EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000104516 (Gene tree)
Gene ID
393257
Gene Symbol
polr3d
Alias
zgc:56407|zgc:77250
Full Name
polymerase (RNA) III (DNA directed) polypeptide D
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Minus strand
Length
16443 bases
Position
chrKN150353.1:391-16833
Accession
ZDB-GENE-040426-1017
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000137980RNA_pol_Rpc4PF05132.144.3e-2811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000166535-6085-ENSDARP00000137980381 (aa)-A8E5I3
Gene Model
Click here to download ENSDARG00000104516's gene model file
Pathways
Pathway IDPathway NameSource
dre03020RNA polymeraseKEGG
dre04623Cytosolic DNA-sensing pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000104516's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000104516polr3d9641.935ENSDARG00000042054zgc:1719719040.741
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000104516polr3d9459.030ENSG00000168495POLR3D9358.221Homo_sapiens
ENSDARG00000104516polr3d9338.992ENSAPOG00000017634zgc:1719718739.474Acanthochromis_polyacanthus
ENSDARG00000104516polr3d9963.239ENSAPOG00000012197polr3d9964.781Acanthochromis_polyacanthus
ENSDARG00000104516polr3d9955.216ENSAMEG00000003221POLR3D9856.234Ailuropoda_melanoleuca
ENSDARG00000104516polr3d9336.413ENSACIG00000003707zgc:1719719636.973Amphilophus_citrinellus
ENSDARG00000104516polr3d9964.062ENSACIG00000017832polr3d9964.323Amphilophus_citrinellus
ENSDARG00000104516polr3d9338.196ENSAOCG00000007733zgc:1719718938.560Amphiprion_ocellaris
ENSDARG00000104516polr3d9564.754ENSAOCG00000005037polr3d9466.393Amphiprion_ocellaris
ENSDARG00000104516polr3d9564.850ENSAPEG00000013751polr3d9466.485Amphiprion_percula
ENSDARG00000104516polr3d9637.984ENSAPEG00000016107zgc:1719719037.688Amphiprion_percula
ENSDARG00000104516polr3d9339.257ENSATEG00000023125zgc:1719719437.783Anabas_testudineus
ENSDARG00000104516polr3d9962.857ENSATEG00000023119polr3d9864.416Anabas_testudineus
ENSDARG00000104516polr3d8751.297ENSAPLG00000014393POLR3D9950.142Anas_platyrhynchos
ENSDARG00000104516polr3d8859.064ENSACAG00000010592POLR3D8858.187Anolis_carolinensis
ENSDARG00000104516polr3d9459.030ENSANAG00000030023POLR3D9358.221Aotus_nancymaae
ENSDARG00000104516polr3d9938.693ENSACLG00000000074zgc:1719719738.806Astatotilapia_calliptera
ENSDARG00000104516polr3d9962.338ENSACLG00000010147polr3d9863.896Astatotilapia_calliptera
ENSDARG00000104516polr3d9976.650ENSAMXG00000010079polr3d9677.665Astyanax_mexicanus
ENSDARG00000104516polr3d9539.726ENSAMXG00000019418zgc:1719719040.000Astyanax_mexicanus
ENSDARG00000104516polr3d9957.107ENSBTAG00000010036POLR3D9358.221Bos_taurus
ENSDARG00000104516polr3d9458.760ENSCJAG00000020278POLR3D8657.951Callithrix_jacchus
ENSDARG00000104516polr3d9956.997ENSCAFG00000009455POLR3D9856.234Canis_familiaris
ENSDARG00000104516polr3d9956.997ENSCAFG00020013027POLR3D9856.234Canis_lupus_dingo
ENSDARG00000104516polr3d9957.107ENSCHIG00000012279POLR3D9358.221Capra_hircus
ENSDARG00000104516polr3d9957.360ENSTSYG00000009055POLR3D9358.491Carlito_syrichta
ENSDARG00000104516polr3d8957.307ENSCAPG00000010394POLR3D9856.447Cavia_aperea
ENSDARG00000104516polr3d9758.005ENSCPOG00000003679POLR3D9557.218Cavia_porcellus
