EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000104105 (Gene tree)
Gene ID: 555382
Gene Symbol: ttf2
Alias: si:ch1073-303l5.1
Full Name: transcription termination factor%2C RNA polymerase II
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 22972 bases
Position: chr9:9927516-9950487
Accession: ZDB-GENE-110411-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000133119	ResIII	PF04851.15	1.7e-08	1	1
ENSDARP00000137054	ResIII	PF04851.15	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000161089	-	4070	XM_005168619	ENSDARP00000133119	1145 (aa)	XP_005168676	A0A0R4IFG3
ENSDART00000168559	-	3069	-	ENSDARP00000137054	993 (aa)	-	A0A0R4IT52
ENSDART00000171697	-	655	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000104105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000104105's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000104105	ttf2	100	62.659	ENSAPOG00000016882	ttf2	100	63.167	Acanthochromis_polyacanthus
ENSDARG00000104105	ttf2	100	60.873	ENSACIG00000005837	ttf2	100	61.334	Amphilophus_citrinellus
ENSDARG00000104105	ttf2	100	63.328	ENSAOCG00000001866	ttf2	100	63.497	Amphiprion_ocellaris
ENSDARG00000104105	ttf2	100	63.381	ENSAPEG00000022425	ttf2	100	63.636	Amphiprion_percula
ENSDARG00000104105	ttf2	100	62.575	ENSATEG00000002050	ttf2	100	62.575	Anabas_testudineus
ENSDARG00000104105	ttf2	67	62.452	ENSACAG00000010769	-	100	49.250	Anolis_carolinensis
ENSDARG00000104105	ttf2	100	60.806	ENSACLG00000018148	ttf2	100	61.321	Astatotilapia_calliptera
ENSDARG00000104105	ttf2	97	67.333	ENSAMXG00000016683	ttf2	97	67.857	Astyanax_mexicanus
ENSDARG00000104105	ttf2	100	48.889	ENSCJAG00000005909	-	100	48.889	Callithrix_jacchus
ENSDARG00000104105	ttf2	100	52.428	ENSCPBG00000020902	-	97	52.346	Chrysemys_picta_bellii
ENSDARG00000104105	ttf2	100	49.657	ENSCGRG00001006277	-	100	49.656	Cricetulus_griseus_chok1gshd
ENSDARG00000104105	ttf2	100	49.485	ENSCGRG00000017781	-	100	49.485	Cricetulus_griseus_crigri
ENSDARG00000104105	ttf2	100	62.084	ENSCSEG00000008842	ttf2	100	61.913	Cynoglossus_semilaevis
ENSDARG00000104105	ttf2	99	59.723	ENSCVAG00000000795	ttf2	100	59.378	Cyprinodon_variegatus
ENSDARG00000104105	ttf2	100	47.647	ENSEASG00005006374	-	100	47.647	Equus_asinus_asinus
ENSDARG00000104105	ttf2	100	49.872	ENSFDAG00000019681	-	100	49.787	Fukomys_damarensis
ENSDARG00000104105	ttf2	100	58.177	ENSFHEG00000014849	ttf2	100	58.206	Fundulus_heteroclitus
ENSDARG00000104105	ttf2	100	56.158	ENSGMOG00000015604	ttf2	100	56.110	Gadus_morhua
ENSDARG00000104105	ttf2	100	59.345	ENSGACG00000001351	ttf2	100	59.897	Gasterosteus_aculeatus
ENSDARG00000104105	ttf2	99	51.812	ENSGAGG00000001126	-	99	51.730	Gopherus_agassizii
ENSDARG00000104105	ttf2	99	60.799	ENSHBUG00000003595	ttf2	99	61.395	Haplochromis_burtoni
ENSDARG00000104105	ttf2	88	66.295	ENSHCOG00000018006	ttf2	97	65.923	Hippocampus_comes
ENSDARG00000104105	ttf2	100	69.362	ENSIPUG00000003123	ttf2	100	69.447	Ictalurus_punctatus
ENSDARG00000104105	ttf2	100	58.818	ENSKMAG00000013535	ttf2	100	59.231	Kryptolebias_marmoratus
ENSDARG00000104105	ttf2	100	61.888	ENSMAMG00000020428	ttf2	100	62.833	Mastacembelus_armatus
ENSDARG00000104105	ttf2	100	60.422	ENSMZEG00005019186	ttf2	100	61.493	Maylandia_zebra
ENSDARG00000104105	ttf2	100	50.043	ENSMAUG00000016725	-	100	49.957	Mesocricetus_auratus
ENSDARG00000104105	ttf2	100	59.415	ENSMMOG00000019490	ttf2	100	60.120	Mola_mola
ENSDARG00000104105	ttf2	100	60.672	ENSONIG00000015742	ttf2	100	61.577	Oreochromis_niloticus
ENSDARG00000104105	ttf2	100	59.266	ENSORLG00020009694	ttf2	100	59.693	Oryzias_latipes_hni
ENSDARG00000104105	ttf2	100	59.234	ENSORLG00015012909	ttf2	100	59.574	Oryzias_latipes_hsok
ENSDARG00000104105	ttf2	99	58.134	ENSOMEG00000009786	ttf2	100	58.390	Oryzias_melastigma
ENSDARG00000104105	ttf2	93	56.645	ENSPMGG00000018367	ttf2	98	56.422	Periophthalmus_magnuspinnatus
ENSDARG00000104105	ttf2	100	61.420	ENSPFOG00000006601	ttf2	100	61.506	Poecilia_formosa
ENSDARG00000104105	ttf2	100	60.650	ENSPLAG00000006236	ttf2	100	60.803	Poecilia_latipinna
ENSDARG00000104105	ttf2	100	61.334	ENSPMEG00000022477	ttf2	100	61.506	Poecilia_mexicana
ENSDARG00000104105	ttf2	100	60.609	ENSPNYG00000006961	ttf2	100	60.924	Pundamilia_nyererei
ENSDARG00000104105	ttf2	100	68.372	ENSPNAG00000018988	ttf2	99	68.372	Pygocentrus_nattereri
ENSDARG00000104105	ttf2	100	62.554	ENSSLDG00000019476	ttf2	100	62.918	Seriola_lalandi_dorsalis
ENSDARG00000104105	ttf2	100	63.246	ENSSPAG00000002204	ttf2	100	63.109	Stegastes_partitus
ENSDARG00000104105	ttf2	99	59.725	ENSXCOG00000018307	ttf2	99	60.327	Xiphophorus_couchianus
ENSDARG00000104105	ttf2	100	59.747	ENSXMAG00000014772	ttf2	100	59.916	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005524	ATP binding	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function