EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000104173 (Gene tree)
Gene ID: 541378
Gene Symbol: tufm
Alias: fi06f04|wu:fi06f04|zgc:110766
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 17464 bases
Position: chr3:13582019-13599482
Accession: ZDB-GENE-050320-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000134914	GTP_EFTU	PF00009.27	4.2e-54	1	1
ENSDARP00000134914	GTP_EFTU_D2	PF03144.25	1.4e-14	1	1
ENSDARP00000134914	GTP_EFTU_D3	PF03143.17	9.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000166639	-	1784	-	ENSDARP00000134914	448 (aa)	-	Q5BJ17

Gene Model

Click here to download ENSDARG00000104173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000104173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000104173	tufm	92	75.971	ENSG00000178952	TUFM	99	72.124	Homo_sapiens
ENSDARG00000104173	tufm	99	84.081	ENSAPOG00000013385	tufm	100	84.081	Acanthochromis_polyacanthus
ENSDARG00000104173	tufm	94	76.010	ENSAMEG00000015551	TUFM	93	76.010	Ailuropoda_melanoleuca
ENSDARG00000104173	tufm	97	81.293	ENSACIG00000007388	tufm	99	81.293	Amphilophus_citrinellus
ENSDARG00000104173	tufm	99	84.081	ENSAOCG00000001032	tufm	100	84.081	Amphiprion_ocellaris
ENSDARG00000104173	tufm	99	84.081	ENSAPEG00000015751	tufm	100	84.081	Amphiprion_percula
ENSDARG00000104173	tufm	99	82.063	ENSATEG00000002905	tufm	97	82.063	Anabas_testudineus
ENSDARG00000104173	tufm	99	74.777	ENSACAG00000005399	TUFM	97	74.777	Anolis_carolinensis
ENSDARG00000104173	tufm	99	71.588	ENSANAG00000022206	TUFM	98	71.588	Aotus_nancymaae
ENSDARG00000104173	tufm	99	84.305	ENSACLG00000007403	tufm	93	84.305	Astatotilapia_calliptera
ENSDARG00000104173	tufm	99	72.931	ENSBTAG00000019216	TUFM	99	72.931	Bos_taurus
ENSDARG00000104173	tufm	90	57.073	WBGene00007000	tufm-1	82	57.073	Caenorhabditis_elegans
ENSDARG00000104173	tufm	99	71.812	ENSCJAG00000006236	TUFM	98	71.812	Callithrix_jacchus
ENSDARG00000104173	tufm	99	73.378	ENSCAFG00000017216	TUFM	99	73.378	Canis_familiaris
ENSDARG00000104173	tufm	99	73.378	ENSCAFG00020017574	TUFM	99	73.378	Canis_lupus_dingo
ENSDARG00000104173	tufm	99	73.154	ENSCHIG00000020583	TUFM	99	73.154	Capra_hircus
ENSDARG00000104173	tufm	99	73.009	ENSTSYG00000026053	TUFM	99	73.009	Carlito_syrichta
ENSDARG00000104173	tufm	99	73.378	ENSCPOG00000010534	TUFM	99	73.378	Cavia_porcellus
ENSDARG00000104173	tufm	99	72.036	ENSCCAG00000033296	TUFM	98	72.036	Cebus_capucinus
ENSDARG00000104173	tufm	99	72.931	ENSCATG00000035822	TUFM	98	72.931	Cercocebus_atys
ENSDARG00000104173	tufm	99	73.154	ENSCLAG00000013969	TUFM	99	73.154	Chinchilla_lanigera
ENSDARG00000104173	tufm	94	75.059	ENSCSAG00000006314	TUFM	93	75.059	Chlorocebus_sabaeus
ENSDARG00000104173	tufm	99	72.566	ENSCHOG00000009077	TUFM	99	72.566	Choloepus_hoffmanni
