EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000104938 (Gene tree)
Gene ID: 321247
Gene Symbol: ftsj3
Alias: cb410|ftsj|sb:cb410|wu:fa08a09
Full Name: FtsJ RNA methyltransferase homolog 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 30045 bases
Position: chr22:3184500-3214544
Accession: ZDB-GENE-030131-9828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000143621	FtsJ	PF01728.19	2.9e-57	1	1
ENSDARP00000136961	FtsJ	PF01728.19	3e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000176409	-	5253	-	ENSDARP00000143621	837 (aa)	-	A0A286Y8W6
ENSDART00000160604	-	2641	-	ENSDARP00000136961	838 (aa)	-	A0A0R4IQB8

Gene Model

Click here to download ENSDARG00000104938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000104938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000104938	ftsj3	97	61.190	ENSG00000108592	FTSJ3	100	88.696	Homo_sapiens
ENSDARG00000104938	ftsj3	82	71.429	ENSAPOG00000005543	ftsj3	90	77.315	Acanthochromis_polyacanthus
ENSDARG00000104938	ftsj3	98	60.610	ENSAMEG00000003148	FTSJ3	99	61.437	Ailuropoda_melanoleuca
ENSDARG00000104938	ftsj3	88	77.000	ENSACIG00000012880	ftsj3	99	62.381	Amphilophus_citrinellus
ENSDARG00000104938	ftsj3	99	72.630	ENSAOCG00000023196	ftsj3	97	74.611	Amphiprion_ocellaris
ENSDARG00000104938	ftsj3	99	72.406	ENSAPEG00000004250	ftsj3	98	74.491	Amphiprion_percula
ENSDARG00000104938	ftsj3	91	71.114	ENSATEG00000010069	ftsj3	96	72.513	Anabas_testudineus
ENSDARG00000104938	ftsj3	90	54.768	ENSAPLG00000010362	-	99	55.371	Anas_platyrhynchos
ENSDARG00000104938	ftsj3	86	56.989	ENSACAG00000017930	FTSJ3	99	57.335	Anolis_carolinensis
ENSDARG00000104938	ftsj3	97	60.377	ENSANAG00000033774	FTSJ3	99	60.656	Aotus_nancymaae
ENSDARG00000104938	ftsj3	95	74.648	ENSACLG00000019137	ftsj3	98	82.418	Astatotilapia_calliptera
ENSDARG00000104938	ftsj3	100	72.457	ENSAMXG00000021571	ftsj3	95	75.656	Astyanax_mexicanus
ENSDARG00000104938	ftsj3	97	62.919	ENSBTAG00000021060	FTSJ3	99	63.302	Bos_taurus
ENSDARG00000104938	ftsj3	99	39.588	WBGene00019168	H06I04.3	73	40.792	Caenorhabditis_elegans
ENSDARG00000104938	ftsj3	97	60.911	ENSCJAG00000019631	FTSJ3	99	60.238	Callithrix_jacchus
ENSDARG00000104938	ftsj3	98	60.967	ENSCAFG00000012770	FTSJ3	99	60.664	Canis_familiaris
ENSDARG00000104938	ftsj3	98	61.283	ENSCAFG00020026630	FTSJ3	99	60.761	Canis_lupus_dingo
ENSDARG00000104938	ftsj3	97	63.659	ENSCHIG00000025676	FTSJ3	99	63.966	Capra_hircus
ENSDARG00000104938	ftsj3	93	57.412	ENSTSYG00000001393	FTSJ3	98	57.702	Carlito_syrichta
ENSDARG00000104938	ftsj3	65	69.744	ENSCAPG00000016654	FTSJ3	82	77.828	Cavia_aperea
ENSDARG00000104938	ftsj3	97	61.916	ENSCPOG00000011384	FTSJ3	99	61.290	Cavia_porcellus
ENSDARG00000104938	ftsj3	97	60.958	ENSCCAG00000023533	-	97	67.416	Cebus_capucinus
