EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000102978 (Gene tree)
Gene ID
394053
Gene Symbol
eif4a3
Alias
ddx48|zgc:56139
Full Name
eukaryotic translation initiation factor 4A3
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
19559 bases
Position
chr11:44878571-44898129
Accession
ZDB-GENE-040426-915
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000135974DEADPF00270.292.6e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000157615-3534-ENSDARP00000135974406 (aa)-A0A0R4IKW3
Gene Model
Click here to download ENSDARG00000102978's gene model file
Pathways
Pathway IDPathway NameSource
dre03013RNA transportKEGG
dre03015mRNA surveillance pathwayKEGG
dre03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000102978's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000102978eif4a39370.106ENSDARG00000092115eif4a1a9370.106
ENSDARG00000102978eif4a39035.946ENSDARG00000015111ddx39ab8635.946
ENSDARG00000102978eif4a39037.931ENSDARG00000005699ddx197837.662
ENSDARG00000102978eif4a39369.048ENSDARG00000003032eif4a1b9369.048
ENSDARG00000102978eif4a39134.236ENSDARG00000005774ddx3xb9737.716
ENSDARG00000102978eif4a38936.612ENSDARG00000006225ddx39aa8536.612
ENSDARG00000102978eif4a39370.899ENSDARG00000016477eif4a29270.899
ENSDARG00000102978eif4a39034.656ENSDARG00000012899ddx498134.115
ENSDARG00000102978eif4a38234.412ENSDARG00000038068ddx56934.412
ENSDARG00000102978eif4a39236.772ENSDARG00000061338ddx67836.772
ENSDARG00000102978eif4a39038.108ENSDARG00000036069ddx39b8438.356
ENSDARG00000102978eif4a38434.551ENSDARG00000014373ddx45234.551
ENSDARG00000102978eif4a38335.860ENSDARG00000010873DDX177133.904
ENSDARG00000102978eif4a38938.770ENSDARG00000044325zgc:1936907938.770
ENSDARG00000102978eif4a38532.578ENSDARG00000022177ddx597032.578
ENSDARG00000102978eif4a39237.566ENSDARG00000018425ddx617837.566
ENSDARG00000102978eif4a39134.152ENSDARG00000020573ddx3xa6033.570
ENSDARG00000102978eif4a38330.726ENSDARG00000009864ddx556030.726
ENSDARG00000102978eif4a38630.471ENSDARG00000030789ddx185530.471
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000102978eif4a310097.044ENSG00000141543EIF4A39997.044Homo_sapiens
ENSDARG00000102978eif4a310098.276ENSAPOG00000017112eif4a310098.276Acanthochromis_polyacanthus
ENSDARG00000102978eif4a39996.758ENSAMEG00000015194EIF4A39996.758Ailuropoda_melanoleuca
ENSDARG00000102978eif4a310098.276ENSACIG00000009719eif4a310098.276Amphilophus_citrinellus
ENSDARG00000102978eif4a310098.276ENSAOCG00000021655eif4a310098.276Amphiprion_ocellaris
ENSDARG00000102978eif4a310098.276ENSAPEG00000018658eif4a310098.276Amphiprion_percula
ENSDARG00000102978eif4a310098.276ENSATEG00000014793eif4a310098.276Anabas_testudineus
ENSDARG00000102978eif4a38798.295ENSAPLG00000014717EIF4A310098.295Anas_platyrhynchos
ENSDARG00000102978eif4a39798.219ENSACAG00000014384EIF4A39198.219Anolis_carolinensis
ENSDARG00000102978eif4a310097.044ENSANAG00000005557EIF4A39997.044Aotus_nancymaae
ENSDARG00000102978eif4a310098.030ENSACLG00000004174eif4a310098.030Astatotilapia_calliptera
ENSDARG00000102978eif4a310098.276ENSAMXG00000020882eif4a310098.276Astyanax_mexicanus
ENSDARG00000102978eif4a310097.044ENSBTAG00000016023EIF4A39997.044Bos_taurus
ENSDARG00000102978eif4a39786.514WBGene00022029Y65B4A.610088.889Caenorhabditis_elegans