ENSDARG00000104173	tufm	98	75.901	ENSCPBG00000003874	TUFM	96	75.901	Chrysemys_picta_bellii
ENSDARG00000104173	tufm	90	59.406	ENSCING00000002841	-	94	59.406	Ciona_intestinalis
ENSDARG00000104173	tufm	91	58.088	ENSCSAVG00000009380	-	88	58.088	Ciona_savignyi
ENSDARG00000104173	tufm	99	71.397	ENSCANG00000035829	TUFM	99	71.397	Colobus_angolensis_palliatus
ENSDARG00000104173	tufm	99	72.260	ENSCGRG00001022949	Tufm	99	72.260	Cricetulus_griseus_chok1gshd
ENSDARG00000104173	tufm	92	53.012	ENSCGRG00000013193	-	91	53.012	Cricetulus_griseus_crigri
ENSDARG00000104173	tufm	99	72.260	ENSCGRG00000001868	-	99	72.260	Cricetulus_griseus_crigri
ENSDARG00000104173	tufm	99	82.511	ENSCSEG00000013841	tufm	100	82.511	Cynoglossus_semilaevis
ENSDARG00000104173	tufm	99	85.202	ENSCVAG00000006251	tufm	100	85.202	Cyprinodon_variegatus
ENSDARG00000104173	tufm	99	71.239	ENSDNOG00000047636	TUFM	99	71.239	Dasypus_novemcinctus
ENSDARG00000104173	tufm	94	61.374	ENSDORG00000023544	-	99	61.374	Dipodomys_ordii
ENSDARG00000104173	tufm	92	67.067	FBgn0024556	mEFTu1	84	67.067	Drosophila_melanogaster
ENSDARG00000104173	tufm	79	63.662	ENSETEG00000009601	TUFM	89	63.662	Echinops_telfairi
ENSDARG00000104173	tufm	89	72.250	ENSEBUG00000015907	tufm	66	72.750	Eptatretus_burgeri
ENSDARG00000104173	tufm	99	73.991	ENSEASG00005015477	TUFM	98	73.991	Equus_asinus_asinus
ENSDARG00000104173	tufm	99	73.991	ENSECAG00000019763	TUFM	99	73.991	Equus_caballus
ENSDARG00000104173	tufm	79	76.901	ENSEEUG00000001402	TUFM	89	76.901	Erinaceus_europaeus
ENSDARG00000104173	tufm	99	82.812	ENSELUG00000013410	tufm	96	82.812	Esox_lucius
ENSDARG00000104173	tufm	98	73.303	ENSFCAG00000003103	TUFM	64	73.378	Felis_catus
ENSDARG00000104173	tufm	88	74.112	ENSFDAG00000010881	TUFM	98	75.563	Fukomys_damarensis
ENSDARG00000104173	tufm	93	77.273	ENSFHEG00000020646	tufm	93	77.273	Fundulus_heteroclitus
ENSDARG00000104173	tufm	99	82.511	ENSGMOG00000014616	tufm	100	82.511	Gadus_morhua
ENSDARG00000104173	tufm	99	83.857	ENSGAFG00000004682	tufm	100	83.857	Gambusia_affinis
ENSDARG00000104173	tufm	99	83.632	ENSGACG00000012961	tufm	100	83.632	Gasterosteus_aculeatus
ENSDARG00000104173	tufm	98	76.659	ENSGAGG00000006132	TUFM	99	79.156	Gopherus_agassizii
ENSDARG00000104173	tufm	92	75.971	ENSGGOG00000014136	TUFM	99	72.124	Gorilla_gorilla
ENSDARG00000104173	tufm	99	84.753	ENSHBUG00000019031	tufm	93	84.753	Haplochromis_burtoni
ENSDARG00000104173	tufm	93	75.540	ENSHGLG00000006613	TUFM	92	75.540	Heterocephalus_glaber_female
ENSDARG00000104173	tufm	93	71.463	ENSHGLG00100004096	TUFM	92	71.463	Heterocephalus_glaber_male
ENSDARG00000104173	tufm	99	82.393	ENSHCOG00000014418	tufm	99	82.393	Hippocampus_comes