ENSDARG00000104938	ftsj3	97	60.095	ENSCATG00000018510	FTSJ3	99	60.071	Cercocebus_atys
ENSDARG00000104938	ftsj3	97	61.871	ENSCLAG00000003222	FTSJ3	99	62.246	Chinchilla_lanigera
ENSDARG00000104938	ftsj3	99	60.235	ENSCSAG00000003921	FTSJ3	99	60.000	Chlorocebus_sabaeus
ENSDARG00000104938	ftsj3	98	62.530	ENSCPBG00000010032	FTSJ3	98	68.539	Chrysemys_picta_bellii
ENSDARG00000104938	ftsj3	60	63.580	ENSCING00000025069	-	98	43.947	Ciona_intestinalis
ENSDARG00000104938	ftsj3	57	60.784	ENSCSAVG00000003607	-	94	59.337	Ciona_savignyi
ENSDARG00000104938	ftsj3	97	60.693	ENSCANG00000042921	FTSJ3	99	60.237	Colobus_angolensis_palliatus
ENSDARG00000104938	ftsj3	97	62.485	ENSCGRG00001018068	FTSJ3	99	61.803	Cricetulus_griseus_chok1gshd
ENSDARG00000104938	ftsj3	97	62.485	ENSCGRG00000010648	FTSJ3	99	61.803	Cricetulus_griseus_crigri
ENSDARG00000104938	ftsj3	98	70.720	ENSCSEG00000013468	ftsj3	96	71.006	Cynoglossus_semilaevis
ENSDARG00000104938	ftsj3	99	72.479	ENSCVAG00000007484	ftsj3	98	72.629	Cyprinodon_variegatus
ENSDARG00000104938	ftsj3	98	60.024	ENSDNOG00000002392	FTSJ3	99	59.529	Dasypus_novemcinctus
ENSDARG00000104938	ftsj3	97	62.169	ENSDORG00000004200	Ftsj3	99	62.024	Dipodomys_ordii
ENSDARG00000104938	ftsj3	98	42.142	FBgn0030720	CG8939	98	41.558	Drosophila_melanogaster
ENSDARG00000104938	ftsj3	99	60.422	ENSETEG00000019228	FTSJ3	99	60.638	Echinops_telfairi
ENSDARG00000104938	ftsj3	99	54.827	ENSEBUG00000007828	ftsj3	97	54.689	Eptatretus_burgeri
ENSDARG00000104938	ftsj3	98	61.882	ENSEASG00005013565	FTSJ3	93	72.406	Equus_asinus_asinus
ENSDARG00000104938	ftsj3	97	61.158	ENSECAG00000011995	FTSJ3	99	61.962	Equus_caballus
ENSDARG00000104938	ftsj3	98	71.513	ENSELUG00000013501	ftsj3	96	71.293	Esox_lucius
ENSDARG00000104938	ftsj3	98	60.667	ENSFCAG00000013983	FTSJ3	99	60.926	Felis_catus
ENSDARG00000104938	ftsj3	97	63.636	ENSFALG00000013635	FTSJ3	99	64.531	Ficedula_albicollis
ENSDARG00000104938	ftsj3	97	61.492	ENSFDAG00000010274	FTSJ3	99	61.859	Fukomys_damarensis
ENSDARG00000104938	ftsj3	99	73.950	ENSFHEG00000007639	ftsj3	98	73.709	Fundulus_heteroclitus
ENSDARG00000104938	ftsj3	51	78.719	ENSGMOG00000017184	ftsj3	100	77.803	Gadus_morhua
ENSDARG00000104938	ftsj3	97	64.192	ENSGALG00000032993	FTSJ3	99	64.516	Gallus_gallus
ENSDARG00000104938	ftsj3	51	79.907	ENSGACG00000009841	ftsj3	100	80.374	Gasterosteus_aculeatus
ENSDARG00000104938	ftsj3	98	63.842	ENSGAGG00000006236	FTSJ3	99	63.832	Gopherus_agassizii
ENSDARG00000104938	ftsj3	97	61.649	ENSGGOG00000006794	FTSJ3	99	60.808	Gorilla_gorilla
ENSDARG00000104938	ftsj3	98	74.038	ENSHBUG00000022331	ftsj3	97	73.887	Haplochromis_burtoni
ENSDARG00000104938	ftsj3	97	61.329	ENSHGLG00000012282	FTSJ3	99	61.217	Heterocephalus_glaber_female
ENSDARG00000104938	ftsj3	97	61.329	ENSHGLG00100003578	FTSJ3	99	61.217	Heterocephalus_glaber_male