ENSDARG00000102978eif4a39786.260WBGene00018007F33D11.109886.260Caenorhabditis_elegans
ENSDARG00000102978eif4a310091.872ENSCJAG00000016777-9991.872Callithrix_jacchus
ENSDARG00000102978eif4a310097.044ENSCJAG00000048589-9997.044Callithrix_jacchus
ENSDARG00000102978eif4a310097.044ENSCAFG00000005614EIF4A39997.044Canis_familiaris
ENSDARG00000102978eif4a310097.044ENSCAFG00020008253EIF4A39997.044Canis_lupus_dingo
ENSDARG00000102978eif4a310097.044ENSCHIG00000024284EIF4A39997.044Capra_hircus
ENSDARG00000102978eif4a310097.044ENSTSYG00000008738EIF4A39997.044Carlito_syrichta
ENSDARG00000102978eif4a38793.521ENSCAPG00000000964EIF4A39293.521Cavia_aperea
ENSDARG00000102978eif4a310097.044ENSCPOG00000006485EIF4A39997.044Cavia_porcellus
ENSDARG00000102978eif4a310097.044ENSCCAG00000036144EIF4A39997.044Cebus_capucinus
ENSDARG00000102978eif4a310097.044ENSCATG00000039262-9997.044Cercocebus_atys
ENSDARG00000102978eif4a310089.409ENSCATG00000039629-9889.409Cercocebus_atys
ENSDARG00000102978eif4a310097.044ENSCLAG00000014502EIF4A39997.044Chinchilla_lanigera
ENSDARG00000102978eif4a38298.193ENSCPBG00000017801EIF4A39898.193Chrysemys_picta_bellii
ENSDARG00000102978eif4a39888.917ENSCING00000007818-9788.917Ciona_intestinalis
ENSDARG00000102978eif4a39191.870ENSCSAVG00000009920-10091.870Ciona_savignyi
ENSDARG00000102978eif4a39881.658ENSCANG00000043503EIF4A39681.658Colobus_angolensis_palliatus
ENSDARG00000102978eif4a310097.044ENSCGRG00001022918-9997.044Cricetulus_griseus_chok1gshd
ENSDARG00000102978eif4a310079.557ENSCGRG00001018048-10079.557Cricetulus_griseus_chok1gshd
ENSDARG00000102978eif4a38798.588ENSCGRG00000017119-10098.588Cricetulus_griseus_crigri
ENSDARG00000102978eif4a310079.310ENSCGRG00000001983-9979.310Cricetulus_griseus_crigri
ENSDARG00000102978eif4a310098.030ENSCSEG00000021058eif4a310098.030Cynoglossus_semilaevis
ENSDARG00000102978eif4a310097.044ENSCVAG00000006864eif4a310097.044Cyprinodon_variegatus
ENSDARG00000102978eif4a38798.592ENSDNOG00000009027EIF4A39698.592Dasypus_novemcinctus
ENSDARG00000102978eif4a310097.044ENSDORG00000013028-9997.044Dipodomys_ordii
ENSDARG00000102978eif4a39787.277FBgn0037573CG74839887.277Drosophila_melanogaster
ENSDARG00000102978eif4a39894.962ENSEBUG00000003713eif4a39294.962Eptatretus_burgeri
ENSDARG00000102978eif4a310097.044ENSEASG00005005107EIF4A39997.044Equus_asinus_asinus
ENSDARG00000102978eif4a310097.044ENSECAG00000015925EIF4A39997.044Equus_caballus
ENSDARG00000102978eif4a310090.640ENSEEUG00000006008EIF4A39990.640Erinaceus_europaeus
ENSDARG00000102978eif4a310098.276ENSELUG00000018528eif4a310098.276Esox_lucius
ENSDARG00000102978eif4a310097.044ENSFCAG00000008246EIF4A39997.044Felis_catus
ENSDARG00000102978eif4a38798.592ENSFALG00000002343EIF4A310098.592Ficedula_albicollis
ENSDARG00000102978eif4a310097.044ENSFDAG00000020774EIF4A39997.044Fukomys_damarensis
ENSDARG00000102978eif4a39799.235ENSGMOG00000001560eif4a310099.235Gadus_morhua
ENSDARG00000102978eif4a39898.241ENSGALG00000008530EIF4A39798.241Gallus_gallus
ENSDARG00000102978eif4a310097.783ENSGAFG00000013487eif4a310097.783Gambusia_affinis
ENSDARG00000102978eif4a310098.030ENSGACG00000020004eif4a310098.030Gasterosteus_aculeatus
