EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000105295 (Gene tree)
Gene ID: -
Gene Symbol: LO017784.1
Alias: -
Full Name: zinc finger protein 883-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 4112 bases
Position: chr1:58677434-58681545
Accession: 108190731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000137842	zf-C2H2	PF00096.26	2.4e-42	1	7
ENSDARP00000137842	zf-C2H2	PF00096.26	2.4e-42	2	7
ENSDARP00000137842	zf-C2H2	PF00096.26	2.4e-42	3	7
ENSDARP00000137842	zf-C2H2	PF00096.26	2.4e-42	4	7
ENSDARP00000137842	zf-C2H2	PF00096.26	2.4e-42	5	7
ENSDARP00000137842	zf-C2H2	PF00096.26	2.4e-42	6	7
ENSDARP00000137842	zf-C2H2	PF00096.26	2.4e-42	7	7
ENSDARP00000137842	zf-met	PF12874.7	0.00035	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000158488	LO017784.1-201	1796	XM_017357126	ENSDARP00000137842	530 (aa)	XP_017212615	A0A0G2KZE6

Gene Model

Click here to download ENSDARG00000105295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000105295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000105295	LO017784.1	97	44.776	ENSDARG00000104807	si:ch73-221f6.3	90	45.205
ENSDARG00000105295	LO017784.1	64	51.557	ENSDARG00000077712	zgc:113886	98	51.557
ENSDARG00000105295	LO017784.1	64	51.133	ENSDARG00000093378	si:ch211-235i11.5	84	51.133
ENSDARG00000105295	LO017784.1	77	39.130	ENSDARG00000075834	si:dkey-182i3.8	87	40.290
ENSDARG00000105295	LO017784.1	64	52.199	ENSDARG00000099890	CU207221.2	96	52.199
ENSDARG00000105295	LO017784.1	64	45.685	ENSDARG00000079760	zgc:112998	89	45.833
ENSDARG00000105295	LO017784.1	77	41.228	ENSDARG00000102959	zgc:171220	93	41.228
ENSDARG00000105295	LO017784.1	65	51.479	ENSDARG00000099731	CABZ01066719.1	96	53.333
ENSDARG00000105295	LO017784.1	64	46.519	ENSDARG00000101694	znf1184	81	46.519
ENSDARG00000105295	LO017784.1	69	43.548	ENSDARG00000071714	znf983	94	43.548
ENSDARG00000105295	LO017784.1	64	50.838	ENSDARG00000110710	CU210890.1	94	50.838
ENSDARG00000105295	LO017784.1	73	47.925	ENSDARG00000099172	BX000701.1	92	47.925
ENSDARG00000105295	LO017784.1	66	47.564	ENSDARG00000102401	znf1001	98	47.564
ENSDARG00000105295	LO017784.1	63	45.685	ENSDARG00000102282	CABZ01063298.1	88	45.685
ENSDARG00000105295	LO017784.1	77	44.444	ENSDARG00000088507	znf982	83	44.543
ENSDARG00000105295	LO017784.1	64	40.000	ENSDARG00000014775	zgc:113220	92	40.118
ENSDARG00000105295	LO017784.1	68	47.486	ENSDARG00000105074	BX000701.2	96	47.486
ENSDARG00000105295	LO017784.1	96	44.776	ENSDARG00000104904	si:ch73-221f6.1	88	44.814
ENSDARG00000105295	LO017784.1	86	38.462	ENSDARG00000095332	si:dkey-14d8.1	57	38.746
ENSDARG00000105295	LO017784.1	69	48.961	ENSDARG00000113011	zgc:113102	90	48.961
ENSDARG00000105295	LO017784.1	64	45.484	ENSDARG00000102678	znf1181	74	45.484
ENSDARG00000105295	LO017784.1	64	42.818	ENSDARG00000101562	znf1014	90	44.248
ENSDARG00000105295	LO017784.1	64	48.476	ENSDARG00000088051	AL935044.1	99	48.476
ENSDARG00000105295	LO017784.1	77	79.710	ENSDARG00000090836	si:ch211-191d2.2	88	42.353
ENSDARG00000105295	LO017784.1	64	42.773	ENSDARG00000101093	zgc:162971	80	42.773
ENSDARG00000105295	LO017784.1	86	35.967	ENSDARG00000026972	si:ch211-119o8.6	72	39.228
ENSDARG00000105295	LO017784.1	64	43.408	ENSDARG00000096528	si:ch73-236c18.9	88	45.401
ENSDARG00000105295	LO017784.1	68	51.429	ENSDARG00000100803	zgc:173517	96	51.429
ENSDARG00000105295	LO017784.1	64	49.821	ENSDARG00000103777	znf1001	100	49.821
ENSDARG00000105295	LO017784.1	73	50.440	ENSDARG00000097521	si:dkey-111k8.5	87	50.440
ENSDARG00000105295	LO017784.1	96	42.270	ENSDARG00000104783	si:ch73-221f6.4	88	44.854
ENSDARG00000105295	LO017784.1	64	51.133	ENSDARG00000100587	zgc:113886	81	51.133
ENSDARG00000105295	LO017784.1	74	47.879	ENSDARG00000103954	znf1152	92	51.931
ENSDARG00000105295	LO017784.1	64	49.263	ENSDARG00000098248	CABZ01081730.1	96	50.794
ENSDARG00000105295	LO017784.1	68	49.853	ENSDARG00000091679	FO704858.1	99	49.853
ENSDARG00000105295	LO017784.1	65	43.066	ENSDARG00000098898	si:ch211-255f4.2	99	43.094
ENSDARG00000105295	LO017784.1	64	50.633	ENSDARG00000105056	znf45l	95	50.633
ENSDARG00000105295	LO017784.1	64	46.102	ENSDARG00000108441	CU570894.1	89	46.102
ENSDARG00000105295	LO017784.1	66	47.278	ENSDARG00000115857	znf1001	98	47.278
ENSDARG00000105295	LO017784.1	64	50.407	ENSDARG00000098923	zgc:173577	94	50.407
ENSDARG00000105295	LO017784.1	64	49.020	ENSDARG00000098021	si:dkey-111k8.2	90	49.020
ENSDARG00000105295	LO017784.1	66	39.106	ENSDARG00000058562	znf991	94	39.106
ENSDARG00000105295	LO017784.1	77	48.077	ENSDARG00000097928	si:ch73-40a17.4	87	41.504

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000105295	LO017784.1	66	46.863	ENSACIG00000000360	si:ch211-241b2.1	87	46.863	Amphilophus_citrinellus
ENSDARG00000105295	LO017784.1	69	45.033	ENSACIG00000008886	znf1164	97	45.033	Amphilophus_citrinellus
ENSDARG00000105295	LO017784.1	65	43.849	ENSEBUG00000015073	-	75	43.849	Eptatretus_burgeri
ENSDARG00000105295	LO017784.1	65	45.270	ENSFHEG00000018009	-	51	45.270	Fundulus_heteroclitus
ENSDARG00000105295	LO017784.1	83	48.592	ENSMZEG00005027793	-	74	48.592	Maylandia_zebra
ENSDARG00000105295	LO017784.1	75	43.411	ENSPLAG00000016561	zgc:113348	92	43.590	Poecilia_latipinna
ENSDARG00000105295	LO017784.1	65	39.130	ENSPNYG00000024183	zgc:173577	98	39.130	Pundamilia_nyererei
ENSDARG00000105295	LO017784.1	65	43.111	ENSSPAG00000006539	-	89	43.111	Stegastes_partitus