EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000103721 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-122c11.7
Alias: -
Full Name: si:dkey-122c11.7
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 36520 bases
Position: chr4:57380165-57416684
Accession: ZDB-GENE-110913-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000135074	zf-C2H2	PF00096.26	2.8e-45	1	7
ENSDARP00000135074	zf-C2H2	PF00096.26	2.8e-45	2	7
ENSDARP00000135074	zf-C2H2	PF00096.26	2.8e-45	3	7
ENSDARP00000135074	zf-C2H2	PF00096.26	2.8e-45	4	7
ENSDARP00000135074	zf-C2H2	PF00096.26	2.8e-45	5	7
ENSDARP00000135074	zf-C2H2	PF00096.26	2.8e-45	6	7
ENSDARP00000135074	zf-C2H2	PF00096.26	2.8e-45	7	7
ENSDARP00000135074	zf-met	PF12874.7	0.00064	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000169434	-	1242	-	ENSDARP00000135074	320 (aa)	-	A0A0R4IK38

Gene Model

Click here to download ENSDARG00000103721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000103721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000103721	si:dkey-122c11.7	99	88.785	ENSDARG00000102561	AL645691.1	97	88.785
ENSDARG00000103721	si:dkey-122c11.7	99	66.534	ENSDARG00000104074	znf1052	99	66.534
ENSDARG00000103721	si:dkey-122c11.7	99	68.400	ENSDARG00000098071	znf1049	99	68.400
ENSDARG00000103721	si:dkey-122c11.7	100	65.339	ENSDARG00000088000	znf1057	99	65.339
ENSDARG00000103721	si:dkey-122c11.7	100	70.031	ENSDARG00000098087	si:dkey-30f3.2	99	70.031
ENSDARG00000103721	si:dkey-122c11.7	91	62.691	ENSDARG00000103495	zgc:173714	99	62.691
ENSDARG00000103721	si:dkey-122c11.7	99	60.422	ENSDARG00000110229	zgc:173702	99	62.769
ENSDARG00000103721	si:dkey-122c11.7	100	70.986	ENSDARG00000115450	CABZ01012382.1	99	69.859
ENSDARG00000103721	si:dkey-122c11.7	99	68.127	ENSDARG00000103310	znf1053	99	68.127
ENSDARG00000103721	si:dkey-122c11.7	99	59.631	ENSDARG00000105306	si:dkeyp-44b5.5	99	63.385
ENSDARG00000103721	si:dkey-122c11.7	91	58.873	ENSDARG00000116920	BX465848.2	90	62.752
ENSDARG00000103721	si:dkey-122c11.7	99	61.161	ENSDARG00000102837	znf1145	100	61.842
ENSDARG00000103721	si:dkey-122c11.7	99	45.625	ENSDARG00000101365	si:cabz01021430.2	100	49.153
ENSDARG00000103721	si:dkey-122c11.7	99	63.953	ENSDARG00000100509	si:dkey-82i20.2	100	63.953
ENSDARG00000103721	si:dkey-122c11.7	100	91.562	ENSDARG00000112103	si:dkey-16p19.1	100	91.562
ENSDARG00000103721	si:dkey-122c11.7	99	63.687	ENSDARG00000115655	znf1078	99	62.570
ENSDARG00000103721	si:dkey-122c11.7	99	68.127	ENSDARG00000101137	znf999	97	74.510
ENSDARG00000103721	si:dkey-122c11.7	99	45.045	ENSDARG00000089715	si:cabz01054394.7	94	45.045
ENSDARG00000103721	si:dkey-122c11.7	99	70.141	ENSDARG00000105137	zgc:173705	99	69.014
ENSDARG00000103721	si:dkey-122c11.7	99	66.534	ENSDARG00000098270	znf1053	99	66.534
ENSDARG00000103721	si:dkey-122c11.7	99	64.525	ENSDARG00000098196	znf1077	99	64.246
ENSDARG00000103721	si:dkey-122c11.7	99	59.367	ENSDARG00000094558	si:dkeyp-53e4.1	99	57.670
ENSDARG00000103721	si:dkey-122c11.7	100	90.093	ENSDARG00000102008	si:dkey-72l17.6	100	90.093
ENSDARG00000103721	si:dkey-122c11.7	100	71.831	ENSDARG00000109381	CU457778.2	99	70.704
ENSDARG00000103721	si:dkey-122c11.7	99	57.933	ENSDARG00000092938	znf1047	99	66.534
ENSDARG00000103721	si:dkey-122c11.7	99	49.032	ENSDARG00000105692	CABZ01069022.1	99	48.193
ENSDARG00000103721	si:dkey-122c11.7	99	57.933	ENSDARG00000091994	znf1048	99	66.932
ENSDARG00000103721	si:dkey-122c11.7	99	90.783	ENSDARG00000111550	CABZ01002702.1	99	90.783
ENSDARG00000103721	si:dkey-122c11.7	99	65.278	ENSDARG00000116216	znf1046	99	66.932
ENSDARG00000103721	si:dkey-122c11.7	100	70.948	ENSDARG00000102791	zgc:174704	99	70.948
ENSDARG00000103721	si:dkey-122c11.7	99	59.631	ENSDARG00000090160	zgc:173709	99	62.462