ENSDARG00000102978eif4a310097.044ENSGAGG00000016434EIF4A310097.044Gopherus_agassizii
ENSDARG00000102978eif4a310097.044ENSGGOG00000012918EIF4A39997.044Gorilla_gorilla
ENSDARG00000102978eif4a310098.276ENSHBUG00000014892eif4a310098.276Haplochromis_burtoni
ENSDARG00000102978eif4a310097.044ENSHGLG00000004635EIF4A39997.044Heterocephalus_glaber_female
ENSDARG00000102978eif4a310097.044ENSHGLG00100006837EIF4A39997.044Heterocephalus_glaber_male
ENSDARG00000102978eif4a39984.352ENSHCOG00000011335eif4a38884.352Hippocampus_comes
ENSDARG00000102978eif4a310097.537ENSIPUG00000021785eif4a310097.537Ictalurus_punctatus
ENSDARG00000102978eif4a310097.044ENSSTOG00000002664EIF4A39997.044Ictidomys_tridecemlineatus
ENSDARG00000102978eif4a39898.241ENSJJAG00000015870-9798.241Jaculus_jaculus
ENSDARG00000102978eif4a39897.739ENSJJAG00000016503-9797.739Jaculus_jaculus
ENSDARG00000102978eif4a39994.514ENSKMAG00000010113eif4a39394.514Kryptolebias_marmoratus
ENSDARG00000102978eif4a38998.623ENSLBEG00000020356eif4a39798.623Labrus_bergylta
ENSDARG00000102978eif4a310097.537ENSLACG00000000108EIF4A310097.537Latimeria_chalumnae
ENSDARG00000102978eif4a310098.522ENSLOCG00000015796eif4a39998.522Lepisosteus_oculatus
ENSDARG00000102978eif4a310097.044ENSLAFG00000015628EIF4A39997.044Loxodonta_africana
ENSDARG00000102978eif4a39790.331ENSMFAG00000018955-9790.331Macaca_fascicularis
ENSDARG00000102978eif4a310097.044ENSMFAG00000043778EIF4A39997.044Macaca_fascicularis
ENSDARG00000102978eif4a39590.181ENSMMUG00000007050-9690.181Macaca_mulatta
ENSDARG00000102978eif4a310096.798ENSMMUG00000009590EIF4A39996.798Macaca_mulatta
ENSDARG00000102978eif4a39997.007ENSMNEG00000039333-9397.007Macaca_nemestrina
ENSDARG00000102978eif4a39790.561ENSMNEG00000038447-9890.331Macaca_nemestrina
ENSDARG00000102978eif4a38798.588ENSMLEG00000032948EIF4A310098.588Mandrillus_leucophaeus
ENSDARG00000102978eif4a310098.276ENSMAMG00000017369eif4a310098.276Mastacembelus_armatus
ENSDARG00000102978eif4a310090.640ENSMZEG00005015371eif4a310090.640Maylandia_zebra
ENSDARG00000102978eif4a310098.276ENSMZEG00005000259-10098.276Maylandia_zebra
ENSDARG00000102978eif4a38798.592ENSMGAG00000007270EIF4A310098.592Meleagris_gallopavo
ENSDARG00000102978eif4a310097.044ENSMAUG00000012955-9997.044Mesocricetus_auratus
ENSDARG00000102978eif4a310091.133ENSMICG00000041585-9891.133Microcebus_murinus
ENSDARG00000102978eif4a39891.206ENSMICG00000045127-9891.206Microcebus_murinus
ENSDARG00000102978eif4a310089.901ENSMICG00000044243-10089.901Microcebus_murinus
ENSDARG00000102978eif4a39888.161ENSMICG00000011946-9688.161Microcebus_murinus
ENSDARG00000102978eif4a39895.980ENSMICG00000034467-9895.980Microcebus_murinus
ENSDARG00000102978eif4a310091.463ENSMICG00000009136-9991.463Microcebus_murinus
ENSDARG00000102978eif4a310094.570ENSMOCG00000017297-9871.117Microtus_ochrogaster
ENSDARG00000102978eif4a39992.593ENSMMOG00000018352eif4a39392.593Mola_mola
ENSDARG00000102978eif4a39892.191ENSMODG00000003697-9792.191Monodelphis_domestica
ENSDARG00000102978eif4a310097.044ENSMODG00000002190-9997.044Monodelphis_domestica
ENSDARG00000102978eif4a310097.783ENSMALG00000016324eif4a310097.783Monopterus_albus
ENSDARG00000102978eif4a310096.798MGP_CAROLIEiJ_G0017495-9996.798Mus_caroli
ENSDARG00000102978eif4a310094.335ENSMUSG00000094973Gm89949994.335Mus_musculus
