EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000103725 (Gene tree)
Gene ID: 100136854
Gene Symbol: znf341
Alias: zgc:171837
Full Name: zinc finger protein 341
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 30561 bases
Position: chr23:43489182-43519742
Accession: ZDB-GENE-080204-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000155151	zf-C2H2	PF00096.26	1.9e-33	1	6
ENSDARP00000155151	zf-C2H2	PF00096.26	1.9e-33	2	6
ENSDARP00000155151	zf-C2H2	PF00096.26	1.9e-33	3	6
ENSDARP00000155151	zf-C2H2	PF00096.26	1.9e-33	4	6
ENSDARP00000155151	zf-C2H2	PF00096.26	1.9e-33	5	6
ENSDARP00000155151	zf-C2H2	PF00096.26	1.9e-33	6	6
ENSDARP00000136706	zf-C2H2	PF00096.26	2.3e-33	1	5
ENSDARP00000136706	zf-C2H2	PF00096.26	2.3e-33	2	5
ENSDARP00000136706	zf-C2H2	PF00096.26	2.3e-33	3	5
ENSDARP00000136706	zf-C2H2	PF00096.26	2.3e-33	4	5
ENSDARP00000136706	zf-C2H2	PF00096.26	2.3e-33	5	5
ENSDARP00000155151	zf-met	PF12874.7	2.4e-05	1	1
ENSDARP00000136706	zf-met	PF12874.7	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000162062	-	2596	XM_005174532	ENSDARP00000136706	796 (aa)	XP_005174589	A0A0R4IQE7
ENSDART00000191441	-	3340	-	ENSDARP00000155151	785 (aa)	-	A0A2R8QQF1

Gene Model

Click here to download ENSDARG00000103725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000103725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000103725	znf341	97	64.490	ENSAPOG00000016509	znf341	95	61.486	Acanthochromis_polyacanthus
ENSDARG00000103725	znf341	96	66.197	ENSACIG00000016180	znf341	94	62.500	Amphilophus_citrinellus
ENSDARG00000103725	znf341	97	64.114	ENSAOCG00000000960	znf341	92	62.415	Amphiprion_ocellaris
ENSDARG00000103725	znf341	96	68.153	ENSAPEG00000006358	znf341	93	67.380	Amphiprion_percula
ENSDARG00000103725	znf341	96	64.658	ENSATEG00000003196	znf341	85	68.308	Anabas_testudineus
ENSDARG00000103725	znf341	89	68.561	ENSACLG00000014349	znf341	60	69.273	Astatotilapia_calliptera
ENSDARG00000103725	znf341	88	78.230	ENSAMXG00000016921	znf341	99	71.195	Astyanax_mexicanus
ENSDARG00000103725	znf341	96	68.200	ENSCSEG00000003536	znf341	97	66.452	Cynoglossus_semilaevis
ENSDARG00000103725	znf341	95	63.615	ENSCVAG00000016325	znf341	91	65.952	Cyprinodon_variegatus
ENSDARG00000103725	znf341	93	73.067	ENSELUG00000018438	znf341	92	74.631	Esox_lucius
ENSDARG00000103725	znf341	89	67.043	ENSFHEG00000009763	znf341	99	64.928	Fundulus_heteroclitus
ENSDARG00000103725	znf341	88	67.812	ENSGAFG00000020131	znf341	89	62.639	Gambusia_affinis
ENSDARG00000103725	znf341	92	72.289	ENSHCOG00000004879	znf341	88	73.846	Hippocampus_comes
ENSDARG00000103725	znf341	99	70.147	ENSIPUG00000002075	znf341	99	70.668	Ictalurus_punctatus
ENSDARG00000103725	znf341	97	62.989	ENSKMAG00000006686	znf341	90	62.123	Kryptolebias_marmoratus
