EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000105286 (Gene tree)
Gene ID: 286777
Gene Symbol: ddx54
Alias: chunp6913|mgc2835
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 12832 bases
Position: chr5:72194444-72207275
Accession: ZDB-GENE-021220-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000138094	DBP10CT	PF08147.12	4.6e-17	1	1
ENSDARP00000138094	DEAD	PF00270.29	1.4e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000165436	-	4309	-	ENSDARP00000138094	862 (aa)	-	Q8JGR2

Gene Model

Click here to download ENSDARG00000105286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000105286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000105286	ddx54	97	62.500	ENSG00000123064	DDX54	100	87.981	Homo_sapiens
ENSDARG00000105286	ddx54	98	75.059	ENSAPOG00000008602	ddx54	100	74.800	Acanthochromis_polyacanthus
ENSDARG00000105286	ddx54	99	62.500	ENSAMEG00000008775	DDX54	95	62.807	Ailuropoda_melanoleuca
ENSDARG00000105286	ddx54	100	72.374	ENSACIG00000019104	ddx54	100	72.374	Amphilophus_citrinellus
ENSDARG00000105286	ddx54	98	74.941	ENSAOCG00000008449	ddx54	100	74.943	Amphiprion_ocellaris
ENSDARG00000105286	ddx54	98	74.941	ENSAPEG00000014287	ddx54	100	74.943	Amphiprion_percula
ENSDARG00000105286	ddx54	100	74.394	ENSATEG00000018529	ddx54	100	74.394	Anabas_testudineus
ENSDARG00000105286	ddx54	95	64.677	ENSAPLG00000013191	DDX54	99	63.976	Anas_platyrhynchos
ENSDARG00000105286	ddx54	94	65.085	ENSACAG00000004703	DDX54	96	64.720	Anolis_carolinensis
ENSDARG00000105286	ddx54	99	53.401	ENSANAG00000032761	-	95	53.944	Aotus_nancymaae
ENSDARG00000105286	ddx54	90	56.147	ENSANAG00000032241	-	95	55.398	Aotus_nancymaae
ENSDARG00000105286	ddx54	100	73.241	ENSACLG00000013176	ddx54	100	73.264	Astatotilapia_calliptera
ENSDARG00000105286	ddx54	100	74.190	ENSAMXG00000009189	ddx54	100	74.074	Astyanax_mexicanus
ENSDARG00000105286	ddx54	98	62.150	ENSBTAG00000011930	DDX54	91	62.150	Bos_taurus
ENSDARG00000105286	ddx54	88	45.700	WBGene00022378	Y94H6A.5	98	44.365	Caenorhabditis_elegans
ENSDARG00000105286	ddx54	86	65.246	ENSCJAG00000010039	DDX54	80	64.940	Callithrix_jacchus
ENSDARG00000105286	ddx54	66	53.899	ENSCAFG00000009029	DDX54	99	53.899	Canis_familiaris
ENSDARG00000105286	ddx54	97	63.059	ENSCAFG00020017643	DDX54	95	63.059	Canis_lupus_dingo
ENSDARG00000105286	ddx54	98	61.085	ENSCHIG00000026798	DDX54	96	60.859	Capra_hircus
ENSDARG00000105286	ddx54	95	59.904	ENSTSYG00000007898	DDX54	94	59.639	Carlito_syrichta
ENSDARG00000105286	ddx54	95	62.652	ENSCAPG00000001482	DDX54	99	59.538	Cavia_aperea
ENSDARG00000105286	ddx54	97	61.692	ENSCPOG00000020649	DDX54	95	61.692	Cavia_porcellus