ENSDARG00000104516polr3d9459.030ENSCCAG00000019817POLR3D9358.221Cebus_capucinus
ENSDARG00000104516polr3d9459.730ENSCATG00000025950POLR3D9358.919Cercocebus_atys
ENSDARG00000104516polr3d9957.107ENSCLAG00000014993POLR3D9856.345Chinchilla_lanigera
ENSDARG00000104516polr3d9459.459ENSCSAG00000016525POLR3D9358.649Chlorocebus_sabaeus
ENSDARG00000104516polr3d9950.254ENSCHOG00000000228POLR3D9849.492Choloepus_hoffmanni
ENSDARG00000104516polr3d9458.466ENSCPBG00000001313POLR3D9357.672Chrysemys_picta_bellii
ENSDARG00000104516polr3d9133.516ENSCING00000008141-9132.258Ciona_intestinalis
ENSDARG00000104516polr3d9931.421ENSCSAVG00000007119-8831.768Ciona_savignyi
ENSDARG00000104516polr3d9957.360ENSCANG00000043589POLR3D9956.599Colobus_angolensis_palliatus
ENSDARG00000104516polr3d9458.221ENSCGRG00001010339Polr3d9357.412Cricetulus_griseus_chok1gshd
ENSDARG00000104516polr3d9458.221ENSCGRG00000003956Polr3d9357.412Cricetulus_griseus_crigri
ENSDARG00000104516polr3d9862.667ENSCSEG00000008123polr3d9764.267Cynoglossus_semilaevis
ENSDARG00000104516polr3d9938.308ENSCSEG00000015509zgc:1719719736.567Cynoglossus_semilaevis
ENSDARG00000104516polr3d9137.255ENSCVAG00000009078-9734.646Cyprinodon_variegatus
ENSDARG00000104516polr3d9962.105ENSCVAG00000020687polr3d9963.517Cyprinodon_variegatus
ENSDARG00000104516polr3d9956.091ENSDNOG00000013488POLR3D9856.345Dasypus_novemcinctus
ENSDARG00000104516polr3d9758.530ENSDORG00000011174Polr3d9557.743Dipodomys_ordii
ENSDARG00000104516polr3d9955.584ENSETEG00000016516POLR3D9854.822Echinops_telfairi
ENSDARG00000104516polr3d7540.446ENSEBUG00000014414polr3d8939.172Eptatretus_burgeri
ENSDARG00000104516polr3d9955.838ENSEASG00005018824POLR3D9356.873Equus_asinus_asinus
ENSDARG00000104516polr3d9956.853ENSECAG00000025090-9357.951Equus_caballus
ENSDARG00000104516polr3d9957.215ENSEEUG00000007632POLR3D9956.456Erinaceus_europaeus
ENSDARG00000104516polr3d9466.120ENSELUG00000016978polr3d9966.667Esox_lucius
ENSDARG00000104516polr3d9641.316ENSELUG00000017642zgc:1719718641.047Esox_lucius
ENSDARG00000104516polr3d9457.951ENSFCAG00000005346POLR3D9357.143Felis_catus
ENSDARG00000104516polr3d8757.101ENSFALG00000010907POLR3D9956.012Ficedula_albicollis
ENSDARG00000104516polr3d9956.853ENSFDAG00000010144POLR3D9856.091Fukomys_damarensis
ENSDARG00000104516polr3d10062.694ENSFHEG00000000508polr3d10064.249Fundulus_heteroclitus
ENSDARG00000104516polr3d9936.634ENSFHEG00000003803-8937.568Fundulus_heteroclitus
ENSDARG00000104516polr3d9565.205ENSGMOG00000006293polr3d10065.753Gadus_morhua
ENSDARG00000104516polr3d8743.627ENSGMOG00000015819zgc:1719719944.390Gadus_morhua
ENSDARG00000104516polr3d8454.354ENSGALG00000032501-5954.849Gallus_gallus
ENSDARG00000104516polr3d9137.500ENSGAFG00000009259zgc:1719718936.800Gambusia_affinis
ENSDARG00000104516polr3d9960.995ENSGAFG00000010268polr3d9763.830Gambusia_affinis
ENSDARG00000104516polr3d9539.691ENSGACG00000015436zgc:1719719936.538Gasterosteus_aculeatus
ENSDARG00000104516polr3d9962.663ENSGACG00000011126polr3d9864.230Gasterosteus_aculeatus
ENSDARG00000104516polr3d9458.575ENSGAGG00000023229POLR3D9357.784Gopherus_agassizii
ENSDARG00000104516polr3d9459.030ENSGGOG00000007302POLR3D9358.221Gorilla_gorilla
ENSDARG00000104516polr3d9938.155ENSHBUG00000020493zgc:1719719639.828Haplochromis_burtoni
