EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000103057 (Gene tree)
Gene ID: 100333211
Gene Symbol: zfhx3
Alias: fd23d06|fj32b02|im:7148790|wu:fd23d06|wu:fj32b02
Full Name: zinc finger homeobox 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 158561 bases
Position: chr7:68214935-68373495
Accession: ZDB-GENE-030131-7577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000138913	zf-C2H2	PF00096.26	1.3e-11	1	2
ENSDARP00000138913	zf-C2H2	PF00096.26	1.3e-11	2	2
ENSDARP00000138913	zf-met	PF12874.7	4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000167440	-	16288	XM_021478047	ENSDARP00000138913	3838 (aa)	XP_021333722	A0A0R4ISP1

Gene Model

Click here to download ENSDARG00000103057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000103057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000103057	zfhx3	92	49.253	ENSDARG00000073944	si:ch73-386h18.1	74	50.990
ENSDARG00000103057	zfhx3	95	50.892	ENSDARG00000075542	zfhx4	77	64.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000103057	zfhx3	100	61.878	ENSG00000140836	ZFHX3	100	64.949	Homo_sapiens
ENSDARG00000103057	zfhx3	100	81.420	ENSAPOG00000010102	zfhx3	100	81.704	Acanthochromis_polyacanthus
ENSDARG00000103057	zfhx3	100	79.526	ENSACIG00000000652	zfhx3	100	79.928	Amphilophus_citrinellus
ENSDARG00000103057	zfhx3	100	81.136	ENSAPEG00000011530	zfhx3	100	81.547	Amphiprion_percula
ENSDARG00000103057	zfhx3	100	80.736	ENSATEG00000004640	zfhx3	100	80.650	Anabas_testudineus
ENSDARG00000103057	zfhx3	92	64.122	ENSAPLG00000002327	ZFHX3	98	63.576	Anas_platyrhynchos
ENSDARG00000103057	zfhx3	100	61.959	ENSANAG00000033325	ZFHX3	97	63.080	Aotus_nancymaae
ENSDARG00000103057	zfhx3	100	79.254	ENSACLG00000001914	zfhx3	100	79.598	Astatotilapia_calliptera
ENSDARG00000103057	zfhx3	100	86.675	ENSAMXG00000004340	zfhx3	100	86.830	Astyanax_mexicanus
ENSDARG00000103057	zfhx3	95	63.485	ENSBTAG00000014636	ZFHX3	86	64.108	Bos_taurus
ENSDARG00000103057	zfhx3	100	62.399	ENSCAFG00000020243	ZFHX3	86	64.206	Canis_familiaris
ENSDARG00000103057	zfhx3	100	62.702	ENSCAFG00020020336	ZFHX3	86	64.464	Canis_lupus_dingo
ENSDARG00000103057	zfhx3	100	61.201	ENSCHIG00000018446	ZFHX3	85	66.080	Capra_hircus
ENSDARG00000103057	zfhx3	91	64.434	ENSCAPG00000010889	ZFHX3	96	64.084	Cavia_aperea
ENSDARG00000103057	zfhx3	91	64.771	ENSCPOG00000009111	ZFHX3	96	63.532	Cavia_porcellus
ENSDARG00000103057	zfhx3	95	63.242	ENSCLAG00000007000	ZFHX3	86	63.876	Chinchilla_lanigera
ENSDARG00000103057	zfhx3	100	60.928	ENSCGRG00000001001	Zfhx3	94	64.106	Cricetulus_griseus_crigri
ENSDARG00000103057	zfhx3	100	77.726	ENSCSEG00000001762	zfhx3	100	78.344	Cynoglossus_semilaevis
ENSDARG00000103057	zfhx3	100	79.218	ENSCVAG00000000602	zfhx3	100	78.533	Cyprinodon_variegatus
ENSDARG00000103057	zfhx3	96	63.863	ENSDNOG00000046047	ZFHX3	97	63.303	Dasypus_novemcinctus
ENSDARG00000103057	zfhx3	100	62.585	ENSEASG00005021387	ZFHX3	86	64.600	Equus_asinus_asinus
ENSDARG00000103057	zfhx3	100	62.544	ENSECAG00000022984	ZFHX3	86	64.610	Equus_caballus
ENSDARG00000103057	zfhx3	82	66.655	ENSEEUG00000008705	ZFHX3	92	65.855	Erinaceus_europaeus