ENSDARG00000105286	ddx54	97	62.178	ENSCCAG00000022625	DDX54	95	63.201	Cebus_capucinus
ENSDARG00000105286	ddx54	97	61.404	ENSCATG00000041943	DDX54	95	62.150	Cercocebus_atys
ENSDARG00000105286	ddx54	100	61.187	ENSCLAG00000010748	DDX54	98	60.990	Chinchilla_lanigera
ENSDARG00000105286	ddx54	95	61.198	ENSCSAG00000002432	DDX54	93	60.279	Chlorocebus_sabaeus
ENSDARG00000105286	ddx54	77	64.653	ENSCPBG00000017982	DDX54	85	64.404	Chrysemys_picta_bellii
ENSDARG00000105286	ddx54	88	56.274	ENSCING00000004789	-	93	55.811	Ciona_intestinalis
ENSDARG00000105286	ddx54	91	52.698	ENSCSAVG00000008916	-	98	69.277	Ciona_savignyi
ENSDARG00000105286	ddx54	90	86.695	ENSCANG00000020637	DDX54	99	86.695	Colobus_angolensis_palliatus
ENSDARG00000105286	ddx54	100	61.670	ENSCGRG00001014803	Ddx54	97	62.369	Cricetulus_griseus_chok1gshd
ENSDARG00000105286	ddx54	100	61.530	ENSCGRG00000002827	Ddx54	97	62.225	Cricetulus_griseus_crigri
ENSDARG00000105286	ddx54	98	71.059	ENSCSEG00000016462	ddx54	100	71.230	Cynoglossus_semilaevis
ENSDARG00000105286	ddx54	100	74.856	ENSCVAG00000022404	ddx54	100	73.750	Cyprinodon_variegatus
ENSDARG00000105286	ddx54	97	63.015	ENSDNOG00000032913	DDX54	95	62.146	Dasypus_novemcinctus
ENSDARG00000105286	ddx54	82	57.525	ENSDORG00000003399	Ddx54	95	57.042	Dipodomys_ordii
ENSDARG00000105286	ddx54	91	43.378	FBgn0052344	CG32344	84	47.324	Drosophila_melanogaster
ENSDARG00000105286	ddx54	80	59.222	ENSEBUG00000008886	ddx54	95	59.736	Eptatretus_burgeri
ENSDARG00000105286	ddx54	89	60.078	ENSEASG00005009501	DDX54	100	56.914	Equus_asinus_asinus
ENSDARG00000105286	ddx54	93	69.580	ENSECAG00000012890	DDX54	95	69.580	Equus_caballus
ENSDARG00000105286	ddx54	63	86.076	ENSEEUG00000008296	-	58	86.076	Erinaceus_europaeus
ENSDARG00000105286	ddx54	100	73.523	ENSELUG00000013533	ddx54	100	72.810	Esox_lucius
ENSDARG00000105286	ddx54	97	62.941	ENSFCAG00000027806	DDX54	95	63.220	Felis_catus
ENSDARG00000105286	ddx54	92	65.461	ENSFALG00000007737	DDX54	100	64.963	Ficedula_albicollis
ENSDARG00000105286	ddx54	89	75.862	ENSFDAG00000019953	DDX54	97	74.725	Fukomys_damarensis
ENSDARG00000105286	ddx54	100	72.654	ENSFHEG00000018425	ddx54	100	72.426	Fundulus_heteroclitus
ENSDARG00000105286	ddx54	96	70.764	ENSGMOG00000011746	ddx54	96	71.393	Gadus_morhua
ENSDARG00000105286	ddx54	95	65.492	ENSGALG00000007490	DDX54	97	65.614	Gallus_gallus
ENSDARG00000105286	ddx54	100	72.042	ENSGAFG00000010336	ddx54	100	71.926	Gambusia_affinis
ENSDARG00000105286	ddx54	100	70.328	ENSGACG00000016793	ddx54	100	69.989	Gasterosteus_aculeatus
ENSDARG00000105286	ddx54	95	67.888	ENSGAGG00000022803	DDX54	100	67.201	Gopherus_agassizii
