
Gene ID: 326652
Gene Symbol: trmt9b
Alias: wu:fe01e11|zgc:73340
Full Name: tRNA methyltransferase 9B
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 31195 bases
Position: chr15:33702918-33734112
Accession: ZDB-GENE-030131-4851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000138100	Methyltransf_31	PF13847.6	1.7e-06	1	1
ENSDARP00000138100	Methyltransf_8	PF05148.15	7.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000172045	-	2565	-	ENSDARP00000138100	412 (aa)	-	A0A0R4IST8
ENSDART00000172729	-	733	-	ENSDARP00000138241	121 (aa)	-	A0A0R4IVE8
ENSDART00000158430	-	369	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000102636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000102636's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000102636	trmt9b	100	62.443	ENSAPOG00000021388	trmt9b	99	63.279	Acanthochromis_polyacanthus
ENSDARG00000102636	trmt9b	100	64.455	ENSACIG00000004292	trmt9b	100	63.270	Amphilophus_citrinellus
ENSDARG00000102636	trmt9b	100	62.980	ENSAOCG00000009292	trmt9b	99	63.889	Amphiprion_ocellaris
ENSDARG00000102636	trmt9b	100	62.980	ENSAPEG00000009854	trmt9b	99	63.889	Amphiprion_percula
ENSDARG00000102636	trmt9b	100	64.434	ENSATEG00000012676	trmt9b	100	64.896	Anabas_testudineus
ENSDARG00000102636	trmt9b	100	65.105	ENSACLG00000000314	trmt9b	100	63.934	Astatotilapia_calliptera
ENSDARG00000102636	trmt9b	100	61.312	ENSELUG00000001357	trmt9b	100	61.224	Esox_lucius
ENSDARG00000102636	trmt9b	100	61.290	ENSFHEG00000011480	trmt9b	99	60.829	Fundulus_heteroclitus
ENSDARG00000102636	trmt9b	100	57.971	ENSGMOG00000004443	trmt9b	100	58.454	Gadus_morhua
ENSDARG00000102636	trmt9b	100	61.176	ENSGACG00000011506	trmt9b	92	76.000	Gasterosteus_aculeatus
ENSDARG00000102636	trmt9b	100	65.808	ENSHBUG00000002295	trmt9b	99	64.637	Haplochromis_burtoni
ENSDARG00000102636	trmt9b	100	69.626	ENSIPUG00000013917	kiaa1456	100	69.393	Ictalurus_punctatus
ENSDARG00000102636	trmt9b	100	61.991	ENSKMAG00000007640	trmt9b	99	61.538	Kryptolebias_marmoratus
ENSDARG00000102636	trmt9b	100	64.501	ENSLBEG00000002263	trmt9b	99	64.733	Labrus_bergylta
ENSDARG00000102636	trmt9b	100	50.801	ENSLACG00000008143	trmt9b	100	51.636	Latimeria_chalumnae
ENSDARG00000102636	trmt9b	100	57.727	ENSLOCG00000008334	trmt9b	100	57.500	Lepisosteus_oculatus
ENSDARG00000102636	trmt9b	100	63.488	ENSMAMG00000010689	trmt9b	99	63.488	Mastacembelus_armatus
ENSDARG00000102636	trmt9b	100	65.574	ENSMZEG00005011387	trmt9b	99	64.403	Maylandia_zebra
ENSDARG00000102636	trmt9b	100	60.046	ENSMMOG00000015857	trmt9b	99	60.046	Mola_mola
ENSDARG00000102636	trmt9b	100	66.276	ENSONIG00000005528	trmt9b	100	65.105	Oreochromis_niloticus
ENSDARG00000102636	trmt9b	100	62.441	ENSORLG00000003826	trmt9b	99	61.972	Oryzias_latipes
ENSDARG00000102636	trmt9b	100	61.502	ENSORLG00020012656	trmt9b	99	61.033	Oryzias_latipes_hni
ENSDARG00000102636	trmt9b	100	61.033	ENSORLG00015016783	trmt9b	99	60.563	Oryzias_latipes_hsok
ENSDARG00000102636	trmt9b	99	61.758	ENSOMEG00000002455	trmt9b	100	61.283	Oryzias_melastigma
ENSDARG00000102636	trmt9b	100	63.073	ENSPFOG00000001551	trmt9b	99	62.615	Poecilia_formosa
ENSDARG00000102636	trmt9b	100	63.073	ENSPLAG00000014962	trmt9b	99	62.615	Poecilia_latipinna
ENSDARG00000102636	trmt9b	100	63.073	ENSPMEG00000001760	trmt9b	99	62.615	Poecilia_mexicana
ENSDARG00000102636	trmt9b	100	64.235	ENSPREG00000012608	trmt9b	100	63.765	Poecilia_reticulata
ENSDARG00000102636	trmt9b	100	65.808	ENSPNYG00000011729	trmt9b	100	64.637	Pundamilia_nyererei
ENSDARG00000102636	trmt9b	100	71.259	ENSPNAG00000008215	trmt9b	100	71.259	Pygocentrus_nattereri
ENSDARG00000102636	trmt9b	100	62.212	ENSSMAG00000006457	trmt9b	99	61.468	Scophthalmus_maximus
ENSDARG00000102636	trmt9b	100	63.844	ENSSDUG00000011364	trmt9b	99	64.073	Seriola_dumerili
ENSDARG00000102636	trmt9b	100	65.258	ENSSLDG00000005317	trmt9b	100	65.493	Seriola_lalandi_dorsalis
ENSDARG00000102636	trmt9b	100	63.825	ENSSPAG00000013471	trmt9b	100	63.594	Stegastes_partitus
ENSDARG00000102636	trmt9b	100	63.048	ENSTRUG00000006224	trmt9b	99	62.818	Takifugu_rubripes
ENSDARG00000102636	trmt9b	99	62.830	ENSTNIG00000016262	trmt9b	99	64.320	Tetraodon_nigroviridis
ENSDARG00000102636	trmt9b	100	44.988	ENSXETG00000016909	trmt9b	100	44.366	Xenopus_tropicalis
ENSDARG00000102636	trmt9b	100	64.471	ENSXCOG00000005471	trmt9b	100	64.000	Xiphophorus_couchianus
ENSDARG00000102636	trmt9b	100	63.073	ENSXMAG00000006981	trmt9b	99	62.615	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	21873635.	IBA	Function
GO:0002098	tRNA wobble uridine modification	21873635.	IBA	Process
GO:0002098	tRNA wobble uridine modification	-	IEA	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0016300	tRNA (uracil) methyltransferase activity	21873635.	IBA	Function
GO:0016300	tRNA (uracil) methyltransferase activity	-	IEA	Function
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	21873635.	IBA	Function