ENSDARG00000104173	tufm	95	44.954	ENSIPUG00000020682	-	91	52.516	Ictalurus_punctatus
ENSDARG00000104173	tufm	99	85.426	ENSIPUG00000022457	tufm	100	85.426	Ictalurus_punctatus
ENSDARG00000104173	tufm	99	73.378	ENSSTOG00000011837	TUFM	99	73.378	Ictidomys_tridecemlineatus
ENSDARG00000104173	tufm	99	73.483	ENSJJAG00000011840	Tufm	98	73.483	Jaculus_jaculus
ENSDARG00000104173	tufm	99	83.184	ENSKMAG00000009794	tufm	100	83.184	Kryptolebias_marmoratus
ENSDARG00000104173	tufm	99	81.614	ENSLBEG00000023735	tufm	100	81.614	Labrus_bergylta
ENSDARG00000104173	tufm	98	76.298	ENSLACG00000008242	TUFM	98	76.298	Latimeria_chalumnae
ENSDARG00000104173	tufm	94	74.109	ENSLAFG00000028911	TUFM	93	74.109	Loxodonta_africana
ENSDARG00000104173	tufm	99	72.566	ENSMFAG00000033739	TUFM	99	72.566	Macaca_fascicularis
ENSDARG00000104173	tufm	99	72.566	ENSMMUG00000003303	TUFM	99	72.566	Macaca_mulatta
ENSDARG00000104173	tufm	99	72.566	ENSMNEG00000006031	TUFM	99	72.566	Macaca_nemestrina
ENSDARG00000104173	tufm	99	72.931	ENSMLEG00000042133	TUFM	98	72.931	Mandrillus_leucophaeus
ENSDARG00000104173	tufm	99	84.753	ENSMAMG00000002053	tufm	100	84.753	Mastacembelus_armatus
ENSDARG00000104173	tufm	99	84.529	ENSMZEG00005010857	tufm	93	84.529	Maylandia_zebra
ENSDARG00000104173	tufm	99	72.036	ENSMAUG00000010490	Tufm	99	72.036	Mesocricetus_auratus
ENSDARG00000104173	tufm	99	71.812	ENSMICG00000007650	TUFM	99	71.812	Microcebus_murinus
ENSDARG00000104173	tufm	99	72.483	ENSMOCG00000010051	Tufm	99	72.483	Microtus_ochrogaster
ENSDARG00000104173	tufm	96	80.139	ENSMMOG00000012344	tufm	96	80.139	Mola_mola
ENSDARG00000104173	tufm	92	77.966	ENSMODG00000015564	TUFM	91	77.966	Monodelphis_domestica
ENSDARG00000104173	tufm	99	80.493	ENSMALG00000020254	tufm	100	80.493	Monopterus_albus
ENSDARG00000104173	tufm	99	73.378	MGP_CAROLIEiJ_G0030448	-	98	77.193	Mus_caroli
ENSDARG00000104173	tufm	99	73.378	MGP_CAROLIEiJ_G0030449	-	99	73.378	Mus_caroli
ENSDARG00000104173	tufm	99	73.378	ENSMUSG00000073838	Tufm	98	77.193	Mus_musculus
ENSDARG00000104173	tufm	99	73.154	MGP_PahariEiJ_G0013659	-	99	73.154	Mus_pahari
ENSDARG00000104173	tufm	99	73.154	MGP_PahariEiJ_G0013658	-	98	77.193	Mus_pahari
ENSDARG00000104173	tufm	99	67.975	MGP_SPRETEiJ_G0031563	-	99	67.975	Mus_spretus
ENSDARG00000104173	tufm	99	73.602	MGP_SPRETEiJ_G0031562	-	98	78.070	Mus_spretus
ENSDARG00000104173	tufm	80	77.778	ENSMPUG00000012816	TUFM	97	77.596	Mustela_putorius_furo
ENSDARG00000104173	tufm	92	76.513	ENSMLUG00000012335	-	91	76.513	Myotis_lucifugus
ENSDARG00000104173	tufm	99	72.707	ENSNGAG00000008610	Tufm	99	72.707	Nannospalax_galili
ENSDARG00000104173	tufm	99	72.422	ENSNBRG00000006466	tufm	97	83.836	Neolamprologus_brichardi