ENSDARG00000105286	ddx54	97	62.251	ENSGGOG00000010414	DDX54	95	61.665	Gorilla_gorilla
ENSDARG00000105286	ddx54	98	62.485	ENSHGLG00000014411	DDX54	98	62.514	Heterocephalus_glaber_female
ENSDARG00000105286	ddx54	98	62.441	ENSHGLG00100018511	DDX54	98	62.471	Heterocephalus_glaber_male
ENSDARG00000105286	ddx54	100	72.055	ENSHCOG00000019287	ddx54	100	72.286	Hippocampus_comes
ENSDARG00000105286	ddx54	100	71.839	ENSIPUG00000015556	Ddx54	100	72.644	Ictalurus_punctatus
ENSDARG00000105286	ddx54	89	62.897	ENSSTOG00000004068	DDX54	100	62.930	Ictidomys_tridecemlineatus
ENSDARG00000105286	ddx54	98	62.558	ENSJJAG00000015712	Ddx54	97	62.718	Jaculus_jaculus
ENSDARG00000105286	ddx54	100	73.495	ENSKMAG00000017520	ddx54	100	73.264	Kryptolebias_marmoratus
ENSDARG00000105286	ddx54	100	70.843	ENSLBEG00000019480	ddx54	100	70.957	Labrus_bergylta
ENSDARG00000105286	ddx54	96	66.628	ENSLACG00000008944	DDX54	96	66.166	Latimeria_chalumnae
ENSDARG00000105286	ddx54	100	73.064	ENSLOCG00000008485	ddx54	100	71.789	Lepisosteus_oculatus
ENSDARG00000105286	ddx54	90	53.519	ENSLAFG00000027782	DDX54	100	52.862	Loxodonta_africana
ENSDARG00000105286	ddx54	97	61.287	ENSMFAG00000043636	DDX54	95	61.637	Macaca_fascicularis
ENSDARG00000105286	ddx54	97	61.053	ENSMMUG00000021795	DDX54	95	61.404	Macaca_mulatta
ENSDARG00000105286	ddx54	97	55.322	ENSMNEG00000043605	DDX54	95	55.673	Macaca_nemestrina
ENSDARG00000105286	ddx54	97	58.431	ENSMLEG00000038981	DDX54	95	58.548	Mandrillus_leucophaeus
ENSDARG00000105286	ddx54	100	74.227	ENSMAMG00000012784	ddx54	98	75.088	Mastacembelus_armatus
ENSDARG00000105286	ddx54	100	71.875	ENSMZEG00005018773	ddx54	100	71.875	Maylandia_zebra
ENSDARG00000105286	ddx54	95	63.418	ENSMGAG00000009183	DDX54	100	63.418	Meleagris_gallopavo
ENSDARG00000105286	ddx54	98	62.587	ENSMAUG00000011051	Ddx54	97	63.287	Mesocricetus_auratus
ENSDARG00000105286	ddx54	100	62.428	ENSMICG00000012217	DDX54	96	62.894	Microcebus_murinus
ENSDARG00000105286	ddx54	100	62.572	ENSMOCG00000010835	Ddx54	97	61.905	Microtus_ochrogaster
ENSDARG00000105286	ddx54	98	72.524	ENSMMOG00000009634	ddx54	100	71.991	Mola_mola
ENSDARG00000105286	ddx54	95	64.927	ENSMODG00000003413	DDX54	97	64.294	Monodelphis_domestica
ENSDARG00000105286	ddx54	100	75.463	ENSMALG00000022098	ddx54	98	75.618	Monopterus_albus
ENSDARG00000105286	ddx54	98	62.993	MGP_CAROLIEiJ_G0027665	Ddx54	97	62.877	Mus_caroli
ENSDARG00000105286	ddx54	98	63.531	ENSMUSG00000029599	Ddx54	97	63.415	Mus_musculus
ENSDARG00000105286	ddx54	98	62.125	MGP_PahariEiJ_G0024247	Ddx54	97	62.587	Mus_pahari
ENSDARG00000105286	ddx54	98	63.152	MGP_SPRETEiJ_G0028665	Ddx54	97	63.384	Mus_spretus
