EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000104889 (Gene tree)
Gene ID: 570700
Gene Symbol: kpnb1
Alias: wu:fc12b10|zgc:123184
Full Name: karyopherin (importin) beta 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 13246 bases
Position: chr19:48024457-48037702
Accession: ZDB-GENE-030131-2579
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000135519	IBN_N	PF03810.19	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000163823	-	3774	-	ENSDARP00000135519	876 (aa)	-	A0A0R4IMZ8

Gene Model

Click here to download ENSDARG00000104889's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000104889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000104889	kpnb1	100	92.123	ENSG00000108424	KPNB1	99	95.205	Homo_sapiens
ENSDARG00000104889	kpnb1	100	97.032	ENSAPOG00000020572	kpnb1	100	97.032	Acanthochromis_polyacanthus
ENSDARG00000104889	kpnb1	96	92.417	ENSAMEG00000004613	KPNB1	100	92.417	Ailuropoda_melanoleuca
ENSDARG00000104889	kpnb1	98	96.963	ENSACIG00000023130	kpnb1	99	96.963	Amphilophus_citrinellus
ENSDARG00000104889	kpnb1	100	97.032	ENSAOCG00000007048	kpnb1	100	97.032	Amphiprion_ocellaris
ENSDARG00000104889	kpnb1	100	97.032	ENSAPEG00000008270	kpnb1	100	97.032	Amphiprion_percula
ENSDARG00000104889	kpnb1	100	97.032	ENSATEG00000015139	kpnb1	100	97.032	Anabas_testudineus
ENSDARG00000104889	kpnb1	96	91.953	ENSAPLG00000010177	KPNB1	96	91.953	Anas_platyrhynchos
ENSDARG00000104889	kpnb1	100	92.694	ENSACAG00000007097	KPNB1	100	92.694	Anolis_carolinensis
ENSDARG00000104889	kpnb1	100	89.384	ENSANAG00000024932	-	99	89.384	Aotus_nancymaae
ENSDARG00000104889	kpnb1	100	96.804	ENSACLG00000015070	kpnb1	100	96.804	Astatotilapia_calliptera
ENSDARG00000104889	kpnb1	100	98.059	ENSAMXG00000041903	kpnb1	100	98.059	Astyanax_mexicanus
ENSDARG00000104889	kpnb1	100	92.580	ENSBTAG00000006586	KPNB1	100	92.580	Bos_taurus
ENSDARG00000104889	kpnb1	99	48.464	WBGene00002075	imb-1	98	48.464	Caenorhabditis_elegans
ENSDARG00000104889	kpnb1	100	92.237	ENSCJAG00000007834	KPNB1	100	92.237	Callithrix_jacchus
ENSDARG00000104889	kpnb1	100	92.580	ENSCAFG00000016678	KPNB1	100	92.580	Canis_familiaris
ENSDARG00000104889	kpnb1	100	92.580	ENSCAFG00020023205	KPNB1	100	92.580	Canis_lupus_dingo
ENSDARG00000104889	kpnb1	100	92.580	ENSCHIG00000014896	KPNB1	100	92.580	Capra_hircus
ENSDARG00000104889	kpnb1	100	90.525	ENSTSYG00000014472	KPNB1	99	90.525	Carlito_syrichta
ENSDARG00000104889	kpnb1	96	92.527	ENSCAPG00000014185	KPNB1	100	92.527	Cavia_aperea
ENSDARG00000104889	kpnb1	100	92.466	ENSCPOG00000006566	KPNB1	100	92.466	Cavia_porcellus
ENSDARG00000104889	kpnb1	100	85.488	ENSCCAG00000029263	-	99	85.488	Cebus_capucinus
