EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000103436 (Gene tree)
Gene ID: -
Gene Symbol: BX548028.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5322 bases
Position: chr12:7865470-7870791
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000135182	RVT_1	PF00078.27	9.9e-48	1	1
ENSDARP00000135182	RNase_H	PF00075.24	1.5e-14	1	1
ENSDARP00000135182	Exo_endo_phos	PF03372.23	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000161683	BX548028.1-201	5322	-	ENSDARP00000135182	1258 (aa)	-	A0A0G2KS01

Gene Model

Click here to download ENSDARG00000103436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000103436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000103436	BX548028.1	99	49.641	ENSDARG00000099201	BX908731.1	100	49.641
ENSDARG00000103436	BX548028.1	99	49.402	ENSDARG00000103037	CR848788.1	100	49.402

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000103436	BX548028.1	99	49.602	ENSAMXG00000043500	-	100	49.602	Astyanax_mexicanus
ENSDARG00000103436	BX548028.1	99	47.087	ENSKMAG00000003982	-	100	47.087	Kryptolebias_marmoratus
ENSDARG00000103436	BX548028.1	67	49.227	ENSKMAG00000012711	-	99	49.227	Kryptolebias_marmoratus
ENSDARG00000103436	BX548028.1	64	51.355	ENSKMAG00000021014	-	100	51.355	Kryptolebias_marmoratus
ENSDARG00000103436	BX548028.1	99	47.087	ENSKMAG00000004415	-	100	47.087	Kryptolebias_marmoratus
ENSDARG00000103436	BX548028.1	99	45.115	ENSORLG00000027174	-	100	45.115	Oryzias_latipes
ENSDARG00000103436	BX548028.1	99	45.115	ENSORLG00000023592	-	100	45.115	Oryzias_latipes
ENSDARG00000103436	BX548028.1	99	45.036	ENSORLG00000026314	-	100	45.036	Oryzias_latipes
ENSDARG00000103436	BX548028.1	99	44.877	ENSORLG00000024423	-	100	44.877	Oryzias_latipes
ENSDARG00000103436	BX548028.1	99	45.433	ENSORLG00020011427	-	100	45.433	Oryzias_latipes_hni
ENSDARG00000103436	BX548028.1	71	45.434	ENSORLG00020019901	-	100	45.434	Oryzias_latipes_hni
ENSDARG00000103436	BX548028.1	99	45.261	ENSORLG00020020238	-	100	45.261	Oryzias_latipes_hni
ENSDARG00000103436	BX548028.1	99	45.433	ENSORLG00020018543	-	100	45.433	Oryzias_latipes_hni
ENSDARG00000103436	BX548028.1	87	46.545	ENSORLG00015013792	-	99	46.545	Oryzias_latipes_hsok
ENSDARG00000103436	BX548028.1	85	46.505	ENSOMEG00000003836	-	98	46.505	Oryzias_melastigma
ENSDARG00000103436	BX548028.1	99	46.905	ENSPKIG00000019189	-	99	46.905	Paramormyrops_kingsleyae
ENSDARG00000103436	BX548028.1	90	46.270	ENSXMAG00000026248	-	99	46.270	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	99	48.724	ENSXMAG00000021070	-	100	48.724	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	71	47.924	ENSXMAG00000024143	-	100	47.924	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	99	48.485	ENSXMAG00000028309	-	100	48.485	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	81	44.531	ENSXMAG00000029923	-	99	44.531	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	81	44.727	ENSXMAG00000023078	-	99	44.727	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	60	46.003	ENSXMAG00000025430	-	99	46.003	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	90	46.270	ENSXMAG00000022223	-	99	46.270	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	92	47.672	ENSXMAG00000029466	-	100	47.672	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	81	45.224	ENSXMAG00000027130	-	99	45.224	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	99	48.724	ENSXMAG00000021755	-	100	48.724	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	99	48.361	ENSXMAG00000021061	-	100	48.361	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	63	49.241	ENSXMAG00000023377	-	100	49.241	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	90	46.270	ENSXMAG00000026588	-	99	46.270	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	64	48.939	ENSXMAG00000023126	-	99	48.939	Xiphophorus_maculatus
ENSDARG00000103436	BX548028.1	68	47.418	ENSXMAG00000020874	-	94	47.418	Xiphophorus_maculatus