EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000105157 (Gene tree)
Gene ID: -
Gene Symbol: BX649434.3
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 4649 bases
Position: chr3:18270043-18274691
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000141807	RVT_1	PF00078.27	1.9e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000161140	BX649434.3-201	4649	-	ENSDARP00000141807	1330 (aa)	-	A0A0G2LAH6

Gene Model

Click here to download ENSDARG00000105157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000105157's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000105157	BX649434.3	98	52.283	ENSDARG00000101795	CABZ01033394.1	99	52.283
ENSDARG00000105157	BX649434.3	65	30.347	ENSDARG00000099418	CABZ01030017.1	80	30.347
ENSDARG00000105157	BX649434.3	97	48.958	ENSDARG00000098779	BX547930.4	99	48.702
ENSDARG00000105157	BX649434.3	99	40.858	ENSDARG00000100303	CU638714.1	99	40.858

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000105157	BX649434.3	99	50.642	ENSATEG00000021554	-	99	50.642	Anabas_testudineus
ENSDARG00000105157	BX649434.3	79	42.395	ENSAMXG00000037575	-	97	42.395	Astyanax_mexicanus
ENSDARG00000105157	BX649434.3	97	48.607	ENSGMOG00000001470	-	99	48.684	Gadus_morhua
ENSDARG00000105157	BX649434.3	99	50.683	ENSGACG00000000122	-	99	50.683	Gasterosteus_aculeatus
ENSDARG00000105157	BX649434.3	66	50.341	ENSKMAG00000017599	-	99	50.341	Kryptolebias_marmoratus
ENSDARG00000105157	BX649434.3	76	41.298	ENSLBEG00000008569	-	98	41.298	Labrus_bergylta
ENSDARG00000105157	BX649434.3	98	39.052	ENSLBEG00000008483	-	99	39.545	Labrus_bergylta
ENSDARG00000105157	BX649434.3	98	38.993	ENSLBEG00000007872	-	99	39.456	Labrus_bergylta
ENSDARG00000105157	BX649434.3	98	39.052	ENSLBEG00000012182	-	99	39.545	Labrus_bergylta
ENSDARG00000105157	BX649434.3	57	42.283	ENSLBEG00000022930	-	93	42.283	Labrus_bergylta
ENSDARG00000105157	BX649434.3	86	50.087	ENSLBEG00000029018	-	99	50.087	Labrus_bergylta
ENSDARG00000105157	BX649434.3	75	50.252	ENSLBEG00000008622	-	99	50.252	Labrus_bergylta
ENSDARG00000105157	BX649434.3	98	39.065	ENSLBEG00000007968	-	99	39.560	Labrus_bergylta
ENSDARG00000105157	BX649434.3	97	40.323	ENSORLG00000024845	-	99	40.075	Oryzias_latipes
ENSDARG00000105157	BX649434.3	84	48.561	ENSORLG00000024114	-	99	48.561	Oryzias_latipes
ENSDARG00000105157	BX649434.3	97	40.565	ENSORLG00020022348	-	99	40.331	Oryzias_latipes_hni
ENSDARG00000105157	BX649434.3	56	30.999	ENSORLG00020013755	-	95	30.999	Oryzias_latipes_hni
ENSDARG00000105157	BX649434.3	56	31.128	ENSORLG00020013618	-	95	31.128	Oryzias_latipes_hni
ENSDARG00000105157	BX649434.3	61	30.238	ENSORLG00020007542	-	97	30.238	Oryzias_latipes_hni
ENSDARG00000105157	BX649434.3	99	37.397	ENSOMEG00000013951	-	99	37.397	Oryzias_melastigma
ENSDARG00000105157	BX649434.3	98	50.692	ENSSDUG00000006191	-	98	50.692	Seriola_dumerili
ENSDARG00000105157	BX649434.3	99	47.994	ENSXMAG00000024932	-	99	47.994	Xiphophorus_maculatus
ENSDARG00000105157	BX649434.3	99	47.994	ENSXMAG00000025449	-	99	47.994	Xiphophorus_maculatus
ENSDARG00000105157	BX649434.3	97	50.543	ENSXMAG00000028372	-	99	50.543	Xiphophorus_maculatus
ENSDARG00000105157	BX649434.3	98	47.000	ENSXMAG00000028545	-	99	47.000	Xiphophorus_maculatus