ENSDARG00000104938	ftsj3	98	71.599	ENSHCOG00000018770	ftsj3	97	72.249	Hippocampus_comes
ENSDARG00000104938	ftsj3	98	74.671	ENSIPUG00000024942	ftsj3	95	74.491	Ictalurus_punctatus
ENSDARG00000104938	ftsj3	97	62.139	ENSSTOG00000021265	FTSJ3	99	61.383	Ictidomys_tridecemlineatus
ENSDARG00000104938	ftsj3	97	62.545	ENSJJAG00000012822	Ftsj3	99	62.380	Jaculus_jaculus
ENSDARG00000104938	ftsj3	99	73.127	ENSKMAG00000021997	ftsj3	99	72.727	Kryptolebias_marmoratus
ENSDARG00000104938	ftsj3	98	73.526	ENSLBEG00000027142	ftsj3	97	74.217	Labrus_bergylta
ENSDARG00000104938	ftsj3	80	48.722	ENSLACG00000005523	FTSJ3	99	48.438	Latimeria_chalumnae
ENSDARG00000104938	ftsj3	98	67.141	ENSLOCG00000008979	ftsj3	98	68.095	Lepisosteus_oculatus
ENSDARG00000104938	ftsj3	98	62.545	ENSLAFG00000003252	FTSJ3	99	62.782	Loxodonta_africana
ENSDARG00000104938	ftsj3	97	60.573	ENSMFAG00000003764	FTSJ3	99	60.261	Macaca_fascicularis
ENSDARG00000104938	ftsj3	97	60.319	ENSMMUG00000016768	FTSJ3	99	59.903	Macaca_mulatta
ENSDARG00000104938	ftsj3	97	60.523	ENSMNEG00000029254	FTSJ3	99	60.024	Macaca_nemestrina
ENSDARG00000104938	ftsj3	97	60.570	ENSMLEG00000029091	FTSJ3	99	60.380	Mandrillus_leucophaeus
ENSDARG00000104938	ftsj3	99	70.131	ENSMAMG00000006408	ftsj3	98	70.280	Mastacembelus_armatus
ENSDARG00000104938	ftsj3	98	74.101	ENSMZEG00005001992	ftsj3	97	74.368	Maylandia_zebra
ENSDARG00000104938	ftsj3	91	67.611	ENSMGAG00000000953	FTSJ3	88	67.965	Meleagris_gallopavo
ENSDARG00000104938	ftsj3	97	62.440	ENSMAUG00000015688	Ftsj3	99	62.040	Mesocricetus_auratus
ENSDARG00000104938	ftsj3	97	62.172	ENSMICG00000045996	FTSJ3	99	61.876	Microcebus_murinus
ENSDARG00000104938	ftsj3	99	61.905	ENSMOCG00000017809	Ftsj3	99	62.260	Microtus_ochrogaster
ENSDARG00000104938	ftsj3	98	71.497	ENSMMOG00000019522	ftsj3	90	72.608	Mola_mola
ENSDARG00000104938	ftsj3	99	62.648	ENSMODG00000009901	FTSJ3	99	62.411	Monodelphis_domestica
ENSDARG00000104938	ftsj3	97	62.127	MGP_CAROLIEiJ_G0017315	Ftsj3	99	61.137	Mus_caroli
ENSDARG00000104938	ftsj3	97	62.110	ENSMUSG00000020706	Ftsj3	99	61.730	Mus_musculus
ENSDARG00000104938	ftsj3	97	61.695	MGP_PahariEiJ_G0018445	Ftsj3	99	60.828	Mus_pahari
ENSDARG00000104938	ftsj3	97	62.127	MGP_SPRETEiJ_G0018159	Ftsj3	99	61.611	Mus_spretus
ENSDARG00000104938	ftsj3	98	62.246	ENSMPUG00000014911	FTSJ3	99	61.603	Mustela_putorius_furo
ENSDARG00000104938	ftsj3	98	61.071	ENSMLUG00000011667	FTSJ3	99	61.377	Myotis_lucifugus
ENSDARG00000104938	ftsj3	98	62.395	ENSNGAG00000005899	Ftsj3	99	61.814	Nannospalax_galili
ENSDARG00000104938	ftsj3	95	74.883	ENSNBRG00000017453	ftsj3	98	81.383	Neolamprologus_brichardi
ENSDARG00000104938	ftsj3	97	61.290	ENSNLEG00000004188	FTSJ3	99	60.833	Nomascus_leucogenys
ENSDARG00000104938	ftsj3	99	57.447	ENSMEUG00000013252	FTSJ3	99	58.095	Notamacropus_eugenii