ENSDARG00000103057	zfhx3	100	82.018	ENSELUG00000014311	zfhx3	100	81.511	Esox_lucius
ENSDARG00000103057	zfhx3	100	62.636	ENSFCAG00000023839	ZFHX3	86	64.404	Felis_catus
ENSDARG00000103057	zfhx3	84	72.917	ENSFALG00000002706	ZFHX3	82	68.657	Ficedula_albicollis
ENSDARG00000103057	zfhx3	95	62.372	ENSFDAG00000015753	ZFHX3	97	62.375	Fukomys_damarensis
ENSDARG00000103057	zfhx3	100	79.020	ENSFHEG00000013474	zfhx3	97	82.510	Fundulus_heteroclitus
ENSDARG00000103057	zfhx3	100	79.256	ENSGMOG00000002909	zfhx3	100	78.760	Gadus_morhua
ENSDARG00000103057	zfhx3	96	62.190	ENSGALG00000000713	ZFHX3	84	65.691	Gallus_gallus
ENSDARG00000103057	zfhx3	100	79.382	ENSGAFG00000017278	zfhx3	100	79.439	Gambusia_affinis
ENSDARG00000103057	zfhx3	100	78.329	ENSGACG00000015779	zfhx3	100	77.973	Gasterosteus_aculeatus
ENSDARG00000103057	zfhx3	100	61.595	ENSGAGG00000002102	ZFHX3	97	63.361	Gopherus_agassizii
ENSDARG00000103057	zfhx3	100	79.306	ENSHBUG00000013200	zfhx3	100	79.727	Haplochromis_burtoni
ENSDARG00000103057	zfhx3	95	62.715	ENSHGLG00000012541	ZFHX3	86	63.655	Heterocephalus_glaber_female
ENSDARG00000103057	zfhx3	95	62.702	ENSHGLG00100000797	ZFHX3	86	63.553	Heterocephalus_glaber_male
ENSDARG00000103057	zfhx3	100	78.896	ENSHCOG00000003135	zfhx3	100	78.270	Hippocampus_comes
ENSDARG00000103057	zfhx3	100	85.518	ENSIPUG00000006119	zfhx3	100	85.363	Ictalurus_punctatus
ENSDARG00000103057	zfhx3	100	61.898	ENSSTOG00000027206	ZFHX3	86	64.862	Ictidomys_tridecemlineatus
ENSDARG00000103057	zfhx3	100	80.263	ENSKMAG00000006781	zfhx3	100	80.469	Kryptolebias_marmoratus
ENSDARG00000103057	zfhx3	100	80.314	ENSLBEG00000026326	zfhx3	100	79.459	Labrus_bergylta
ENSDARG00000103057	zfhx3	100	78.900	ENSLOCG00000004206	zfhx3	100	79.074	Lepisosteus_oculatus
ENSDARG00000103057	zfhx3	100	80.984	ENSMAMG00000021509	zfhx3	100	81.007	Mastacembelus_armatus
ENSDARG00000103057	zfhx3	100	79.229	ENSMZEG00005014216	zfhx3	100	79.649	Maylandia_zebra
ENSDARG00000103057	zfhx3	77	67.509	ENSMGAG00000008764	ZFHX3	98	67.767	Meleagris_gallopavo
ENSDARG00000103057	zfhx3	95	64.060	ENSMICG00000003537	ZFHX3	97	63.475	Microcebus_murinus
ENSDARG00000103057	zfhx3	100	79.985	ENSMMOG00000016551	zfhx3	100	80.067	Mola_mola
ENSDARG00000103057	zfhx3	100	80.510	ENSMALG00000021055	zfhx3	100	80.733	Monopterus_albus
ENSDARG00000103057	zfhx3	51	59.712	ENSMPUG00000007747	ZFHX3	51	60.447	Mustela_putorius_furo
ENSDARG00000103057	zfhx3	95	64.043	ENSMLUG00000016100	ZFHX3	97	63.747	Myotis_lucifugus
ENSDARG00000103057	zfhx3	95	63.154	ENSNGAG00000001724	Zfhx3	63	62.364	Nannospalax_galili
ENSDARG00000103057	zfhx3	100	79.284	ENSNBRG00000010822	zfhx3	100	79.948	Neolamprologus_brichardi
ENSDARG00000103057	zfhx3	66	80.576	ENSONIG00000005914	zfhx3	99	81.603	Oreochromis_niloticus
ENSDARG00000103057	zfhx3	86	63.896	ENSOANG00000005084	ZFHX3	97	63.169	Ornithorhynchus_anatinus
ENSDARG00000103057	zfhx3	87	65.024	ENSOCUG00000017910	-	98	64.687	Oryctolagus_cuniculus
ENSDARG00000103057	zfhx3	100	78.588	ENSORLG00000007874	zfhx3	100	77.595	Oryzias_latipes
