EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000102837 (Gene tree)
Gene ID: -
Gene Symbol: znf1145
Alias: si:ch211-142b24.3
Full Name: zinc finger protein 1145
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 6598 bases
Position: chr4:42009286-42015883
Accession: ZDB-GENE-141212-288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000139200	zf-C2H2	PF00096.26	3.8e-25	1	4
ENSDARP00000139200	zf-C2H2	PF00096.26	3.8e-25	2	4
ENSDARP00000139200	zf-C2H2	PF00096.26	3.8e-25	3	4
ENSDARP00000139200	zf-C2H2	PF00096.26	3.8e-25	4	4
ENSDARP00000139200	zf-met	PF12874.7	0.00048	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000163399	-	820	XM_017355598	ENSDARP00000139200	200 (aa)	XP_017211087	A0A0H2UK28

Gene Model

Click here to download ENSDARG00000102837's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000102837's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000102837	znf1145	100	62.054	ENSDARG00000102561	AL645691.1	97	61.161
ENSDARG00000102837	znf1145	100	67.500	ENSDARG00000111550	CABZ01002702.1	98	67.500
ENSDARG00000102837	znf1145	100	88.000	ENSDARG00000105067	znf1043	99	88.000
ENSDARG00000102837	znf1145	100	93.500	ENSDARG00000096210	znf1050	99	93.500
ENSDARG00000102837	znf1145	100	51.667	ENSDARG00000105692	CABZ01069022.1	92	49.772
ENSDARG00000102837	znf1145	100	51.923	ENSDARG00000087453	si:ch73-57f22.2	88	51.923
ENSDARG00000102837	znf1145	100	88.500	ENSDARG00000089814	znf1042	100	88.500
ENSDARG00000102837	znf1145	100	88.000	ENSDARG00000116216	znf1046	99	88.000
ENSDARG00000102837	znf1145	100	88.500	ENSDARG00000091994	znf1048	99	88.500
ENSDARG00000102837	znf1145	100	72.500	ENSDARG00000098087	si:dkey-30f3.2	99	72.500
ENSDARG00000102837	znf1145	100	85.000	ENSDARG00000098536	si:dkey-25i10.1	99	85.000
ENSDARG00000102837	znf1145	100	61.842	ENSDARG00000103721	si:dkey-122c11.7	99	61.161
ENSDARG00000102837	znf1145	100	86.500	ENSDARG00000104407	BX649453.1	99	86.500
ENSDARG00000102837	znf1145	99	58.824	ENSDARG00000074298	znf1015	100	51.010
ENSDARG00000102837	znf1145	100	85.000	ENSDARG00000093994	znf1058	100	85.000
ENSDARG00000102837	znf1145	100	62.946	ENSDARG00000112103	si:dkey-16p19.1	99	62.054
ENSDARG00000102837	znf1145	100	88.000	ENSDARG00000092938	znf1047	99	88.000
ENSDARG00000102837	znf1145	100	91.500	ENSDARG00000098986	znf1040	99	91.500
ENSDARG00000102837	znf1145	100	89.000	ENSDARG00000098071	znf1049	99	89.000
ENSDARG00000102837	znf1145	100	84.500	ENSDARG00000100509	si:dkey-82i20.2	99	84.500
ENSDARG00000102837	znf1145	100	95.000	ENSDARG00000101137	znf999	100	95.238
ENSDARG00000102837	znf1145	100	88.000	ENSDARG00000102600	CABZ01003344.1	99	88.000
ENSDARG00000102837	znf1145	100	51.980	ENSDARG00000101365	si:cabz01021430.2	100	54.286
ENSDARG00000102837	znf1145	100	74.000	ENSDARG00000102791	zgc:174704	99	74.000
ENSDARG00000102837	znf1145	100	68.500	ENSDARG00000113808	si:dkeyp-82b4.6	97	61.161
ENSDARG00000102837	znf1145	100	88.500	ENSDARG00000088000	znf1057	99	88.500
ENSDARG00000102837	znf1145	100	69.500	ENSDARG00000102008	si:dkey-72l17.6	99	62.946
ENSDARG00000102837	znf1145	100	62.946	ENSDARG00000114793	CU182823.4	98	62.054
ENSDARG00000102837	znf1145	100	92.500	ENSDARG00000104074	znf1052	99	92.500
ENSDARG00000102837	znf1145	100	56.303	ENSDARG00000074365	zgc:171901	99	51.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000102837	znf1145	89	63.158	ENSCSEG00000021317	-	91	63.158	Cynoglossus_semilaevis
ENSDARG00000102837	znf1145	65	47.826	ENSCVAG00000003417	-	63	47.826	Cyprinodon_variegatus
ENSDARG00000102837	znf1145	85	52.941	ENSFHEG00000022186	-	75	50.980	Fundulus_heteroclitus
ENSDARG00000102837	znf1145	65	52.381	ENSFHEG00000016520	-	63	52.381	Fundulus_heteroclitus
ENSDARG00000102837	znf1145	60	66.667	ENSKMAG00000002583	-	75	66.667	Kryptolebias_marmoratus
ENSDARG00000102837	znf1145	60	46.970	ENSMZEG00005010493	-	84	53.488	Maylandia_zebra
ENSDARG00000102837	znf1145	88	48.551	ENSPREG00000007431	-	80	48.551	Poecilia_reticulata
ENSDARG00000102837	znf1145	60	60.377	ENSXCOG00000007420	-	95	60.377	Xiphophorus_couchianus