ENSDARG00000104938	ftsj3	97	62.156	ENSOPRG00000014985	FTSJ3	99	61.876	Ochotona_princeps
ENSDARG00000104938	ftsj3	99	62.736	ENSODEG00000008167	FTSJ3	99	62.069	Octodon_degus
ENSDARG00000104938	ftsj3	98	74.611	ENSONIG00000001654	ftsj3	97	74.731	Oreochromis_niloticus
ENSDARG00000104938	ftsj3	99	61.013	ENSOCUG00000004319	FTSJ3	99	59.930	Oryctolagus_cuniculus
ENSDARG00000104938	ftsj3	99	71.327	ENSORLG00000005910	ftsj3	97	72.096	Oryzias_latipes
ENSDARG00000104938	ftsj3	99	71.293	ENSORLG00020021255	ftsj3	90	81.522	Oryzias_latipes_hni
ENSDARG00000104938	ftsj3	99	72.038	ENSORLG00015018416	ftsj3	97	73.293	Oryzias_latipes_hsok
ENSDARG00000104938	ftsj3	98	73.540	ENSOMEG00000014432	ftsj3	97	73.918	Oryzias_melastigma
ENSDARG00000104938	ftsj3	98	60.355	ENSOGAG00000032479	FTSJ3	99	58.769	Otolemur_garnettii
ENSDARG00000104938	ftsj3	97	63.114	ENSOARG00000013637	FTSJ3	99	62.827	Ovis_aries
ENSDARG00000104938	ftsj3	97	61.144	ENSPPAG00000027297	FTSJ3	99	60.539	Pan_paniscus
ENSDARG00000104938	ftsj3	98	60.573	ENSPPRG00000003042	FTSJ3	99	60.926	Panthera_pardus
ENSDARG00000104938	ftsj3	98	60.380	ENSPTIG00000012576	FTSJ3	99	60.710	Panthera_tigris_altaica
ENSDARG00000104938	ftsj3	97	61.071	ENSPTRG00000009524	FTSJ3	99	60.585	Pan_troglodytes
ENSDARG00000104938	ftsj3	97	60.333	ENSPANG00000020978	FTSJ3	99	60.261	Papio_anubis
ENSDARG00000104938	ftsj3	97	73.812	ENSPKIG00000012838	ftsj3	97	73.703	Paramormyrops_kingsleyae
ENSDARG00000104938	ftsj3	59	85.057	ENSPSIG00000004632	FTSJ3	69	84.848	Pelodiscus_sinensis
ENSDARG00000104938	ftsj3	99	63.976	ENSPMGG00000012959	ftsj3	99	63.394	Periophthalmus_magnuspinnatus
ENSDARG00000104938	ftsj3	97	63.216	ENSPEMG00000000248	Ftsj3	99	63.164	Peromyscus_maniculatus_bairdii
ENSDARG00000104938	ftsj3	99	60.875	ENSPCIG00000009088	FTSJ3	99	60.999	Phascolarctos_cinereus
ENSDARG00000104938	ftsj3	99	73.200	ENSPFOG00000023101	ftsj3	98	73.747	Poecilia_formosa
ENSDARG00000104938	ftsj3	99	73.554	ENSPLAG00000003846	ftsj3	98	73.747	Poecilia_latipinna
ENSDARG00000104938	ftsj3	99	73.081	ENSPMEG00000012692	ftsj3	98	73.628	Poecilia_mexicana
ENSDARG00000104938	ftsj3	99	72.098	ENSPREG00000014874	ftsj3	98	72.749	Poecilia_reticulata
ENSDARG00000104938	ftsj3	97	59.552	ENSPPYG00000008532	FTSJ3	99	60.048	Pongo_abelii
ENSDARG00000104938	ftsj3	98	60.964	ENSPCAG00000002560	FTSJ3	99	61.557	Procavia_capensis
ENSDARG00000104938	ftsj3	97	61.244	ENSPCOG00000023921	FTSJ3	99	60.443	Propithecus_coquereli
ENSDARG00000104938	ftsj3	99	60.235	ENSPVAG00000000162	FTSJ3	99	60.849	Pteropus_vampyrus
ENSDARG00000104938	ftsj3	95	75.117	ENSPNYG00000005108	ftsj3	98	81.915	Pundamilia_nyererei
ENSDARG00000104938	ftsj3	94	75.093	ENSPNAG00000022474	ftsj3	95	74.847	Pygocentrus_nattereri
ENSDARG00000104938	ftsj3	98	62.336	ENSRNOG00000009857	Ftsj3	99	62.201	Rattus_norvegicus