ENSDARG00000104516polr3d9962.338ENSHBUG00000012288polr3d9863.896Haplochromis_burtoni
ENSDARG00000104516polr3d9458.537ENSHGLG00000015415POLR3D9357.724Heterocephalus_glaber_female
ENSDARG00000104516polr3d9458.537ENSHGLG00100014950POLR3D9357.724Heterocephalus_glaber_male
ENSDARG00000104516polr3d9960.309ENSHCOG00000002228polr3d9961.856Hippocampus_comes
ENSDARG00000104516polr3d9336.592ENSHCOG00000018819-9336.675Hippocampus_comes
ENSDARG00000104516polr3d9969.797ENSIPUG00000003480polr3d9969.797Ictalurus_punctatus
ENSDARG00000104516polr3d9441.463ENSIPUG00000008608zgc:1719719040.108Ictalurus_punctatus
ENSDARG00000104516polr3d9957.107ENSSTOG00000016519POLR3D9856.345Ictidomys_tridecemlineatus
ENSDARG00000104516polr3d9956.743ENSJJAG00000006743Polr3d9855.980Jaculus_jaculus
ENSDARG00000104516polr3d9961.097ENSKMAG00000005145polr3d9964.323Kryptolebias_marmoratus
ENSDARG00000104516polr3d9343.280ENSLBEG00000009545zgc:1719718942.021Labrus_bergylta
ENSDARG00000104516polr3d9962.597ENSLBEG00000003430polr3d9864.156Labrus_bergylta
ENSDARG00000104516polr3d9758.854ENSLACG00000016654POLR3D9659.115Latimeria_chalumnae
ENSDARG00000104516polr3d9541.146ENSLOCG00000006467zgc:1719719640.602Lepisosteus_oculatus
ENSDARG00000104516polr3d9464.343ENSLOCG00000016080polr3d9564.611Lepisosteus_oculatus
ENSDARG00000104516polr3d9460.108ENSLAFG00000001562POLR3D9359.299Loxodonta_africana
ENSDARG00000104516polr3d9459.730ENSMFAG00000029141POLR3D9358.919Macaca_fascicularis
ENSDARG00000104516polr3d9459.459ENSMMUG00000023226POLR3D9358.649Macaca_mulatta
ENSDARG00000104516polr3d9459.730ENSMNEG00000039410POLR3D9358.919Macaca_nemestrina
ENSDARG00000104516polr3d9459.730ENSMLEG00000031413POLR3D9358.919Mandrillus_leucophaeus
ENSDARG00000104516polr3d9439.096ENSMAMG00000020617zgc:1719719040.633Mastacembelus_armatus
ENSDARG00000104516polr3d9761.867ENSMAMG00000008914polr3d9863.185Mastacembelus_armatus
ENSDARG00000104516polr3d9962.338ENSMZEG00005011442polr3d9863.896Maylandia_zebra
ENSDARG00000104516polr3d9938.693ENSMZEG00005003175zgc:1719719738.806Maylandia_zebra
ENSDARG00000104516polr3d9458.221ENSMAUG00000006844Polr3d9357.412Mesocricetus_auratus
ENSDARG00000104516polr3d9957.107ENSMICG00000001049POLR3D9358.221Microcebus_murinus
ENSDARG00000104516polr3d9457.951ENSMOCG00000005195Polr3d9357.143Microtus_ochrogaster
ENSDARG00000104516polr3d9964.042ENSMMOG00000013845polr3d9865.617Mola_mola
ENSDARG00000104516polr3d9756.464ENSMODG00000009491POLR3D9855.673Monodelphis_domestica
ENSDARG00000104516polr3d9340.437ENSMALG00000005659zgc:1719719138.624Monopterus_albus
ENSDARG00000104516polr3d9963.144ENSMALG00000002928polr3d9964.691Monopterus_albus
ENSDARG00000104516polr3d9458.221MGP_CAROLIEiJ_G0019481Polr3d9357.412Mus_caroli
ENSDARG00000104516polr3d9458.221ENSMUSG00000000776Polr3d9357.412Mus_musculus
ENSDARG00000104516polr3d9454.987MGP_PahariEiJ_G0030498Polr3d9354.447Mus_pahari
ENSDARG00000104516polr3d9458.491MGP_SPRETEiJ_G0020373Polr3d9357.682Mus_spretus
ENSDARG00000104516polr3d9956.743ENSMPUG00000003653POLR3D9855.980Mustela_putorius_furo
ENSDARG00000104516polr3d9458.221ENSMLUG00000002109POLR3D9357.412Myotis_lucifugus
ENSDARG00000104516polr3d9956.997ENSNGAG00000013872Polr3d9856.234Nannospalax_galili