ENSDARG00000102978eif4a310097.291ENSMUSG00000025580Eif4a39997.291Mus_musculus
ENSDARG00000102978eif4a310095.567ENSMUSG00000107906Gm55809995.567Mus_musculus
ENSDARG00000102978eif4a310097.044MGP_PahariEiJ_G0018622-9997.044Mus_pahari
ENSDARG00000102978eif4a310097.044MGP_SPRETEiJ_G0018339Eif4a39997.044Mus_spretus
ENSDARG00000102978eif4a38798.592ENSMPUG00000012216EIF4A38498.592Mustela_putorius_furo
ENSDARG00000102978eif4a38883.754ENSMLUG00000024690-10083.754Myotis_lucifugus
ENSDARG00000102978eif4a39891.960ENSMLUG00000012233-9791.960Myotis_lucifugus
ENSDARG00000102978eif4a38595.362ENSMLUG00000009585-10095.362Myotis_lucifugus
ENSDARG00000102978eif4a310097.044ENSNGAG00000003189-9997.044Nannospalax_galili
ENSDARG00000102978eif4a310098.030ENSNBRG00000021671eif4a310098.030Neolamprologus_brichardi
ENSDARG00000102978eif4a310097.044ENSNLEG00000015595EIF4A39997.044Nomascus_leucogenys
ENSDARG00000102978eif4a310086.453ENSMEUG00000008521EIF4A39986.453Notamacropus_eugenii
ENSDARG00000102978eif4a310097.044ENSODEG00000010300EIF4A39997.044Octodon_degus
ENSDARG00000102978eif4a310098.030ENSONIG00000019828eif4a310098.030Oreochromis_niloticus
ENSDARG00000102978eif4a36893.502ENSOANG00000000334EIF4A39793.502Ornithorhynchus_anatinus
ENSDARG00000102978eif4a310097.783ENSORLG00000018405eif4a310097.783Oryzias_latipes
ENSDARG00000102978eif4a310097.783ENSOMEG00000007998eif4a310097.783Oryzias_melastigma
ENSDARG00000102978eif4a310096.552ENSOGAG00000026206-9996.552Otolemur_garnettii
ENSDARG00000102978eif4a310097.044ENSOGAG00000007495-9997.044Otolemur_garnettii
ENSDARG00000102978eif4a310097.044ENSOARG00000002169-9997.044Ovis_aries
ENSDARG00000102978eif4a310093.350ENSOARG00000005144-9993.350Ovis_aries
ENSDARG00000102978eif4a38291.592ENSPPAG00000021017-8991.265Pan_paniscus
ENSDARG00000102978eif4a310097.044ENSPPRG00000021873EIF4A39997.044Panthera_pardus
ENSDARG00000102978eif4a38997.222ENSPTIG00000009646EIF4A39997.222Panthera_tigris_altaica
ENSDARG00000102978eif4a310094.595ENSPTRG00000009737EIF4A39994.595Pan_troglodytes
ENSDARG00000102978eif4a310097.044ENSPANG00000019672-9997.044Papio_anubis
ENSDARG00000102978eif4a310087.685ENSPANG00000021217-9887.685Papio_anubis
ENSDARG00000102978eif4a310097.783ENSPKIG00000016912eif4a310097.783Paramormyrops_kingsleyae
ENSDARG00000102978eif4a36999.642ENSPSIG00000004036EIF4A310099.642Pelodiscus_sinensis
ENSDARG00000102978eif4a310097.044ENSPEMG00000009441-9997.044Peromyscus_maniculatus_bairdii
ENSDARG00000102978eif4a38898.039ENSPCIG00000005856-9898.580Phascolarctos_cinereus
ENSDARG00000102978eif4a310097.783ENSPFOG00000009300eif4a39897.783Poecilia_formosa
ENSDARG00000102978eif4a310097.783ENSPLAG00000007436eif4a310097.783Poecilia_latipinna
ENSDARG00000102978eif4a310097.783ENSPMEG00000008078eif4a310097.783Poecilia_mexicana
ENSDARG00000102978eif4a310097.783ENSPREG00000006006eif4a310097.783Poecilia_reticulata
ENSDARG00000102978eif4a310097.044ENSPPYG00000008714EIF4A39997.044Pongo_abelii
ENSDARG00000102978eif4a39882.161ENSPCAG00000002931EIF4A39881.281Procavia_capensis
ENSDARG00000102978eif4a310097.044ENSPCOG00000020004EIF4A39997.044Propithecus_coquereli
ENSDARG00000102978eif4a310097.044ENSPVAG00000003627EIF4A39997.044Pteropus_vampyrus