ENSDARG00000104889	kpnb1	97	78.873	ENSCCAG00000018551	-	100	78.873	Cebus_capucinus
ENSDARG00000104889	kpnb1	100	92.123	ENSCATG00000037124	KPNB1	100	92.123	Cercocebus_atys
ENSDARG00000104889	kpnb1	100	92.352	ENSCLAG00000017091	KPNB1	100	92.352	Chinchilla_lanigera
ENSDARG00000104889	kpnb1	100	92.123	ENSCSAG00000002605	KPNB1	100	92.123	Chlorocebus_sabaeus
ENSDARG00000104889	kpnb1	73	81.132	ENSCHOG00000010604	KPNB1	73	81.132	Choloepus_hoffmanni
ENSDARG00000104889	kpnb1	99	92.932	ENSCPBG00000027423	KPNB1	94	92.932	Chrysemys_picta_bellii
ENSDARG00000104889	kpnb1	99	65.564	ENSCING00000004639	-	99	65.564	Ciona_intestinalis
ENSDARG00000104889	kpnb1	100	62.486	ENSCSAVG00000008624	-	100	62.486	Ciona_savignyi
ENSDARG00000104889	kpnb1	96	91.424	ENSCANG00000013489	KPNB1	100	91.424	Colobus_angolensis_palliatus
ENSDARG00000104889	kpnb1	100	92.352	ENSCGRG00001016042	Kpnb1	100	92.352	Cricetulus_griseus_chok1gshd
ENSDARG00000104889	kpnb1	96	92.408	ENSCGRG00000013910	Kpnb1	100	92.408	Cricetulus_griseus_crigri
ENSDARG00000104889	kpnb1	97	93.662	ENSCSEG00000007991	kpnb1	100	93.662	Cynoglossus_semilaevis
ENSDARG00000104889	kpnb1	99	62.557	FBgn0262743	Fs(2)Ket	99	62.557	Drosophila_melanogaster
ENSDARG00000104889	kpnb1	98	80.974	ENSEBUG00000013869	kpnb1	98	80.974	Eptatretus_burgeri
ENSDARG00000104889	kpnb1	100	92.580	ENSEASG00005000805	KPNB1	100	92.580	Equus_asinus_asinus
ENSDARG00000104889	kpnb1	100	92.580	ENSECAG00000014560	KPNB1	100	92.580	Equus_caballus
ENSDARG00000104889	kpnb1	85	91.960	ENSEEUG00000005046	KPNB1	88	91.960	Erinaceus_europaeus
ENSDARG00000104889	kpnb1	100	96.575	ENSELUG00000015847	kpnb1	100	96.575	Esox_lucius
ENSDARG00000104889	kpnb1	100	92.580	ENSFCAG00000023994	KPNB1	100	92.580	Felis_catus
ENSDARG00000104889	kpnb1	96	92.764	ENSFDAG00000019923	KPNB1	100	92.764	Fukomys_damarensis
ENSDARG00000104889	kpnb1	100	96.005	ENSFHEG00000020199	kpnb1	100	96.005	Fundulus_heteroclitus
ENSDARG00000104889	kpnb1	100	91.553	ENSGMOG00000011607	kpnb1	99	91.553	Gadus_morhua
ENSDARG00000104889	kpnb1	100	92.352	ENSGALG00000036962	KPNB1	100	92.352	Gallus_gallus
ENSDARG00000104889	kpnb1	100	95.776	ENSGAFG00000000783	kpnb1	100	95.776	Gambusia_affinis
ENSDARG00000104889	kpnb1	100	91.977	ENSGACG00000014765	kpnb1	100	91.977	Gasterosteus_aculeatus
ENSDARG00000104889	kpnb1	96	92.390	ENSGAGG00000023737	KPNB1	92	92.390	Gopherus_agassizii
ENSDARG00000104889	kpnb1	100	92.123	ENSGGOG00000008089	KPNB1	100	92.123	Gorilla_gorilla
ENSDARG00000104889	kpnb1	100	96.804	ENSHBUG00000016826	kpnb1	100	96.804	Haplochromis_burtoni
ENSDARG00000104889	kpnb1	100	92.694	ENSHGLG00000014138	KPNB1	100	92.694	Heterocephalus_glaber_female