ENSDARG00000104516polr3d9962.597ENSNBRG00000019106polr3d9864.156Neolamprologus_brichardi
ENSDARG00000104516polr3d9031.593ENSNBRG00000022951zgc:1719719232.153Neolamprologus_brichardi
ENSDARG00000104516polr3d9957.106ENSMEUG00000000465POLR3D9656.331Notamacropus_eugenii
ENSDARG00000104516polr3d9957.614ENSOPRG00000013146POLR3D9857.868Ochotona_princeps
ENSDARG00000104516polr3d9956.313ENSODEG00000005884POLR3D9955.556Octodon_degus
ENSDARG00000104516polr3d9338.919ENSONIG00000007280zgc:1719718739.178Oreochromis_niloticus
ENSDARG00000104516polr3d9962.338ENSONIG00000010634polr3d9863.896Oreochromis_niloticus
ENSDARG00000104516polr3d9654.881ENSOANG00000010776POLR3D9454.354Ornithorhynchus_anatinus
ENSDARG00000104516polr3d9457.951ENSOCUG00000017410POLR3D9357.143Oryctolagus_cuniculus
ENSDARG00000104516polr3d9962.857ENSORLG00000011583polr3d9964.416Oryzias_latipes
ENSDARG00000104516polr3d9664.690ENSORLG00020005668polr3d9466.307Oryzias_latipes_hni
ENSDARG00000104516polr3d9861.316ENSORLG00015020291polr3d9362.264Oryzias_latipes_hsok
ENSDARG00000104516polr3d9565.027ENSOMEG00000010120polr3d9366.667Oryzias_melastigma
ENSDARG00000104516polr3d9957.360ENSOGAG00000004912POLR3D9856.599Otolemur_garnettii
ENSDARG00000104516polr3d7539.249ENSOARG00000009142-9939.249Ovis_aries
ENSDARG00000104516polr3d9956.853ENSOARG00000010372-7457.951Ovis_aries
ENSDARG00000104516polr3d9459.030ENSPPAG00000029591POLR3D9358.221Pan_paniscus
ENSDARG00000104516polr3d9457.951ENSPPRG00000022827POLR3D9357.143Panthera_pardus
ENSDARG00000104516polr3d9457.951ENSPTIG00000018239POLR3D9357.143Panthera_tigris_altaica
ENSDARG00000104516polr3d9459.030ENSPTRG00000020056POLR3D9358.221Pan_troglodytes
ENSDARG00000104516polr3d9459.730ENSPANG00000009440POLR3D9358.919Papio_anubis
ENSDARG00000104516polr3d9543.603ENSPKIG00000025283zgc:1719719242.969Paramormyrops_kingsleyae
ENSDARG00000104516polr3d9962.121ENSPKIG00000006727polr3d9962.374Paramormyrops_kingsleyae
ENSDARG00000104516polr3d9754.663ENSPSIG00000006113POLR3D9553.886Pelodiscus_sinensis
ENSDARG00000104516polr3d9962.887ENSPMGG00000021658polr3d9863.144Periophthalmus_magnuspinnatus
ENSDARG00000104516polr3d9458.221ENSPEMG00000023314Polr3d9357.412Peromyscus_maniculatus_bairdii
ENSDARG00000104516polr3d9942.627ENSPMAG00000001455polr3d9847.242Petromyzon_marinus
ENSDARG00000104516polr3d9757.368ENSPCIG00000012699POLR3D9656.331Phascolarctos_cinereus
ENSDARG00000104516polr3d9137.500ENSPFOG00000011089zgc:1719718936.800Poecilia_formosa
ENSDARG00000104516polr3d9958.794ENSPFOG00000012698polr3d9764.362Poecilia_formosa
ENSDARG00000104516polr3d10058.145ENSPLAG00000008149polr3d9763.830Poecilia_latipinna
ENSDARG00000104516polr3d9133.799ENSPLAG00000003645zgc:1719718632.527Poecilia_latipinna
ENSDARG00000104516polr3d9960.052ENSPMEG00000002702polr3d9762.797Poecilia_mexicana
ENSDARG00000104516polr3d9137.500ENSPMEG00000016953zgc:1719718936.800Poecilia_mexicana
ENSDARG00000104516polr3d9959.115ENSPREG00000007593polr3d9859.173Poecilia_reticulata
ENSDARG00000104516polr3d9138.315ENSPREG00000003755-8937.600Poecilia_reticulata
ENSDARG00000104516polr3d9459.299ENSPPYG00000018419POLR3D9358.491Pongo_abelii
ENSDARG00000104516polr3d9952.284ENSPCAG00000001971POLR3D9354.133Procavia_capensis
ENSDARG00000104516polr3d9957.360ENSPCOG00000028134POLR3D9358.491Propithecus_coquereli
