EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000105137 (Gene tree)
Gene ID: 103908622
Gene Symbol: zgc:173705
Alias: -
Full Name: zgc:173705
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 10325 bases
Position: chr4:52356485-52366809
Accession: ZDB-GENE-080212-6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000139617	zf-C2H2	PF00096.26	1.5e-58	1	9
ENSDARP00000139617	zf-C2H2	PF00096.26	1.5e-58	2	9
ENSDARP00000139617	zf-C2H2	PF00096.26	1.5e-58	3	9
ENSDARP00000139617	zf-C2H2	PF00096.26	1.5e-58	4	9
ENSDARP00000139617	zf-C2H2	PF00096.26	1.5e-58	5	9
ENSDARP00000139617	zf-C2H2	PF00096.26	1.5e-58	6	9
ENSDARP00000139617	zf-C2H2	PF00096.26	1.5e-58	7	9
ENSDARP00000139617	zf-C2H2	PF00096.26	1.5e-58	8	9
ENSDARP00000139617	zf-C2H2	PF00096.26	1.5e-58	9	9
ENSDARP00000139617	zf-met	PF12874.7	2.5e-10	1	2
ENSDARP00000139617	zf-met	PF12874.7	2.5e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000170639	-	1633	-	ENSDARP00000139617	359 (aa)	-	A0A0R4IUA4

Gene Model

Click here to download ENSDARG00000105137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000105137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000105137	zgc:173705	99	67.801	ENSDARG00000096041	si:ch211-162i8.2	99	67.098
ENSDARG00000105137	zgc:173705	99	50.843	ENSDARG00000087168	si:ch211-162i8.4	98	50.843
ENSDARG00000105137	zgc:173705	99	67.470	ENSDARG00000111550	CABZ01002702.1	99	69.478
ENSDARG00000105137	zgc:173705	99	63.246	ENSDARG00000091994	znf1048	99	60.143
ENSDARG00000105137	zgc:173705	87	64.309	ENSDARG00000100653	si:dkeyp-82b4.6	98	65.595
ENSDARG00000105137	zgc:173705	99	69.890	ENSDARG00000114947	BX465848.1	99	69.890
ENSDARG00000105137	zgc:173705	99	63.910	ENSDARG00000089814	znf1042	100	61.111
ENSDARG00000105137	zgc:173705	99	59.055	ENSDARG00000098901	CABZ01002768.1	100	58.005
ENSDARG00000105137	zgc:173705	91	55.446	ENSDARG00000113626	znf976	95	55.521
ENSDARG00000105137	zgc:173705	99	67.801	ENSDARG00000102673	si:dkey-26i24.1	99	67.358
ENSDARG00000105137	zgc:173705	87	75.362	ENSDARG00000112606	BX248128.2	99	75.362
ENSDARG00000105137	zgc:173705	99	63.158	ENSDARG00000101137	znf999	99	74.038
ENSDARG00000105137	zgc:173705	99	72.695	ENSDARG00000103310	znf1053	99	72.695
ENSDARG00000105137	zgc:173705	99	67.801	ENSDARG00000094558	si:dkeyp-53e4.1	99	67.098
ENSDARG00000105137	zgc:173705	99	63.007	ENSDARG00000086449	znf1055	99	60.143
ENSDARG00000105137	zgc:173705	99	57.500	ENSDARG00000110852	znf1111	100	54.651
ENSDARG00000105137	zgc:173705	99	64.450	ENSDARG00000100961	zgc:174653	100	58.696
ENSDARG00000105137	zgc:173705	99	50.704	ENSDARG00000109255	si:ch211-234c11.2	99	50.704
ENSDARG00000105137	zgc:173705	99	59.391	ENSDARG00000098991	znf1095	98	59.391
ENSDARG00000105137	zgc:173705	99	68.820	ENSDARG00000114793	CU182823.4	98	69.944
ENSDARG00000105137	zgc:173705	99	57.053	ENSDARG00000105067	znf1043	99	62.187
ENSDARG00000105137	zgc:173705	99	61.009	ENSDARG00000091477	znf1066	100	65.352
ENSDARG00000105137	zgc:173705	99	43.094	ENSDARG00000089715	si:cabz01054394.7	94	43.094
ENSDARG00000105137	zgc:173705	99	67.617	ENSDARG00000105306	si:dkeyp-44b5.5	99	67.098