ENSDARG00000102978eif4a310098.276ENSPNYG00000016865eif4a310098.276Pundamilia_nyererei
ENSDARG00000102978eif4a310098.276ENSPNAG00000008053eif4a310098.276Pygocentrus_nattereri
ENSDARG00000102978eif4a310097.044ENSRNOG00000045791Eif4a39997.044Rattus_norvegicus
ENSDARG00000102978eif4a310097.044ENSRBIG00000029705EIF4A39997.044Rhinopithecus_bieti
ENSDARG00000102978eif4a310097.044ENSRROG00000042322EIF4A39997.044Rhinopithecus_roxellana
ENSDARG00000102978eif4a39263.978YJL138CTIF29463.978Saccharomyces_cerevisiae
ENSDARG00000102978eif4a39761.519YDR021W-9961.519Saccharomyces_cerevisiae
ENSDARG00000102978eif4a39263.978YKR059WTIF19463.978Saccharomyces_cerevisiae
ENSDARG00000102978eif4a310097.044ENSSBOG00000024694EIF4A39997.044Saimiri_boliviensis_boliviensis
ENSDARG00000102978eif4a310097.044ENSSHAG00000004638-9097.044Sarcophilus_harrisii
ENSDARG00000102978eif4a39897.739ENSSHAG00000005751-9797.739Sarcophilus_harrisii
ENSDARG00000102978eif4a310097.537ENSSFOG00015004896-10097.537Scleropages_formosus
ENSDARG00000102978eif4a310097.291ENSSFOG00015022017eif4a310097.291Scleropages_formosus
ENSDARG00000102978eif4a310098.030ENSSMAG00000021078eif4a310098.030Scophthalmus_maximus
ENSDARG00000102978eif4a310097.783ENSSDUG00000021512eif4a310097.783Seriola_dumerili
ENSDARG00000102978eif4a39096.978ENSSLDG00000010112eif4a39396.978Seriola_lalandi_dorsalis
ENSDARG00000102978eif4a35598.661ENSSARG00000009017-10098.661Sorex_araneus
ENSDARG00000102978eif4a39997.519ENSSPUG00000013935EIF4A39897.519Sphenodon_punctatus
ENSDARG00000102978eif4a39998.005ENSSPAG00000017012eif4a39898.005Stegastes_partitus
ENSDARG00000102978eif4a310097.044ENSSSCG00000017155EIF4A39997.044Sus_scrofa
ENSDARG00000102978eif4a38198.485ENSTGUG00000002132EIF4A310098.485Taeniopygia_guttata
ENSDARG00000102978eif4a310098.276ENSTRUG00000011543eif4a310098.276Takifugu_rubripes
ENSDARG00000102978eif4a310097.789ENSTNIG00000002924eif4a39997.789Tetraodon_nigroviridis
ENSDARG00000102978eif4a38787.571ENSTTRG00000000514EIF4A310087.571Tursiops_truncatus
ENSDARG00000102978eif4a310097.044ENSUAMG00000027453EIF4A39997.044Ursus_americanus
ENSDARG00000102978eif4a39492.468ENSUMAG00000014617EIF4A39998.011Ursus_maritimus
ENSDARG00000102978eif4a310097.044ENSVVUG00000017984EIF4A39997.044Vulpes_vulpes
ENSDARG00000102978eif4a39899.246ENSXETG00000013720eif4a39699.246Xenopus_tropicalis
ENSDARG00000102978eif4a310096.552ENSXCOG00000010824eif4a39996.552Xiphophorus_couchianus
ENSDARG00000102978eif4a310097.783ENSXMAG00000014111eif4a310097.783Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay-IEAProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome-ISSProcess
GO:0000398mRNA splicing, via spliceosome-ISSProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0004386helicase activity-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0005634nucleus-ISSComponent
GO:0005681spliceosomal complex-IEAComponent
GO:0005737cytoplasm-IEAComponent
GO:0006397mRNA processing-IEAProcess
GO:0006417regulation of translation-IEAProcess
GO:0008380RNA splicing-IEAProcess
GO:0016607nuclear speck-IEAComponent
GO:0016787hydrolase activity-IEAFunction
GO:0051028mRNA transport-IEAProcess
GO:0071006U2-type catalytic step 1 spliceosome-ISSComponent

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