ENSDARG00000104938	ftsj3	97	59.976	ENSRBIG00000039259	FTSJ3	99	60.142	Rhinopithecus_bieti
ENSDARG00000104938	ftsj3	97	60.094	ENSRROG00000045002	FTSJ3	99	60.261	Rhinopithecus_roxellana
ENSDARG00000104938	ftsj3	98	36.028	YCL054W	-	99	36.605	Saccharomyces_cerevisiae
ENSDARG00000104938	ftsj3	98	61.695	ENSSBOG00000031794	FTSJ3	92	61.337	Saimiri_boliviensis_boliviensis
ENSDARG00000104938	ftsj3	99	61.321	ENSSHAG00000013062	FTSJ3	99	63.020	Sarcophilus_harrisii
ENSDARG00000104938	ftsj3	98	73.349	ENSSFOG00015018053	ftsj3	97	72.082	Scleropages_formosus
ENSDARG00000104938	ftsj3	98	74.548	ENSSMAG00000002863	ftsj3	96	74.486	Scophthalmus_maximus
ENSDARG00000104938	ftsj3	98	74.760	ENSSDUG00000003385	ftsj3	96	74.940	Seriola_dumerili
ENSDARG00000104938	ftsj3	98	75.090	ENSSLDG00000017970	ftsj3	96	74.668	Seriola_lalandi_dorsalis
ENSDARG00000104938	ftsj3	91	61.161	ENSSPUG00000012959	FTSJ3	99	60.130	Sphenodon_punctatus
ENSDARG00000104938	ftsj3	99	73.641	ENSSPAG00000002390	ftsj3	97	75.149	Stegastes_partitus
ENSDARG00000104938	ftsj3	97	60.849	ENSSSCG00000017288	FTSJ3	99	61.190	Sus_scrofa
ENSDARG00000104938	ftsj3	98	73.022	ENSTRUG00000017550	ftsj3	90	80.319	Takifugu_rubripes
ENSDARG00000104938	ftsj3	99	71.209	ENSTNIG00000015549	ftsj3	99	70.203	Tetraodon_nigroviridis
ENSDARG00000104938	ftsj3	97	58.873	ENSTBEG00000010295	FTSJ3	99	57.669	Tupaia_belangeri
ENSDARG00000104938	ftsj3	97	60.306	ENSTTRG00000006973	FTSJ3	99	61.374	Tursiops_truncatus
ENSDARG00000104938	ftsj3	80	88.060	ENSUAMG00000007332	FTSJ3	95	88.060	Ursus_americanus
ENSDARG00000104938	ftsj3	98	61.340	ENSUMAG00000017450	FTSJ3	99	61.603	Ursus_maritimus
ENSDARG00000104938	ftsj3	98	59.649	ENSVVUG00000006106	FTSJ3	99	61.356	Vulpes_vulpes
ENSDARG00000104938	ftsj3	95	57.826	ENSXETG00000006939	ftsj3	99	56.138	Xenopus_tropicalis
ENSDARG00000104938	ftsj3	98	69.002	ENSXCOG00000002999	ftsj3	97	69.194	Xiphophorus_couchianus
ENSDARG00000104938	ftsj3	98	73.150	ENSXMAG00000018139	ftsj3	97	73.389	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000453	enzyme-directed rRNA 2'-O-methylation	-	IEA	Process
GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0001510	RNA methylation	-	IEA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0008168	methyltransferase activity	-	IEA	Function
GO:0008649	rRNA methyltransferase activity	-	IEA	Function
GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity	21873635.	IBA	Function
GO:0016435	rRNA (guanine) methyltransferase activity	21873635.	IBA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component
GO:0030688	preribosome, small subunit precursor	-	IEA	Component
GO:0031167	rRNA methylation	21873635.	IBA	Process
GO:0031167	rRNA methylation	-	IEA	Process
GO:0032259	methylation	-	IEA	Process
GO:0042254	ribosome biogenesis	-	IEA	Process