ENSDARG00000105137	zgc:173705	99	61.814	ENSDARG00000098986	znf1040	99	56.802
ENSDARG00000105137	zgc:173705	99	69.014	ENSDARG00000113808	si:dkeyp-82b4.6	96	70.141
ENSDARG00000105137	zgc:173705	100	62.302	ENSDARG00000076272	znf1041	100	68.905
ENSDARG00000105137	zgc:173705	92	62.674	ENSDARG00000116920	BX465848.2	78	61.656
ENSDARG00000105137	zgc:173705	99	67.016	ENSDARG00000100842	si:ch211-223a21.4	99	66.321
ENSDARG00000105137	zgc:173705	99	69.880	ENSDARG00000102008	si:dkey-72l17.6	99	71.268
ENSDARG00000105137	zgc:173705	99	60.112	ENSDARG00000111465	znf1104	100	57.576
ENSDARG00000105137	zgc:173705	99	47.287	ENSDARG00000074298	znf1015	100	51.261
ENSDARG00000105137	zgc:173705	99	68.063	ENSDARG00000103636	zgc:173702	99	67.617
ENSDARG00000105137	zgc:173705	99	69.061	ENSDARG00000098430	znf1078	99	69.061
ENSDARG00000105137	zgc:173705	99	51.176	ENSDARG00000074365	zgc:171901	100	62.963
ENSDARG00000105137	zgc:173705	100	96.100	ENSDARG00000100001	znf1096	100	96.100
ENSDARG00000105137	zgc:173705	98	46.667	ENSDARG00000097812	si:ch73-144d13.5	99	52.500
ENSDARG00000105137	zgc:173705	100	95.265	ENSDARG00000109381	CU457778.2	100	95.265
ENSDARG00000105137	zgc:173705	99	50.986	ENSDARG00000093041	si:ch211-234c11.2	88	50.986
ENSDARG00000105137	zgc:173705	99	68.542	ENSDARG00000104407	BX649453.1	99	67.775
ENSDARG00000105137	zgc:173705	91	67.470	ENSDARG00000095605	CR846087.3	99	67.470
ENSDARG00000105137	zgc:173705	92	79.758	ENSDARG00000103495	zgc:173714	100	79.758
ENSDARG00000105137	zgc:173705	91	60.677	ENSDARG00000116177	znf1127	92	64.607
ENSDARG00000105137	zgc:173705	99	69.014	ENSDARG00000103721	si:dkey-122c11.7	99	70.141
ENSDARG00000105137	zgc:173705	99	71.986	ENSDARG00000098270	znf1053	99	71.986
ENSDARG00000105137	zgc:173705	99	58.235	ENSDARG00000102027	si:dkey-172k15.11	96	58.235
ENSDARG00000105137	zgc:173705	99	70.248	ENSDARG00000116216	znf1046	99	68.440
ENSDARG00000105137	zgc:173705	99	55.268	ENSDARG00000088000	znf1057	99	64.375
ENSDARG00000105137	zgc:173705	99	68.508	ENSDARG00000115655	znf1078	99	68.508
ENSDARG00000105137	zgc:173705	99	69.890	ENSDARG00000098196	znf1077	99	69.890
ENSDARG00000105137	zgc:173705	99	70.112	ENSDARG00000098087	si:dkey-30f3.2	99	68.994
ENSDARG00000105137	zgc:173705	99	69.274	ENSDARG00000110658	zgc:174696	99	69.274
ENSDARG00000105137	zgc:173705	100	94.708	ENSDARG00000112725	si:dkey-22h13.2	100	94.708
ENSDARG00000105137	zgc:173705	99	60.382	ENSDARG00000096210	znf1050	99	63.246
ENSDARG00000105137	zgc:173705	92	57.864	ENSDARG00000100509	si:dkey-82i20.2	100	57.864
ENSDARG00000105137	zgc:173705	99	68.451	ENSDARG00000112103	si:dkey-16p19.1	99	69.577
ENSDARG00000105137	zgc:173705	100	95.822	ENSDARG00000115450	CABZ01012382.1	100	95.822
ENSDARG00000105137	zgc:173705	99	56.637	ENSDARG00000114396	znf1017	98	46.537
ENSDARG00000105137	zgc:173705	99	68.394	ENSDARG00000090160	zgc:173709	99	67.876
ENSDARG00000105137	zgc:173705	98	61.836	ENSDARG00000093994	znf1058	100	60.591
ENSDARG00000105137	zgc:173705	100	81.616	ENSDARG00000114437	zgc:173705	100	81.616
ENSDARG00000105137	zgc:173705	99	48.500	ENSDARG00000096856	znf1012	100	48.493