ENSDARG00000105286	ddx54	97	61.927	ENSMPUG00000002574	DDX54	96	61.944	Mustela_putorius_furo
ENSDARG00000105286	ddx54	97	63.054	ENSNGAG00000021313	Ddx54	96	62.399	Nannospalax_galili
ENSDARG00000105286	ddx54	80	85.749	ENSNBRG00000005588	ddx54	79	85.749	Neolamprologus_brichardi
ENSDARG00000105286	ddx54	97	62.985	ENSNLEG00000000162	DDX54	95	62.985	Nomascus_leucogenys
ENSDARG00000105286	ddx54	81	66.667	ENSMEUG00000015392	DDX54	99	67.347	Notamacropus_eugenii
ENSDARG00000105286	ddx54	88	56.258	ENSOPRG00000012000	DDX54	86	55.832	Ochotona_princeps
ENSDARG00000105286	ddx54	98	59.953	ENSODEG00000014863	DDX54	98	59.361	Octodon_degus
ENSDARG00000105286	ddx54	98	60.764	ENSOCUG00000008932	DDX54	96	60.139	Oryctolagus_cuniculus
ENSDARG00000105286	ddx54	98	72.137	ENSORLG00000007385	ddx54	98	72.137	Oryzias_latipes
ENSDARG00000105286	ddx54	98	72.373	ENSORLG00020000858	ddx54	98	72.373	Oryzias_latipes_hni
ENSDARG00000105286	ddx54	98	72.255	ENSORLG00015006956	ddx54	98	72.255	Oryzias_latipes_hsok
ENSDARG00000105286	ddx54	98	72.835	ENSOMEG00000003663	ddx54	98	72.899	Oryzias_melastigma
ENSDARG00000105286	ddx54	97	62.867	ENSOGAG00000004210	DDX54	95	62.165	Otolemur_garnettii
ENSDARG00000105286	ddx54	98	61.877	ENSOARG00000008363	DDX54	96	61.583	Ovis_aries
ENSDARG00000105286	ddx54	97	61.538	ENSPPAG00000042178	DDX54	95	61.449	Pan_paniscus
ENSDARG00000105286	ddx54	97	61.105	ENSPPRG00000005223	DDX54	95	61.059	Panthera_pardus
ENSDARG00000105286	ddx54	62	86.316	ENSPTIG00000019728	DDX54	81	86.316	Panthera_tigris_altaica
ENSDARG00000105286	ddx54	97	61.988	ENSPTRG00000005483	DDX54	95	61.782	Pan_troglodytes
ENSDARG00000105286	ddx54	97	61.053	ENSPANG00000008883	DDX54	95	61.404	Papio_anubis
ENSDARG00000105286	ddx54	100	73.733	ENSPKIG00000018272	ddx54	98	73.963	Paramormyrops_kingsleyae
ENSDARG00000105286	ddx54	53	78.139	ENSPSIG00000005055	DDX54	95	78.139	Pelodiscus_sinensis
ENSDARG00000105286	ddx54	95	70.402	ENSPMGG00000010988	ddx54	99	69.915	Periophthalmus_magnuspinnatus
ENSDARG00000105286	ddx54	100	62.385	ENSPEMG00000016701	Ddx54	97	63.097	Peromyscus_maniculatus_bairdii
ENSDARG00000105286	ddx54	100	74.048	ENSPFOG00000019822	ddx54	100	73.727	Poecilia_formosa
ENSDARG00000105286	ddx54	100	73.933	ENSPLAG00000004530	ddx54	100	73.611	Poecilia_latipinna
ENSDARG00000105286	ddx54	100	74.048	ENSPMEG00000010803	ddx54	100	73.727	Poecilia_mexicana
ENSDARG00000105286	ddx54	100	74.130	ENSPREG00000014372	ddx54	100	74.014	Poecilia_reticulata
ENSDARG00000105286	ddx54	97	61.637	ENSPPYG00000004984	DDX54	95	61.015	Pongo_abelii
ENSDARG00000105286	ddx54	97	58.255	ENSPCAG00000008462	DDX54	95	58.255	Procavia_capensis