ENSDARG00000104889	kpnb1	96	92.764	ENSHGLG00100006572	KPNB1	100	92.764	Heterocephalus_glaber_male
ENSDARG00000104889	kpnb1	100	93.493	ENSHCOG00000002084	kpnb1	100	93.493	Hippocampus_comes
ENSDARG00000104889	kpnb1	99	93.163	ENSIPUG00000012402	kpnb1	95	93.163	Ictalurus_punctatus
ENSDARG00000104889	kpnb1	100	92.466	ENSSTOG00000007896	KPNB1	100	92.466	Ictidomys_tridecemlineatus
ENSDARG00000104889	kpnb1	100	92.237	ENSJJAG00000010909	Kpnb1	100	92.237	Jaculus_jaculus
ENSDARG00000104889	kpnb1	100	95.662	ENSKMAG00000001547	kpnb1	100	95.662	Kryptolebias_marmoratus
ENSDARG00000104889	kpnb1	99	96.194	ENSLBEG00000025794	kpnb1	99	94.269	Labrus_bergylta
ENSDARG00000104889	kpnb1	88	92.477	ENSLACG00000017620	KPNB1	99	92.477	Latimeria_chalumnae
ENSDARG00000104889	kpnb1	100	96.804	ENSLOCG00000013753	kpnb1	100	96.804	Lepisosteus_oculatus
ENSDARG00000104889	kpnb1	100	88.014	ENSLAFG00000001328	KPNB1	100	88.014	Loxodonta_africana
ENSDARG00000104889	kpnb1	99	89.691	ENSMFAG00000030197	KPNB1	100	92.171	Macaca_fascicularis
ENSDARG00000104889	kpnb1	99	90.629	ENSMMUG00000019760	KPNB1	99	90.629	Macaca_mulatta
ENSDARG00000104889	kpnb1	100	92.123	ENSMNEG00000040927	KPNB1	100	92.123	Macaca_nemestrina
ENSDARG00000104889	kpnb1	100	89.726	ENSMLEG00000038185	KPNB1	99	89.726	Mandrillus_leucophaeus
ENSDARG00000104889	kpnb1	100	97.032	ENSMAMG00000011036	kpnb1	100	97.032	Mastacembelus_armatus
ENSDARG00000104889	kpnb1	100	96.804	ENSMZEG00005004564	kpnb1	100	96.804	Maylandia_zebra
ENSDARG00000104889	kpnb1	55	92.133	ENSMGAG00000002770	-	100	92.133	Meleagris_gallopavo
ENSDARG00000104889	kpnb1	100	92.352	ENSMAUG00000006211	Kpnb1	100	92.352	Mesocricetus_auratus
ENSDARG00000104889	kpnb1	100	92.466	ENSMICG00000012059	KPNB1	84	92.466	Microcebus_murinus
ENSDARG00000104889	kpnb1	100	92.352	ENSMOCG00000003683	Kpnb1	100	92.352	Microtus_ochrogaster
ENSDARG00000104889	kpnb1	100	92.922	ENSMODG00000012505	KPNB1	100	92.922	Monodelphis_domestica
ENSDARG00000104889	kpnb1	100	97.032	ENSMALG00000000863	kpnb1	100	97.032	Monopterus_albus
ENSDARG00000104889	kpnb1	94	92.944	MGP_CAROLIEiJ_G0017050	Kpnb1	100	92.944	Mus_caroli
ENSDARG00000104889	kpnb1	100	92.237	ENSMUSG00000001440	Kpnb1	100	92.237	Mus_musculus
ENSDARG00000104889	kpnb1	100	91.562	ENSMPUG00000015220	KPNB1	100	91.562	Mustela_putorius_furo
ENSDARG00000104889	kpnb1	100	87.585	ENSMLUG00000014522	KPNB1	100	87.585	Myotis_lucifugus
ENSDARG00000104889	kpnb1	96	92.408	ENSNGAG00000017610	Kpnb1	100	92.408	Nannospalax_galili
ENSDARG00000104889	kpnb1	100	96.804	ENSNBRG00000019305	kpnb1	100	96.804	Neolamprologus_brichardi
ENSDARG00000104889	kpnb1	100	92.123	ENSNLEG00000001446	KPNB1	100	92.123	Nomascus_leucogenys
