EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000103403 (Gene tree)
Gene ID: 554177
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated%2C Ras related GTPase 1B
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 11631 bases
Position: chr21:45673433-45685063
Accession: ZDB-GENE-040426-1958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000136017	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000162422	-	2024	-	ENSDARP00000136017	198 (aa)	-	Q6PBX2

Gene Model

Click here to download ENSDARG00000103403's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000103403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000103403	sar1b	89	32.222	ENSDARG00000063223	arl14	84	32.222
ENSDARG00000103403	sar1b	73	33.557	ENSDARG00000032708	arl4cb	75	33.557
ENSDARG00000103403	sar1b	87	32.759	ENSDARG00000074210	ARF5	78	32.759
ENSDARG00000103403	sar1b	73	34.437	ENSDARG00000099918	arl4aa	76	34.437
ENSDARG00000103403	sar1b	65	31.250	ENSDARG00000056794	zgc:110197	71	31.250
ENSDARG00000103403	sar1b	68	31.618	ENSDARG00000016393	arf2b	94	31.618
ENSDARG00000103403	sar1b	88	30.286	ENSDARG00000045989	arf4a	91	30.286
ENSDARG00000103403	sar1b	100	87.879	ENSDARG00000033320	sar1ab	100	87.879
ENSDARG00000103403	sar1b	94	30.000	ENSDARG00000032056	arl6	96	30.000
ENSDARG00000103403	sar1b	87	30.814	ENSDARG00000113899	zgc:77650	89	30.814
ENSDARG00000103403	sar1b	54	32.143	ENSDARG00000014763	arf2a	95	32.143
ENSDARG00000103403	sar1b	87	30.814	ENSDARG00000070472	arf5	89	30.814
ENSDARG00000103403	sar1b	66	31.618	ENSDARG00000045074	arl4d	68	31.618
ENSDARG00000103403	sar1b	94	30.108	ENSDARG00000111106	arl3l1	93	30.108
ENSDARG00000103403	sar1b	73	33.333	ENSDARG00000057606	arl4ca	76	33.333
ENSDARG00000103403	sar1b	73	31.126	ENSDARG00000033182	arl4ab	73	31.126
ENSDARG00000103403	sar1b	85	30.000	ENSDARG00000036637	arl11	90	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000103403	sar1b	100	86.364	ENSAPOG00000017891	-	100	86.364	Acanthochromis_polyacanthus
ENSDARG00000103403	sar1b	100	94.444	ENSAPOG00000007186	sar1b	100	94.444	Acanthochromis_polyacanthus
ENSDARG00000103403	sar1b	100	94.444	ENSACIG00000013634	sar1b	100	94.444	Amphilophus_citrinellus
ENSDARG00000103403	sar1b	100	84.848	ENSACIG00000024513	-	100	84.848	Amphilophus_citrinellus
ENSDARG00000103403	sar1b	100	86.364	ENSAOCG00000002627	-	100	86.364	Amphiprion_ocellaris
ENSDARG00000103403	sar1b	100	93.939	ENSAOCG00000005888	sar1b	100	93.939	Amphiprion_ocellaris
ENSDARG00000103403	sar1b	100	86.364	ENSAPEG00000019680	-	100	86.364	Amphiprion_percula
ENSDARG00000103403	sar1b	100	93.939	ENSAPEG00000022771	sar1b	100	93.939	Amphiprion_percula
ENSDARG00000103403	sar1b	100	91.919	ENSATEG00000012904	sar1b	100	91.919	Anabas_testudineus
ENSDARG00000103403	sar1b	100	84.343	ENSATEG00000023368	-	100	84.343	Anabas_testudineus
ENSDARG00000103403	sar1b	100	92.424	ENSACAG00000001470	-	100	92.424	Anolis_carolinensis
ENSDARG00000103403	sar1b	100	94.444	ENSACLG00000014649	sar1b	100	94.444	Astatotilapia_calliptera
ENSDARG00000103403	sar1b	100	85.859	ENSACLG00000005011	-	100	85.859	Astatotilapia_calliptera
ENSDARG00000103403	sar1b	100	87.374	ENSAMXG00000034192	-	91	87.374	Astyanax_mexicanus
ENSDARG00000103403	sar1b	59	98.291	ENSAMXG00000018108	sar1b	84	98.291	Astyanax_mexicanus
ENSDARG00000103403	sar1b	100	85.859	ENSCSEG00000016976	-	100	85.859	Cynoglossus_semilaevis
ENSDARG00000103403	sar1b	100	87.374	ENSCSEG00000015238	sar1b	97	87.374	Cynoglossus_semilaevis