ENSDARG00000105137	zgc:173705	99	51.381	ENSDARG00000092507	znf1013	98	52.486
ENSDARG00000105137	zgc:173705	99	62.291	ENSDARG00000104074	znf1052	99	62.768
ENSDARG00000105137	zgc:173705	99	64.115	ENSDARG00000098071	znf1049	100	60.766
ENSDARG00000105137	zgc:173705	99	67.956	ENSDARG00000101327	znf1076	99	67.956
ENSDARG00000105137	zgc:173705	92	57.567	ENSDARG00000098536	si:dkey-25i10.1	100	57.567
ENSDARG00000105137	zgc:173705	99	60.734	ENSDARG00000102561	AL645691.1	97	69.209
ENSDARG00000105137	zgc:173705	99	63.962	ENSDARG00000102600	CABZ01003344.1	99	68.440
ENSDARG00000105137	zgc:173705	100	96.657	ENSDARG00000096189	si:dkey-54j5.2	100	96.657
ENSDARG00000105137	zgc:173705	99	68.848	ENSDARG00000103471	si:dkey-199m13.4	99	68.135
ENSDARG00000105137	zgc:173705	99	68.394	ENSDARG00000110229	zgc:173702	99	67.876
ENSDARG00000105137	zgc:173705	99	59.777	ENSDARG00000102791	zgc:174704	99	69.553
ENSDARG00000105137	zgc:173705	97	45.714	ENSDARG00000103244	CABZ01081752.3	93	46.429
ENSDARG00000105137	zgc:173705	99	49.728	ENSDARG00000086223	si:ch73-144d13.4	100	49.728
ENSDARG00000105137	zgc:173705	99	69.061	ENSDARG00000099736	CABZ01075078.1	99	69.061
ENSDARG00000105137	zgc:173705	99	63.007	ENSDARG00000092938	znf1047	99	58.939
ENSDARG00000105137	zgc:173705	97	45.195	ENSDARG00000102800	CABZ01081752.2	93	46.703

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000105137	zgc:173705	83	46.429	ENSFHEG00000021020	-	68	46.429	Fundulus_heteroclitus
ENSDARG00000105137	zgc:173705	76	53.846	ENSGMOG00000020024	-	100	53.846	Gadus_morhua
ENSDARG00000105137	zgc:173705	99	40.789	ENSKMAG00000011441	-	84	36.059	Kryptolebias_marmoratus
ENSDARG00000105137	zgc:173705	76	42.328	ENSKMAG00000014002	si:ch211-79k12.2	51	38.415	Kryptolebias_marmoratus
ENSDARG00000105137	zgc:173705	70	57.143	ENSNBRG00000019881	-	56	57.143	Neolamprologus_brichardi
ENSDARG00000105137	zgc:173705	99	43.077	ENSORLG00000012434	znf1064	71	36.729	Oryzias_latipes
ENSDARG00000105137	zgc:173705	98	36.842	ENSORLG00015013828	-	67	36.842	Oryzias_latipes_hsok
ENSDARG00000105137	zgc:173705	99	48.925	ENSPFOG00000022423	-	81	48.925	Poecilia_formosa
ENSDARG00000105137	zgc:173705	70	44.545	ENSPFOG00000005998	-	50	52.564	Poecilia_formosa
ENSDARG00000105137	zgc:173705	98	45.662	ENSPFOG00000003366	-	53	45.000	Poecilia_formosa
ENSDARG00000105137	zgc:173705	98	41.176	ENSPLAG00000009861	-	67	41.176	Poecilia_latipinna
ENSDARG00000105137	zgc:173705	76	41.667	ENSPLAG00000010547	-	57	39.241	Poecilia_latipinna
ENSDARG00000105137	zgc:173705	99	43.915	ENSPLAG00000023537	-	93	43.915	Poecilia_latipinna
ENSDARG00000105137	zgc:173705	89	51.613	ENSPREG00000005015	-	97	51.613	Poecilia_reticulata
ENSDARG00000105137	zgc:173705	78	49.746	ENSXETG00000031310	-	69	43.590	Xenopus_tropicalis
ENSDARG00000105137	zgc:173705	87	42.667	ENSXCOG00000003499	-	60	42.667	Xiphophorus_couchianus
ENSDARG00000105137	zgc:173705	76	45.783	ENSXCOG00000015435	-	81	45.783	Xiphophorus_couchianus
ENSDARG00000105137	zgc:173705	74	42.282	ENSXMAG00000024816	-	52	42.282	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function