EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000103875 (Gene tree)
Gene ID: -
Gene Symbol: CABZ01048402.2
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 12733 bases
Position: chrKN149946.1:21-12753
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000139355	zf-C2H2	PF00096.26	4.4e-30	1	5
ENSDARP00000139355	zf-C2H2	PF00096.26	4.4e-30	2	5
ENSDARP00000139355	zf-C2H2	PF00096.26	4.4e-30	3	5
ENSDARP00000139355	zf-C2H2	PF00096.26	4.4e-30	4	5
ENSDARP00000139355	zf-C2H2	PF00096.26	4.4e-30	5	5
ENSDARP00000139355	zf-C2H2_jaz	PF12171.8	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000163016	CABZ01048402.2-201	3298	-	ENSDARP00000139355	292 (aa)	-	A0A0G2L3M9

Gene Model

Click here to download ENSDARG00000103875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000103875's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000103875	CABZ01048402.2	96	60.000	ENSDARG00000106724	CU655961.3	92	60.000
ENSDARG00000103875	CABZ01048402.2	98	48.182	ENSDARG00000100587	zgc:113886	99	56.977
ENSDARG00000103875	CABZ01048402.2	99	48.750	ENSDARG00000094736	znf1157	93	60.784
ENSDARG00000103875	CABZ01048402.2	82	44.314	ENSDARG00000099618	si:dkey-1b17.6	88	58.108
ENSDARG00000103875	CABZ01048402.2	98	61.458	ENSDARG00000105073	CU655961.2	94	61.993
ENSDARG00000103875	CABZ01048402.2	93	53.478	ENSDARG00000102282	CABZ01063298.1	93	53.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000103875	CABZ01048402.2	81	52.542	ENSAPOG00000022086	-	98	55.422	Acanthochromis_polyacanthus
ENSDARG00000103875	CABZ01048402.2	81	51.485	ENSACIG00000015835	-	68	51.485	Amphilophus_citrinellus
ENSDARG00000103875	CABZ01048402.2	97	50.000	ENSAPEG00000007389	-	93	44.595	Amphiprion_percula
ENSDARG00000103875	CABZ01048402.2	83	42.391	ENSACLG00000011710	-	68	42.391	Astatotilapia_calliptera
ENSDARG00000103875	CABZ01048402.2	84	48.876	ENSAMXG00000031307	-	63	45.411	Astyanax_mexicanus
ENSDARG00000103875	CABZ01048402.2	82	46.154	ENSEBUG00000011896	-	52	37.037	Eptatretus_burgeri
ENSDARG00000103875	CABZ01048402.2	76	46.914	ENSKMAG00000009522	-	75	37.374	Kryptolebias_marmoratus
ENSDARG00000103875	CABZ01048402.2	99	46.154	ENSPNYG00000017141	-	76	48.438	Pundamilia_nyererei
ENSDARG00000103875	CABZ01048402.2	82	56.250	ENSSMAG00000009679	-	77	56.250	Scophthalmus_maximus
ENSDARG00000103875	CABZ01048402.2	85	50.000	ENSSPAG00000008610	-	86	50.000	Stegastes_partitus