ENSDARG00000103403	sar1b	100	95.455	ENSCVAG00000022959	sar1b	100	95.455	Cyprinodon_variegatus
ENSDARG00000103403	sar1b	99	71.939	FBgn0038947	Sar1	99	71.939	Drosophila_melanogaster
ENSDARG00000103403	sar1b	97	88.542	ENSEBUG00000011723	sar1b	97	88.542	Eptatretus_burgeri
ENSDARG00000103403	sar1b	100	96.970	ENSELUG00000020912	sar1b	100	96.970	Esox_lucius
ENSDARG00000103403	sar1b	100	93.939	ENSFHEG00000019865	sar1b	100	93.939	Fundulus_heteroclitus
ENSDARG00000103403	sar1b	100	94.949	ENSGMOG00000008023	sar1b	100	94.949	Gadus_morhua
ENSDARG00000103403	sar1b	100	92.929	ENSGAFG00000007081	sar1b	100	92.929	Gambusia_affinis
ENSDARG00000103403	sar1b	100	91.919	ENSGACG00000001474	sar1b	100	91.919	Gasterosteus_aculeatus
ENSDARG00000103403	sar1b	100	94.444	ENSHBUG00000000915	sar1b	100	94.444	Haplochromis_burtoni
ENSDARG00000103403	sar1b	100	85.859	ENSHBUG00000018397	-	100	85.859	Haplochromis_burtoni
ENSDARG00000103403	sar1b	100	94.444	ENSHCOG00000010953	sar1b	100	94.444	Hippocampus_comes
ENSDARG00000103403	sar1b	100	87.374	ENSIPUG00000010046	sar1b	100	87.374	Ictalurus_punctatus
ENSDARG00000103403	sar1b	100	96.970	ENSIPUG00000020925	sar1b	100	96.970	Ictalurus_punctatus
ENSDARG00000103403	sar1b	100	94.444	ENSKMAG00000019693	sar1b	100	94.444	Kryptolebias_marmoratus
ENSDARG00000103403	sar1b	100	84.848	ENSKMAG00000014875	-	100	84.848	Kryptolebias_marmoratus
ENSDARG00000103403	sar1b	100	90.404	ENSLBEG00000027550	sar1b	100	90.404	Labrus_bergylta
ENSDARG00000103403	sar1b	100	86.869	ENSLBEG00000016945	-	100	86.869	Labrus_bergylta
ENSDARG00000103403	sar1b	100	75.377	ENSLACG00000017029	-	100	75.377	Latimeria_chalumnae
ENSDARG00000103403	sar1b	100	87.879	ENSLACG00000010795	sar1b	100	87.879	Latimeria_chalumnae
ENSDARG00000103403	sar1b	100	92.424	ENSLOCG00000005214	-	100	92.424	Lepisosteus_oculatus
ENSDARG00000103403	sar1b	100	95.960	ENSLOCG00000010197	sar1b	100	95.960	Lepisosteus_oculatus
ENSDARG00000103403	sar1b	100	91.414	ENSMAMG00000021732	sar1b	100	91.414	Mastacembelus_armatus
ENSDARG00000103403	sar1b	100	94.444	ENSMZEG00005008942	sar1b	100	94.444	Maylandia_zebra
ENSDARG00000103403	sar1b	100	85.859	ENSMZEG00005001012	-	100	85.859	Maylandia_zebra
ENSDARG00000103403	sar1b	90	93.296	ENSMGAG00000005387	-	91	93.296	Meleagris_gallopavo
ENSDARG00000103403	sar1b	100	84.848	ENSMMOG00000013803	-	100	84.848	Mola_mola
ENSDARG00000103403	sar1b	100	94.444	ENSMALG00000016635	sar1b	97	92.857	Monopterus_albus
ENSDARG00000103403	sar1b	100	93.939	ENSNBRG00000008013	sar1b	100	93.939	Neolamprologus_brichardi
ENSDARG00000103403	sar1b	100	85.859	ENSNBRG00000014004	-	100	85.859	Neolamprologus_brichardi
ENSDARG00000103403	sar1b	100	94.949	ENSONIG00000017278	sar1b	100	94.949	Oreochromis_niloticus
ENSDARG00000103403	sar1b	100	92.929	ENSORLG00000000932	sar1b	100	92.929	Oryzias_latipes
ENSDARG00000103403	sar1b	100	92.929	ENSORLG00020021985	sar1b	100	92.929	Oryzias_latipes_hni
ENSDARG00000103403	sar1b	100	92.929	ENSORLG00015007044	sar1b	100	92.929	Oryzias_latipes_hsok
ENSDARG00000103403	sar1b	100	92.424	ENSOMEG00000001052	sar1b	100	92.424	Oryzias_melastigma
ENSDARG00000103403	sar1b	100	93.939	ENSPKIG00000010688	sar1b	100	93.939	Paramormyrops_kingsleyae
ENSDARG00000103403	sar1b	100	94.949	ENSPKIG00000017353	-	100	94.949	Paramormyrops_kingsleyae
ENSDARG00000103403	sar1b	59	94.828	ENSPMGG00000001234	sar1b	91	94.828	Periophthalmus_magnuspinnatus
ENSDARG00000103403	sar1b	100	86.070	ENSPMAG00000003593	sar1b	100	86.070	Petromyzon_marinus