ENSDARG00000103721	si:dkey-122c11.7	99	63.824	ENSDARG00000100961	zgc:174653	92	64.848
ENSDARG00000103721	si:dkey-122c11.7	100	70.704	ENSDARG00000112725	si:dkey-22h13.2	99	69.014
ENSDARG00000103721	si:dkey-122c11.7	99	58.654	ENSDARG00000102600	CABZ01003344.1	99	67.331
ENSDARG00000103721	si:dkey-122c11.7	99	66.197	ENSDARG00000114437	zgc:173705	99	66.197
ENSDARG00000103721	si:dkey-122c11.7	99	67.331	ENSDARG00000098986	znf1040	99	67.331
ENSDARG00000103721	si:dkey-122c11.7	100	70.423	ENSDARG00000100001	znf1096	99	69.296
ENSDARG00000103721	si:dkey-122c11.7	86	94.909	ENSDARG00000100653	si:dkeyp-82b4.6	98	94.909
ENSDARG00000103721	si:dkey-122c11.7	99	68.127	ENSDARG00000096210	znf1050	99	68.127
ENSDARG00000103721	si:dkey-122c11.7	100	63.347	ENSDARG00000086449	znf1055	99	63.347
ENSDARG00000103721	si:dkey-122c11.7	99	58.839	ENSDARG00000102673	si:dkey-26i24.1	99	62.154
ENSDARG00000103721	si:dkey-122c11.7	99	57.520	ENSDARG00000100842	si:ch211-223a21.4	99	57.102
ENSDARG00000103721	si:dkey-122c11.7	99	59.631	ENSDARG00000103471	si:dkey-199m13.4	98	62.462
ENSDARG00000103721	si:dkey-122c11.7	99	66.265	ENSDARG00000093994	znf1058	100	66.265
ENSDARG00000103721	si:dkey-122c11.7	100	69.113	ENSDARG00000110658	zgc:174696	99	69.113
ENSDARG00000103721	si:dkey-122c11.7	99	42.745	ENSDARG00000074298	znf1015	100	44.091
ENSDARG00000103721	si:dkey-122c11.7	99	56.621	ENSDARG00000091477	znf1066	100	62.000
ENSDARG00000103721	si:dkey-122c11.7	99	45.897	ENSDARG00000096828	si:ch73-144d13.7	98	47.126
ENSDARG00000103721	si:dkey-122c11.7	99	64.804	ENSDARG00000114947	BX465848.1	99	64.525
ENSDARG00000103721	si:dkey-122c11.7	76	70.098	ENSDARG00000112606	BX248128.2	98	70.098
ENSDARG00000103721	si:dkey-122c11.7	99	59.367	ENSDARG00000103636	zgc:173702	99	61.846
ENSDARG00000103721	si:dkey-122c11.7	99	63.128	ENSDARG00000101327	znf1076	99	62.291
ENSDARG00000103721	si:dkey-122c11.7	99	69.323	ENSDARG00000089814	znf1042	99	69.323
ENSDARG00000103721	si:dkey-122c11.7	100	66.135	ENSDARG00000105067	znf1043	99	66.135
ENSDARG00000103721	si:dkey-122c11.7	99	48.083	ENSDARG00000074365	zgc:171901	100	51.961
ENSDARG00000103721	si:dkey-122c11.7	99	63.966	ENSDARG00000099736	CABZ01075078.1	99	63.408
ENSDARG00000103721	si:dkey-122c11.7	90	61.932	ENSDARG00000116177	znf1127	92	63.729
ENSDARG00000103721	si:dkey-122c11.7	100	69.859	ENSDARG00000096189	si:dkey-54j5.2	99	69.859
ENSDARG00000103721	si:dkey-122c11.7	99	58.575	ENSDARG00000096041	si:ch211-162i8.2	99	57.955
ENSDARG00000103721	si:dkey-122c11.7	100	90.402	ENSDARG00000113808	si:dkeyp-82b4.6	96	90.402
ENSDARG00000103721	si:dkey-122c11.7	99	90.596	ENSDARG00000114793	CU182823.4	98	90.596
ENSDARG00000103721	si:dkey-122c11.7	99	57.632	ENSDARG00000098901	CABZ01002768.1	100	58.410
ENSDARG00000103721	si:dkey-122c11.7	99	60.567	ENSDARG00000104407	BX649453.1	99	62.550
ENSDARG00000103721	si:dkey-122c11.7	99	64.535	ENSDARG00000098536	si:dkey-25i10.1	100	64.535
ENSDARG00000103721	si:dkey-122c11.7	99	65.084	ENSDARG00000098430	znf1078	99	63.687
ENSDARG00000103721	si:dkey-122c11.7	99	72.112	ENSDARG00000076272	znf1041	99	72.112
ENSDARG00000103721	si:dkey-122c11.7	90	62.500	ENSDARG00000095605	CR846087.3	99	61.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000103721	si:dkey-122c11.7	76	37.908	ENSGAFG00000013839	-	51	37.908	Gambusia_affinis
ENSDARG00000103721	si:dkey-122c11.7	81	40.157	ENSOMEG00000005928	-	53	33.758	Oryzias_melastigma
ENSDARG00000103721	si:dkey-122c11.7	78	45.882	ENSPFOG00000005998	-	51	45.882	Poecilia_formosa
ENSDARG00000103721	si:dkey-122c11.7	89	47.619	ENSPREG00000005015	-	54	51.299	Poecilia_reticulata
ENSDARG00000103721	si:dkey-122c11.7	69	40.260	ENSSDUG00000015456	-	50	32.661	Seriola_dumerili