ENSDARG00000103057	zfhx3	100	78.434	ENSORLG00020009729	zfhx3	100	77.595	Oryzias_latipes_hni
ENSDARG00000103057	zfhx3	100	78.371	ENSORLG00015007912	zfhx3	100	77.687	Oryzias_latipes_hsok
ENSDARG00000103057	zfhx3	100	78.881	ENSOMEG00000001800	zfhx3	100	77.960	Oryzias_melastigma
ENSDARG00000103057	zfhx3	100	61.692	ENSPPRG00000005184	ZFHX3	86	63.747	Panthera_pardus
ENSDARG00000103057	zfhx3	100	62.127	ENSPTRG00000008340	ZFHX3	97	63.354	Pan_troglodytes
ENSDARG00000103057	zfhx3	99	75.825	ENSPKIG00000001525	-	100	75.599	Paramormyrops_kingsleyae
ENSDARG00000103057	zfhx3	96	78.719	ENSPKIG00000009598	zfhx3	98	77.523	Paramormyrops_kingsleyae
ENSDARG00000103057	zfhx3	100	77.844	ENSPMGG00000006062	zfhx3	100	77.494	Periophthalmus_magnuspinnatus
ENSDARG00000103057	zfhx3	100	60.557	ENSPEMG00000010630	Zfhx3	94	64.151	Peromyscus_maniculatus_bairdii
ENSDARG00000103057	zfhx3	100	79.800	ENSPFOG00000001702	zfhx3	100	79.625	Poecilia_formosa
ENSDARG00000103057	zfhx3	100	80.263	ENSPLAG00000018955	zfhx3	100	80.026	Poecilia_latipinna
ENSDARG00000103057	zfhx3	100	79.389	ENSPMEG00000022333	zfhx3	100	79.394	Poecilia_mexicana
ENSDARG00000103057	zfhx3	100	79.758	ENSPREG00000023212	zfhx3	100	79.892	Poecilia_reticulata
ENSDARG00000103057	zfhx3	84	65.486	ENSPPYG00000007513	ZFHX3	98	65.638	Pongo_abelii
ENSDARG00000103057	zfhx3	87	63.605	ENSPCAG00000010600	ZFHX3	60	65.502	Procavia_capensis
ENSDARG00000103057	zfhx3	95	64.472	ENSPCOG00000025382	ZFHX3	63	64.245	Propithecus_coquereli
ENSDARG00000103057	zfhx3	96	63.898	ENSPVAG00000006664	ZFHX3	90	64.592	Pteropus_vampyrus
ENSDARG00000103057	zfhx3	100	79.205	ENSPNYG00000013409	zfhx3	100	79.573	Pundamilia_nyererei
ENSDARG00000103057	zfhx3	100	61.967	ENSRNOG00000014452	Zfhx3	100	61.426	Rattus_norvegicus
ENSDARG00000103057	zfhx3	100	78.038	ENSSFOG00015014986	zfhx3	100	77.050	Scleropages_formosus
ENSDARG00000103057	zfhx3	100	76.003	ENSSFOG00015019511	zfhx3	100	77.029	Scleropages_formosus
ENSDARG00000103057	zfhx3	100	79.929	ENSSMAG00000000110	zfhx3	100	79.229	Scophthalmus_maximus
ENSDARG00000103057	zfhx3	98	89.655	ENSSDUG00000017102	zfhx3	100	82.527	Seriola_dumerili
ENSDARG00000103057	zfhx3	100	81.204	ENSSLDG00000013212	zfhx3	100	81.101	Seriola_lalandi_dorsalis
ENSDARG00000103057	zfhx3	100	81.236	ENSSPAG00000002113	zfhx3	100	81.107	Stegastes_partitus
ENSDARG00000103057	zfhx3	100	61.953	ENSSSCG00000002752	ZFHX3	86	64.271	Sus_scrofa
ENSDARG00000103057	zfhx3	92	60.088	ENSTGUG00000008190	ZFHX3	90	64.149	Taeniopygia_guttata
ENSDARG00000103057	zfhx3	100	78.066	ENSTRUG00000017601	zfhx3	100	78.273	Takifugu_rubripes
ENSDARG00000103057	zfhx3	100	62.346	ENSVVUG00000017344	ZFHX3	86	64.561	Vulpes_vulpes
ENSDARG00000103057	zfhx3	100	79.661	ENSXMAG00000027288	zfhx3	100	79.481	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	21873635.	IBA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0043565	sequence-specific DNA binding	-	IEA	Function
GO:0044212	transcription regulatory region DNA binding	21873635.	IBA	Function
GO:0045893	positive regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function