ENSDARG00000103725	znf341	89	68.369	ENSLBEG00000016666	znf341	89	67.312	Labrus_bergylta
ENSDARG00000103725	znf341	100	67.629	ENSLOCG00000000947	znf341	100	67.629	Lepisosteus_oculatus
ENSDARG00000103725	znf341	89	68.956	ENSMAMG00000008000	znf341	75	83.815	Mastacembelus_armatus
ENSDARG00000103725	znf341	89	68.561	ENSMZEG00005021851	znf341	60	69.273	Maylandia_zebra
ENSDARG00000103725	znf341	97	68.597	ENSMMOG00000019626	znf341	92	72.067	Mola_mola
ENSDARG00000103725	znf341	90	60.956	ENSMODG00000002856	ZNF341	88	60.345	Monodelphis_domestica
ENSDARG00000103725	znf341	89	70.267	ENSMALG00000006492	znf341	96	69.632	Monopterus_albus
ENSDARG00000103725	znf341	98	63.799	ENSNBRG00000019550	znf341	58	71.098	Neolamprologus_brichardi
ENSDARG00000103725	znf341	99	68.970	ENSONIG00000009210	znf341	99	68.364	Oreochromis_niloticus
ENSDARG00000103725	znf341	96	64.504	ENSORLG00000000956	znf341	87	69.931	Oryzias_latipes
ENSDARG00000103725	znf341	93	68.702	ENSORLG00020004162	znf341	89	63.763	Oryzias_latipes_hni
ENSDARG00000103725	znf341	96	64.578	ENSORLG00015018360	znf341	87	69.751	Oryzias_latipes_hsok
ENSDARG00000103725	znf341	99	61.547	ENSOMEG00000014403	znf341	91	65.929	Oryzias_melastigma
ENSDARG00000103725	znf341	100	68.039	ENSPKIG00000023946	znf341	87	73.721	Paramormyrops_kingsleyae
ENSDARG00000103725	znf341	98	63.827	ENSPMGG00000014849	znf341	90	67.711	Periophthalmus_magnuspinnatus
ENSDARG00000103725	znf341	96	68.176	ENSPFOG00000013875	znf341	95	69.312	Poecilia_formosa
ENSDARG00000103725	znf341	96	63.364	ENSPLAG00000014192	znf341	89	61.671	Poecilia_latipinna
ENSDARG00000103725	znf341	96	62.644	ENSPMEG00000020155	znf341	62	65.331	Poecilia_mexicana
ENSDARG00000103725	znf341	92	66.462	ENSPREG00000001388	znf341	88	65.704	Poecilia_reticulata
ENSDARG00000103725	znf341	89	73.677	ENSPNYG00000015106	znf341	87	73.114	Pundamilia_nyererei
ENSDARG00000103725	znf341	91	75.895	ENSPNAG00000027229	znf341	98	71.811	Pygocentrus_nattereri
ENSDARG00000103725	znf341	89	72.928	ENSSFOG00015014678	znf341	95	66.996	Scleropages_formosus
ENSDARG00000103725	znf341	96	82.759	ENSSMAG00000006473	znf341	77	82.659	Scophthalmus_maximus
ENSDARG00000103725	znf341	96	68.869	ENSSDUG00000014540	znf341	92	67.419	Seriola_dumerili
ENSDARG00000103725	znf341	96	69.250	ENSSLDG00000019660	znf341	92	67.794	Seriola_lalandi_dorsalis
ENSDARG00000103725	znf341	96	61.598	ENSTRUG00000011385	znf341	80	82.659	Takifugu_rubripes
ENSDARG00000103725	znf341	88	71.585	ENSTNIG00000005051	znf341	100	69.565	Tetraodon_nigroviridis
ENSDARG00000103725	znf341	79	70.330	ENSXCOG00000000036	znf341	94	67.776	Xiphophorus_couchianus
ENSDARG00000103725	znf341	99	62.444	ENSXMAG00000014133	znf341	61	66.844	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function