ENSDARG00000104173	tufm	99	67.550	ENSNLEG00000011063	TUFM	99	67.550	Nomascus_leucogenys
ENSDARG00000104173	tufm	77	78.098	ENSMEUG00000011131	TUFM	100	78.098	Notamacropus_eugenii
ENSDARG00000104173	tufm	98	62.613	ENSOPRG00000002318	-	97	62.613	Ochotona_princeps
ENSDARG00000104173	tufm	99	84.753	ENSONIG00000019389	tufm	100	84.753	Oreochromis_niloticus
ENSDARG00000104173	tufm	92	77.590	ENSOANG00000013114	TUFM	95	77.590	Ornithorhynchus_anatinus
ENSDARG00000104173	tufm	93	76.923	ENSOCUG00000002683	TUFM	91	76.923	Oryctolagus_cuniculus
ENSDARG00000104173	tufm	99	83.408	ENSORLG00000011497	tufm	100	83.408	Oryzias_latipes
ENSDARG00000104173	tufm	99	83.857	ENSORLG00020013437	tufm	100	83.857	Oryzias_latipes_hni
ENSDARG00000104173	tufm	99	83.408	ENSORLG00015003107	tufm	100	83.408	Oryzias_latipes_hsok
ENSDARG00000104173	tufm	99	84.529	ENSOMEG00000016958	tufm	100	84.529	Oryzias_melastigma
ENSDARG00000104173	tufm	99	72.707	ENSOGAG00000006875	TUFM	99	72.707	Otolemur_garnettii
ENSDARG00000104173	tufm	89	77.834	ENSOARG00000002357	TUFM	96	77.834	Ovis_aries
ENSDARG00000104173	tufm	92	75.971	ENSPPAG00000035168	TUFM	99	71.938	Pan_paniscus
ENSDARG00000104173	tufm	94	75.772	ENSPPRG00000014248	TUFM	98	73.378	Panthera_pardus
ENSDARG00000104173	tufm	94	75.418	ENSPTIG00000009980	TUFM	99	75.418	Panthera_tigris_altaica
ENSDARG00000104173	tufm	92	75.971	ENSPTRG00000007939	TUFM	99	72.124	Pan_troglodytes
ENSDARG00000104173	tufm	99	72.345	ENSPANG00000019624	TUFM	99	72.345	Papio_anubis
ENSDARG00000104173	tufm	99	80.580	ENSPKIG00000023809	tufm	98	80.580	Paramormyrops_kingsleyae
ENSDARG00000104173	tufm	70	77.143	ENSPSIG00000005302	TUFM	100	77.143	Pelodiscus_sinensis
ENSDARG00000104173	tufm	93	83.971	ENSPMGG00000015631	tufm	99	83.971	Periophthalmus_magnuspinnatus
ENSDARG00000104173	tufm	99	72.483	ENSPEMG00000012208	Tufm	99	72.483	Peromyscus_maniculatus_bairdii
ENSDARG00000104173	tufm	99	73.171	ENSPCIG00000025208	TUFM	99	73.171	Phascolarctos_cinereus
ENSDARG00000104173	tufm	99	82.960	ENSPFOG00000007043	tufm	100	82.960	Poecilia_formosa
ENSDARG00000104173	tufm	99	79.775	ENSPLAG00000014372	tufm	99	79.775	Poecilia_latipinna
ENSDARG00000104173	tufm	99	83.184	ENSPMEG00000019508	tufm	100	83.184	Poecilia_mexicana
ENSDARG00000104173	tufm	99	80.804	ENSPMEG00000014520	-	100	82.550	Poecilia_mexicana
ENSDARG00000104173	tufm	99	82.960	ENSPREG00000013913	tufm	100	82.960	Poecilia_reticulata
ENSDARG00000104173	tufm	99	72.036	ENSPPYG00000007226	TUFM	98	72.036	Pongo_abelii
ENSDARG00000104173	tufm	94	70.616	ENSPCAG00000015294	TUFM	93	70.616	Procavia_capensis
ENSDARG00000104173	tufm	99	72.036	ENSPCOG00000012267	TUFM	98	72.036	Propithecus_coquereli
ENSDARG00000104173	tufm	99	84.842	ENSPNYG00000008905	tufm	99	84.842	Pundamilia_nyererei