ENSDARG00000103403	sar1b	100	92.424	ENSPFOG00000005666	sar1b	100	92.424	Poecilia_formosa
ENSDARG00000103403	sar1b	100	92.929	ENSPLAG00000012223	sar1b	100	92.929	Poecilia_latipinna
ENSDARG00000103403	sar1b	59	89.744	ENSPLAG00000001016	-	75	89.744	Poecilia_latipinna
ENSDARG00000103403	sar1b	100	92.424	ENSPMEG00000016831	sar1b	100	92.424	Poecilia_mexicana
ENSDARG00000103403	sar1b	60	88.983	ENSPREG00000002020	-	87	88.983	Poecilia_reticulata
ENSDARG00000103403	sar1b	100	92.424	ENSPREG00000005312	sar1b	90	92.424	Poecilia_reticulata
ENSDARG00000103403	sar1b	100	85.859	ENSPNYG00000021357	-	100	85.859	Pundamilia_nyererei
ENSDARG00000103403	sar1b	100	94.444	ENSPNYG00000012440	sar1b	100	94.444	Pundamilia_nyererei
ENSDARG00000103403	sar1b	100	98.990	ENSPNAG00000014683	sar1b	100	98.990	Pygocentrus_nattereri
ENSDARG00000103403	sar1b	100	88.384	ENSPNAG00000001123	-	100	88.384	Pygocentrus_nattereri
ENSDARG00000103403	sar1b	100	96.465	ENSSFOG00015020051	sar1b	100	96.465	Scleropages_formosus
ENSDARG00000103403	sar1b	100	94.444	ENSSFOG00015018128	-	100	94.444	Scleropages_formosus
ENSDARG00000103403	sar1b	100	91.919	ENSSMAG00000007106	sar1b	80	91.919	Scophthalmus_maximus
ENSDARG00000103403	sar1b	100	86.364	ENSSMAG00000002165	-	100	86.364	Scophthalmus_maximus
ENSDARG00000103403	sar1b	100	93.939	ENSSDUG00000020926	sar1b	100	93.939	Seriola_dumerili
ENSDARG00000103403	sar1b	100	85.859	ENSSDUG00000019629	-	100	85.859	Seriola_dumerili
ENSDARG00000103403	sar1b	100	85.859	ENSSLDG00000024197	-	100	85.859	Seriola_lalandi_dorsalis
ENSDARG00000103403	sar1b	100	93.939	ENSSLDG00000017052	sar1b	100	93.939	Seriola_lalandi_dorsalis
ENSDARG00000103403	sar1b	100	92.929	ENSSPUG00000010247	-	100	92.929	Sphenodon_punctatus
ENSDARG00000103403	sar1b	100	85.859	ENSSPAG00000015626	-	100	85.859	Stegastes_partitus
ENSDARG00000103403	sar1b	100	94.949	ENSSPAG00000017634	sar1b	100	94.949	Stegastes_partitus
ENSDARG00000103403	sar1b	100	88.384	ENSTRUG00000023908	sar1b	100	88.384	Takifugu_rubripes
ENSDARG00000103403	sar1b	100	88.889	ENSTNIG00000016097	sar1b	100	88.889	Tetraodon_nigroviridis
ENSDARG00000103403	sar1b	61	86.667	ENSXCOG00000006154	-	81	86.667	Xiphophorus_couchianus
ENSDARG00000103403	sar1b	90	93.258	ENSXCOG00000004160	sar1b	87	93.258	Xiphophorus_couchianus
ENSDARG00000103403	sar1b	100	92.929	ENSXMAG00000008294	sar1b	100	92.929	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003400	regulation of COPII vesicle coating	21873635.	IBA	Process
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0005794	Golgi apparatus	-	IEA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006886	intracellular protein transport	-	IEA	Process
GO:0006888	ER to Golgi vesicle-mediated transport	21873635.	IBA	Process
GO:0007417	central nervous system development	25559265.	IMP	Process
GO:0015031	protein transport	-	IEA	Process
GO:0016050	vesicle organization	21873635.	IBA	Process
GO:0016192	vesicle-mediated transport	-	IEA	Process
GO:0030127	COPII vesicle coat	21873635.	IBA	Component
GO:0030299	intestinal cholesterol absorption	25559265.	IMP	Process
GO:0035265	organ growth	25559265.	IMP	Process
GO:0048703	embryonic viscerocranium morphogenesis	25559265.	IMP	Process
GO:0061024	membrane organization	21873635.	IBA	Process
GO:0070863	positive regulation of protein exit from endoplasmic reticulum	21873635.	IBA	Process
GO:0070971	endoplasmic reticulum exit site	21873635.	IBA	Component