ENSDARG00000105286	ddx54	98	61.816	ENSPCOG00000006050	DDX54	96	61.015	Propithecus_coquereli
ENSDARG00000105286	ddx54	90	81.496	ENSPVAG00000017347	DDX54	88	81.496	Pteropus_vampyrus
ENSDARG00000105286	ddx54	100	72.005	ENSPNAG00000014459	ddx54	98	78.295	Pygocentrus_nattereri
ENSDARG00000105286	ddx54	98	63.152	ENSRNOG00000001377	Ddx54	92	62.718	Rattus_norvegicus
ENSDARG00000105286	ddx54	100	60.795	ENSRBIG00000032535	DDX54	95	61.682	Rhinopithecus_bieti
ENSDARG00000105286	ddx54	100	56.932	ENSRROG00000029557	DDX54	95	57.944	Rhinopithecus_roxellana
ENSDARG00000105286	ddx54	91	35.785	YDL031W	-	78	37.687	Saccharomyces_cerevisiae
ENSDARG00000105286	ddx54	97	61.871	ENSSBOG00000028194	DDX54	95	61.871	Saimiri_boliviensis_boliviensis
ENSDARG00000105286	ddx54	95	61.916	ENSSHAG00000015646	DDX54	99	62.743	Sarcophilus_harrisii
ENSDARG00000105286	ddx54	97	76.667	ENSSFOG00015014981	ddx54	97	75.595	Scleropages_formosus
ENSDARG00000105286	ddx54	98	71.595	ENSSMAG00000003210	ddx54	100	70.629	Scophthalmus_maximus
ENSDARG00000105286	ddx54	98	73.148	ENSSDUG00000004474	ddx54	100	73.295	Seriola_dumerili
ENSDARG00000105286	ddx54	98	72.917	ENSSLDG00000010380	ddx54	100	73.523	Seriola_lalandi_dorsalis
ENSDARG00000105286	ddx54	96	66.747	ENSSPUG00000014141	DDX54	94	65.546	Sphenodon_punctatus
ENSDARG00000105286	ddx54	93	73.815	ENSSPAG00000022918	ddx54	97	73.691	Stegastes_partitus
ENSDARG00000105286	ddx54	98	62.761	ENSSSCG00000009876	DDX54	96	62.558	Sus_scrofa
ENSDARG00000105286	ddx54	94	64.540	ENSTGUG00000009126	DDX54	100	64.540	Taeniopygia_guttata
ENSDARG00000105286	ddx54	100	72.706	ENSTRUG00000014939	ddx54	100	72.706	Takifugu_rubripes
ENSDARG00000105286	ddx54	99	70.886	ENSTNIG00000009037	ddx54	97	71.716	Tetraodon_nigroviridis
ENSDARG00000105286	ddx54	72	80.645	ENSTBEG00000003783	DDX54	76	80.645	Tupaia_belangeri
ENSDARG00000105286	ddx54	98	59.096	ENSTTRG00000016678	DDX54	96	59.281	Tursiops_truncatus
ENSDARG00000105286	ddx54	97	62.559	ENSUAMG00000028387	DDX54	99	62.039	Ursus_americanus
ENSDARG00000105286	ddx54	82	81.750	ENSUMAG00000010245	DDX54	95	82.078	Ursus_maritimus
ENSDARG00000105286	ddx54	97	63.176	ENSVVUG00000010212	DDX54	95	63.176	Vulpes_vulpes
ENSDARG00000105286	ddx54	99	62.903	ENSXETG00000016410	ddx54	98	63.593	Xenopus_tropicalis
ENSDARG00000105286	ddx54	100	72.506	ENSXCOG00000002909	ddx54	98	72.577	Xiphophorus_couchianus
ENSDARG00000105286	ddx54	100	74.130	ENSXMAG00000005312	ddx54	98	73.995	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004004	ATP-dependent RNA helicase activity	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0016787	hydrolase activity	-	IEA	Function