ENSDARG00000104889	kpnb1	100	87.215	ENSMEUG00000014284	KPNB1	100	87.215	Notamacropus_eugenii
ENSDARG00000104889	kpnb1	100	92.352	ENSODEG00000017287	KPNB1	100	92.352	Octodon_degus
ENSDARG00000104889	kpnb1	100	96.804	ENSONIG00000009269	kpnb1	100	96.804	Oreochromis_niloticus
ENSDARG00000104889	kpnb1	100	92.466	ENSOCUG00000015425	KPNB1	100	92.466	Oryctolagus_cuniculus
ENSDARG00000104889	kpnb1	100	96.347	ENSORLG00000019936	kpnb1	100	96.347	Oryzias_latipes
ENSDARG00000104889	kpnb1	100	96.347	ENSORLG00020021181	kpnb1	100	96.347	Oryzias_latipes_hni
ENSDARG00000104889	kpnb1	100	96.233	ENSORLG00015012177	kpnb1	100	96.233	Oryzias_latipes_hsok
ENSDARG00000104889	kpnb1	100	96.461	ENSOMEG00000021022	kpnb1	100	96.461	Oryzias_melastigma
ENSDARG00000104889	kpnb1	100	92.466	ENSOGAG00000006153	KPNB1	100	92.466	Otolemur_garnettii
ENSDARG00000104889	kpnb1	97	91.803	ENSOARG00000008469	KPNB1	99	91.803	Ovis_aries
ENSDARG00000104889	kpnb1	100	92.123	ENSPPAG00000028842	KPNB1	100	92.123	Pan_paniscus
ENSDARG00000104889	kpnb1	96	92.645	ENSPPRG00000022879	KPNB1	97	92.326	Panthera_pardus
ENSDARG00000104889	kpnb1	96	92.645	ENSPTIG00000006870	KPNB1	97	92.326	Panthera_tigris_altaica
ENSDARG00000104889	kpnb1	100	92.123	ENSPTRG00000009333	KPNB1	100	92.123	Pan_troglodytes
ENSDARG00000104889	kpnb1	100	92.123	ENSPANG00000022099	KPNB1	100	92.123	Papio_anubis
ENSDARG00000104889	kpnb1	100	96.233	ENSPKIG00000017563	kpnb1	100	96.233	Paramormyrops_kingsleyae
ENSDARG00000104889	kpnb1	96	93.001	ENSPSIG00000009775	KPNB1	100	93.001	Pelodiscus_sinensis
ENSDARG00000104889	kpnb1	100	89.624	ENSPMGG00000001041	kpnb1	93	89.624	Periophthalmus_magnuspinnatus
ENSDARG00000104889	kpnb1	100	92.352	ENSPEMG00000017783	Kpnb1	100	92.352	Peromyscus_maniculatus_bairdii
ENSDARG00000104889	kpnb1	99	84.852	ENSPMAG00000007117	kpnb1	99	84.852	Petromyzon_marinus
ENSDARG00000104889	kpnb1	100	92.808	ENSPCIG00000001034	KPNB1	100	92.808	Phascolarctos_cinereus
ENSDARG00000104889	kpnb1	100	95.776	ENSPFOG00000009014	kpnb1	100	95.776	Poecilia_formosa
ENSDARG00000104889	kpnb1	100	95.776	ENSPLAG00000010922	kpnb1	100	95.776	Poecilia_latipinna
ENSDARG00000104889	kpnb1	100	95.776	ENSPREG00000012268	kpnb1	100	95.776	Poecilia_reticulata
ENSDARG00000104889	kpnb1	100	91.667	ENSPPYG00000025935	KPNB1	100	91.667	Pongo_abelii
ENSDARG00000104889	kpnb1	75	78.000	ENSPCAG00000002526	KPNB1	78	78.000	Procavia_capensis
ENSDARG00000104889	kpnb1	100	92.466	ENSPCOG00000026259	KPNB1	100	92.466	Propithecus_coquereli
ENSDARG00000104889	kpnb1	100	92.123	ENSPVAG00000004910	KPNB1	100	92.123	Pteropus_vampyrus
ENSDARG00000104889	kpnb1	100	92.467	ENSPNYG00000017703	kpnb1	96	97.066	Pundamilia_nyererei
