EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000103037 (Gene tree)
Gene ID: -
Gene Symbol: CR848788.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5343 bases
Position: chr16:5607138-5612480
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000141714	RVT_1	PF00078.27	2.4e-51	1	1
ENSDARP00000141714	RNase_H	PF00075.24	1.2e-15	1	1
ENSDARP00000141714	Exo_endo_phos	PF03372.23	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000157944	CR848788.1-201	5343	-	ENSDARP00000141714	1253 (aa)	-	A0A0G2LA86

Gene Model

Click here to download ENSDARG00000103037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000103037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000103037	CR848788.1	100	99.282	ENSDARG00000099201	BX908731.1	100	99.282
ENSDARG00000103037	CR848788.1	100	49.402	ENSDARG00000103436	BX548028.1	99	49.402

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000103037	CR848788.1	99	48.169	ENSAMXG00000043500	-	99	48.169	Astyanax_mexicanus
ENSDARG00000103037	CR848788.1	99	45.288	ENSKMAG00000003982	-	99	45.288	Kryptolebias_marmoratus
ENSDARG00000103037	CR848788.1	68	47.636	ENSKMAG00000012711	-	100	47.636	Kryptolebias_marmoratus
ENSDARG00000103037	CR848788.1	65	49.630	ENSKMAG00000021014	-	100	49.630	Kryptolebias_marmoratus
ENSDARG00000103037	CR848788.1	99	45.288	ENSKMAG00000004415	-	99	45.288	Kryptolebias_marmoratus
ENSDARG00000103037	CR848788.1	100	45.939	ENSORLG00000023592	-	100	45.939	Oryzias_latipes
ENSDARG00000103037	CR848788.1	100	45.939	ENSORLG00000027174	-	100	45.939	Oryzias_latipes
ENSDARG00000103037	CR848788.1	100	45.939	ENSORLG00000026314	-	100	45.939	Oryzias_latipes
ENSDARG00000103037	CR848788.1	100	45.737	ENSORLG00000024423	-	100	45.737	Oryzias_latipes
ENSDARG00000103037	CR848788.1	100	46.056	ENSORLG00020020238	-	100	46.056	Oryzias_latipes_hni
ENSDARG00000103037	CR848788.1	71	46.249	ENSORLG00020019901	-	100	46.249	Oryzias_latipes_hni
ENSDARG00000103037	CR848788.1	100	46.135	ENSORLG00020011427	-	100	46.135	Oryzias_latipes_hni
ENSDARG00000103037	CR848788.1	100	46.056	ENSORLG00020018543	-	100	46.056	Oryzias_latipes_hni
ENSDARG00000103037	CR848788.1	88	46.770	ENSORLG00015013792	-	99	46.770	Oryzias_latipes_hsok
ENSDARG00000103037	CR848788.1	85	47.712	ENSOMEG00000003836	-	98	47.712	Oryzias_melastigma
ENSDARG00000103037	CR848788.1	99	47.791	ENSPKIG00000019189	-	99	47.749	Paramormyrops_kingsleyae
ENSDARG00000103037	CR848788.1	82	44.055	ENSXMAG00000027130	-	99	44.055	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	87	47.243	ENSXMAG00000022223	-	96	47.243	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	99	47.352	ENSXMAG00000021755	-	99	47.684	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	99	46.283	ENSXMAG00000021061	-	99	46.283	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	71	54.994	ENSXMAG00000024143	-	100	54.994	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	99	47.352	ENSXMAG00000021070	-	99	47.684	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	82	43.762	ENSXMAG00000029923	-	99	43.762	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	87	47.243	ENSXMAG00000026588	-	96	47.243	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	92	53.368	ENSXMAG00000029466	-	100	53.368	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	99	47.036	ENSXMAG00000028309	-	99	47.364	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	63	48.477	ENSXMAG00000023377	-	100	48.477	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	64	46.393	ENSXMAG00000023126	-	100	46.393	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	87	47.243	ENSXMAG00000026248	-	96	47.243	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	69	46.767	ENSXMAG00000020874	-	95	46.767	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	82	43.860	ENSXMAG00000023078	-	99	43.860	Xiphophorus_maculatus
ENSDARG00000103037	CR848788.1	60	42.404	ENSXMAG00000025430	-	99	42.404	Xiphophorus_maculatus