EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000104434 (Gene tree)
Gene ID: 100537264
Gene Symbol: CABZ01048453.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 3318 bases
Position: chrKN150380.1:4419-7736
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000134523	RNA_pol_Rpb2_1	PF04563.15	3.3e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000168535	CABZ01048453.1-201	875	-	ENSDARP00000134523	244 (aa)	-	A0A0G2KQ58

Gene Model

Click here to download ENSDARG00000104434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000104434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000104434	CABZ01048453.1	92	97.321	ENSDARG00000098783	polr2b	61	97.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000104434	CABZ01048453.1	89	96.774	ENSG00000047315	POLR2B	72	94.545	Homo_sapiens
ENSDARG00000104434	CABZ01048453.1	68	35.152	ENSCING00000018498	-	84	35.152	Ciona_intestinalis
ENSDARG00000104434	CABZ01048453.1	92	96.429	ENSGAFG00000016504	POLR2B	61	96.429	Gambusia_affinis
ENSDARG00000104434	CABZ01048453.1	92	95.982	ENSLBEG00000010055	-	61	95.982	Labrus_bergylta
ENSDARG00000104434	CABZ01048453.1	92	95.982	ENSLBEG00000016719	POLR2B	61	95.982	Labrus_bergylta
ENSDARG00000104434	CABZ01048453.1	75	38.798	ENSMGAG00000012873	-	70	38.798	Meleagris_gallopavo
ENSDARG00000104434	CABZ01048453.1	73	38.547	ENSPMAG00000002089	-	65	38.547	Petromyzon_marinus
ENSDARG00000104434	CABZ01048453.1	88	91.163	ENSSPUG00000018434	-	61	91.163	Sphenodon_punctatus
ENSDARG00000104434	CABZ01048453.1	68	97.576	ENSTRUG00000019743	polr2b	68	97.576	Takifugu_rubripes
ENSDARG00000104434	CABZ01048453.1	92	96.429	ENSXCOG00000014657	POLR2B	61	96.429	Xiphophorus_couchianus