ENSDARG00000104173	tufm	99	84.753	ENSPNAG00000018881	tufm	100	84.753	Pygocentrus_nattereri
ENSDARG00000104173	tufm	99	73.154	ENSRNOG00000018604	Tufm	99	73.154	Rattus_norvegicus
ENSDARG00000104173	tufm	96	70.575	ENSRBIG00000042008	-	97	70.575	Rhinopithecus_bieti
ENSDARG00000104173	tufm	56	74.704	ENSRBIG00000036713	-	93	74.704	Rhinopithecus_bieti
ENSDARG00000104173	tufm	61	74.359	ENSRROG00000044977	-	74	74.359	Rhinopithecus_roxellana
ENSDARG00000104173	tufm	99	71.840	ENSRROG00000036858	-	99	71.840	Rhinopithecus_roxellana
ENSDARG00000104173	tufm	97	57.500	YOR187W	TUF1	99	57.500	Saccharomyces_cerevisiae
ENSDARG00000104173	tufm	95	73.427	ENSSBOG00000026542	TUFM	95	73.427	Saimiri_boliviensis_boliviensis
ENSDARG00000104173	tufm	92	78.261	ENSSHAG00000012121	TUFM	96	78.261	Sarcophilus_harrisii
ENSDARG00000104173	tufm	99	80.178	ENSSFOG00015013352	tufm	100	80.178	Scleropages_formosus
ENSDARG00000104173	tufm	99	83.184	ENSSMAG00000010053	tufm	100	83.184	Scophthalmus_maximus
ENSDARG00000104173	tufm	99	84.753	ENSSDUG00000016896	tufm	100	84.753	Seriola_dumerili
ENSDARG00000104173	tufm	99	84.978	ENSSLDG00000006494	tufm	100	84.978	Seriola_lalandi_dorsalis
ENSDARG00000104173	tufm	81	76.731	ENSSARG00000011228	TUFM	95	76.731	Sorex_araneus
ENSDARG00000104173	tufm	95	70.000	ENSSPUG00000016312	TUFM	99	70.000	Sphenodon_punctatus
ENSDARG00000104173	tufm	99	83.184	ENSSPAG00000009936	tufm	99	83.184	Stegastes_partitus
ENSDARG00000104173	tufm	99	72.931	ENSSSCG00000007803	TUFM	99	72.931	Sus_scrofa
ENSDARG00000104173	tufm	99	83.408	ENSTRUG00000008300	tufm	100	83.408	Takifugu_rubripes
ENSDARG00000104173	tufm	92	73.608	ENSTBEG00000015029	TUFM	90	74.818	Tupaia_belangeri
ENSDARG00000104173	tufm	61	77.091	ENSTTRG00000001980	-	100	77.091	Tursiops_truncatus
ENSDARG00000104173	tufm	58	74.806	ENSTTRG00000005930	-	57	74.806	Tursiops_truncatus
ENSDARG00000104173	tufm	99	72.788	ENSUAMG00000001471	TUFM	100	72.788	Ursus_americanus
ENSDARG00000104173	tufm	90	77.340	ENSUMAG00000009341	TUFM	99	77.340	Ursus_maritimus
ENSDARG00000104173	tufm	61	75.636	ENSVPAG00000009541	TUFM	100	75.636	Vicugna_pacos
ENSDARG00000104173	tufm	99	73.602	ENSVVUG00000024170	TUFM	99	73.602	Vulpes_vulpes
ENSDARG00000104173	tufm	84	50.794	ENSXETG00000028019	-	70	90.426	Xenopus_tropicalis
ENSDARG00000104173	tufm	97	82.069	ENSXMAG00000011848	tufm	99	82.069	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0003746	translation elongation factor activity	-	IEA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0006412	translation	-	IEA	Process
GO:0006414	translational elongation	21873635.	IBA	Process
GO:0006414	translational elongation	-	IEA	Process
GO:0070125	mitochondrial translational elongation	21873635.	IBA	Process