ENSDARG00000104516polr3d9955.838ENSPVAG00000009873POLR3D9356.873Pteropus_vampyrus
ENSDARG00000104516polr3d9962.338ENSPNYG00000016306polr3d9863.896Pundamilia_nyererei
ENSDARG00000104516polr3d9034.973ENSPNYG00000008902zgc:1719718935.135Pundamilia_nyererei
ENSDARG00000104516polr3d9975.318ENSPNAG00000022324polr3d9976.081Pygocentrus_nattereri
ENSDARG00000104516polr3d9542.507ENSPNAG00000018934zgc:1719719141.287Pygocentrus_nattereri
ENSDARG00000104516polr3d9458.491ENSRNOG00000010028Polr3d9357.682Rattus_norvegicus
ENSDARG00000104516polr3d9459.459ENSRBIG00000035406POLR3D9358.649Rhinopithecus_bieti
ENSDARG00000104516polr3d9459.459ENSRROG00000037278POLR3D9358.649Rhinopithecus_roxellana
ENSDARG00000104516polr3d9459.030ENSSBOG00000024956POLR3D9358.221Saimiri_boliviensis_boliviensis
ENSDARG00000104516polr3d8757.647ENSSHAG00000018257POLR3D9956.765Sarcophilus_harrisii
ENSDARG00000104516polr3d9964.750ENSSFOG00015010611polr3d9965.000Scleropages_formosus
ENSDARG00000104516polr3d9141.690ENSSFOG00015011547zgc:1719719042.985Scleropages_formosus
ENSDARG00000104516polr3d9962.304ENSSMAG00000006271polr3d9763.874Scophthalmus_maximus
ENSDARG00000104516polr3d9938.575ENSSMAG00000001465zgc:1719719737.956Scophthalmus_maximus
ENSDARG00000104516polr3d9965.625ENSSDUG00000020718polr3d9867.013Seriola_dumerili
ENSDARG00000104516polr3d9938.835ENSSDUG00000016019zgc:1719719738.647Seriola_dumerili
ENSDARG00000104516polr3d9938.702ENSSLDG00000015968zgc:1719719738.517Seriola_lalandi_dorsalis
ENSDARG00000104516polr3d9965.365ENSSLDG00000009643polr3d9866.753Seriola_lalandi_dorsalis
ENSDARG00000104516polr3d9455.256ENSSARG00000012844POLR3D9354.667Sorex_araneus
ENSDARG00000104516polr3d9957.545ENSSPUG00000000719POLR3D9856.777Sphenodon_punctatus
ENSDARG00000104516polr3d9864.829ENSSPAG00000023326polr3d9866.404Stegastes_partitus
ENSDARG00000104516polr3d9837.275ENSSPAG00000010384zgc:1719719437.629Stegastes_partitus
ENSDARG00000104516polr3d9957.360ENSSSCG00000009622POLR3D9856.599Sus_scrofa
ENSDARG00000104516polr3d9564.110ENSTRUG00000003555polr3d9465.753Takifugu_rubripes
ENSDARG00000104516polr3d9960.881ENSTNIG00000006282polr3d9962.435Tetraodon_nigroviridis
ENSDARG00000104516polr3d9957.614ENSTTRG00000012745POLR3D9856.853Tursiops_truncatus
ENSDARG00000104516polr3d9054.648ENSUAMG00000026868POLR3D9655.775Ursus_americanus
ENSDARG00000104516polr3d9956.997ENSUMAG00000005099POLR3D9856.234Ursus_maritimus
ENSDARG00000104516polr3d9956.997ENSVVUG00000005290POLR3D9856.234Vulpes_vulpes
ENSDARG00000104516polr3d9952.284ENSXETG00000010534polr3d9753.367Xenopus_tropicalis
ENSDARG00000104516polr3d9460.882ENSXCOG00000015872polr3d9363.462Xiphophorus_couchianus
ENSDARG00000104516polr3d9138.043ENSXMAG00000014555-8937.333Xiphophorus_maculatus
ENSDARG00000104516polr3d9661.789ENSXMAG00000001872polr3d9464.011Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001056RNA polymerase III activity21873635.IBAFunction
GO:0003677DNA binding-IEAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity-IEAFunction
GO:0005666RNA polymerase III complex21873635.IBAComponent
GO:0005666RNA polymerase III complex-IEAComponent
GO:0006383transcription by RNA polymerase III-IEAProcess

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