ENSDARG00000104889	kpnb1	99	89.462	ENSPNAG00000024047	kpnb1	98	89.462	Pygocentrus_nattereri
ENSDARG00000104889	kpnb1	100	92.237	ENSRNOG00000009275	Kpnb1	100	92.237	Rattus_norvegicus
ENSDARG00000104889	kpnb1	100	92.009	ENSRBIG00000002254	KPNB1	99	92.009	Rhinopithecus_bieti
ENSDARG00000104889	kpnb1	99	91.570	ENSRROG00000030419	KPNB1	99	91.570	Rhinopithecus_roxellana
ENSDARG00000104889	kpnb1	99	34.585	YLR347C	KAP95	99	34.585	Saccharomyces_cerevisiae
ENSDARG00000104889	kpnb1	100	92.123	ENSSBOG00000030025	KPNB1	94	92.123	Saimiri_boliviensis_boliviensis
ENSDARG00000104889	kpnb1	96	92.562	ENSSHAG00000018214	KPNB1	100	92.562	Sarcophilus_harrisii
ENSDARG00000104889	kpnb1	100	96.918	ENSSFOG00015020000	kpnb1	100	96.918	Scleropages_formosus
ENSDARG00000104889	kpnb1	100	97.260	ENSSDUG00000016218	kpnb1	100	97.260	Seriola_dumerili
ENSDARG00000104889	kpnb1	98	97.203	ENSSLDG00000021549	kpnb1	97	97.203	Seriola_lalandi_dorsalis
ENSDARG00000104889	kpnb1	100	92.352	ENSSPUG00000017799	KPNB1	100	92.352	Sphenodon_punctatus
ENSDARG00000104889	kpnb1	100	97.146	ENSSPAG00000019346	kpnb1	100	97.146	Stegastes_partitus
ENSDARG00000104889	kpnb1	100	92.580	ENSSSCG00000017514	KPNB1	100	92.580	Sus_scrofa
ENSDARG00000104889	kpnb1	96	87.426	ENSTGUG00000003387	KPNB1	100	87.426	Taeniopygia_guttata
ENSDARG00000104889	kpnb1	100	94.178	ENSTRUG00000000542	kpnb1	100	94.178	Takifugu_rubripes
ENSDARG00000104889	kpnb1	100	94.977	ENSTNIG00000006494	kpnb1	100	94.977	Tetraodon_nigroviridis
ENSDARG00000104889	kpnb1	96	92.645	ENSTTRG00000004682	KPNB1	100	92.645	Tursiops_truncatus
ENSDARG00000104889	kpnb1	100	92.580	ENSUAMG00000025344	KPNB1	99	92.580	Ursus_americanus
ENSDARG00000104889	kpnb1	98	91.395	ENSUMAG00000016471	KPNB1	98	91.395	Ursus_maritimus
ENSDARG00000104889	kpnb1	100	78.881	ENSVPAG00000003675	KPNB1	100	78.881	Vicugna_pacos
ENSDARG00000104889	kpnb1	100	92.580	ENSVVUG00000003085	KPNB1	100	92.580	Vulpes_vulpes
ENSDARG00000104889	kpnb1	100	91.553	ENSXETG00000014717	kpnb1	100	91.553	Xenopus_tropicalis
ENSDARG00000104889	kpnb1	100	95.662	ENSXMAG00000018792	kpnb1	100	95.662	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006606	protein import into nucleus	-	IEA	Process
GO:0006607	NLS-bearing protein import into nucleus	21873635.	IBA	Process
GO:0006610	ribosomal protein import into nucleus	21873635.	IBA	Process
GO:0006886	intracellular protein transport	-	IEA	Process
GO:0008139	nuclear localization sequence binding	21873635.	IBA	Function
GO:0008536	Ran GTPase binding	-	IEA	Function
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0031965	nuclear membrane	21873635.	IBA	Component
GO:0034399	nuclear periphery	21873635.	IBA	Component