EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000104783 (Gene tree)
Gene ID: 103909533
Gene Symbol: si:ch73-221f6.4
Alias: -
Full Name: si:ch73-221f6.4
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 3900 bases
Position: chr1:58628165-58632064
Accession: ZDB-GENE-121214-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000135156	zf-C2H2	PF00096.26	6.4e-45	1	7
ENSDARP00000135156	zf-C2H2	PF00096.26	6.4e-45	2	7
ENSDARP00000135156	zf-C2H2	PF00096.26	6.4e-45	3	7
ENSDARP00000135156	zf-C2H2	PF00096.26	6.4e-45	4	7
ENSDARP00000135156	zf-C2H2	PF00096.26	6.4e-45	5	7
ENSDARP00000135156	zf-C2H2	PF00096.26	6.4e-45	6	7
ENSDARP00000135156	zf-C2H2	PF00096.26	6.4e-45	7	7
ENSDARP00000135156	zf-met	PF12874.7	1.3e-15	1	3
ENSDARP00000135156	zf-met	PF12874.7	1.3e-15	2	3
ENSDARP00000135156	zf-met	PF12874.7	1.3e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000158654	-	1470	XM_017357167	ENSDARP00000135156	489 (aa)	XP_017212656	A0A0N4SU12

Gene Model

Click here to download ENSDARG00000104783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000104783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000104783	si:ch73-221f6.4	99	72.201	ENSDARG00000096528	si:ch73-236c18.9	99	72.394
ENSDARG00000104783	si:ch73-221f6.4	99	79.441	ENSDARG00000104904	si:ch73-221f6.1	99	79.840
ENSDARG00000104783	si:ch73-221f6.4	99	78.571	ENSDARG00000104807	si:ch73-221f6.3	100	78.706
ENSDARG00000104783	si:ch73-221f6.4	88	44.854	ENSDARG00000105295	LO017784.1	96	42.270
ENSDARG00000104783	si:ch73-221f6.4	99	74.494	ENSDARG00000090836	si:ch211-191d2.2	99	75.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000104783	si:ch73-221f6.4	68	42.857	ENSACIG00000008886	znf1164	91	42.857	Amphilophus_citrinellus
ENSDARG00000104783	si:ch73-221f6.4	64	43.434	ENSPNYG00000024183	zgc:173577	97	43.434	Pundamilia_nyererei