EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000105415 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-163c2.1
Alias: -
Full Name: si:ch211-163c2.1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 261730 bases
Position: chr7:7906806-8168535
Accession: ZDB-GENE-160114-75
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000131222	PARP	PF00644.20	2.3e-26	1	1
ENSDARP00000149235	PARP	PF00644.20	3.5e-26	1	1
ENSDARP00000148429	PARP	PF00644.20	4.6e-26	1	1
ENSDARP00000142437	PARP	PF00644.20	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000190885	-	3850	-	ENSDARP00000148429	502 (aa)	-	A0A2R8Q5M8
ENSDART00000189867	-	3850	-	ENSDARP00000149235	502 (aa)	-	A0A2R8Q7Y3
ENSDART00000173008	-	3489	-	ENSDARP00000142437	1163 (aa)	-	A0A140LGQ8
ENSDART00000160836	-	1930	-	ENSDARP00000131222	502 (aa)	-	A0A0G2KFZ1

Gene Model

Click here to download ENSDARG00000105415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000105415's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000105415	si:ch211-163c2.1	62	33.038	ENSDARG00000087145	si:ch1073-296d18.1	55	33.038
ENSDARG00000105415	si:ch211-163c2.1	100	87.041	ENSDARG00000100612	si:ch211-163c2.1	84	71.107
ENSDARG00000105415	si:ch211-163c2.1	100	90.310	ENSDARG00000099377	si:cabz01030277.1	100	90.310
ENSDARG00000105415	si:ch211-163c2.1	99	31.767	ENSDARG00000040445	si:ch211-219a4.3	99	32.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000105415	si:ch211-163c2.1	58	30.165	ENSAPOG00000006513	si:ch211-219a4.3	52	30.165	Acanthochromis_polyacanthus
ENSDARG00000105415	si:ch211-163c2.1	53	45.221	ENSACIG00000020176	-	98	45.221	Amphilophus_citrinellus
ENSDARG00000105415	si:ch211-163c2.1	62	47.678	ENSAOCG00000002975	-	92	47.678	Amphiprion_ocellaris
ENSDARG00000105415	si:ch211-163c2.1	100	48.728	ENSAPEG00000003728	-	89	47.290	Amphiprion_percula
ENSDARG00000105415	si:ch211-163c2.1	99	47.544	ENSAPEG00000003700	-	85	44.700	Amphiprion_percula
ENSDARG00000105415	si:ch211-163c2.1	98	34.594	ENSAPEG00000001687	-	86	41.844	Amphiprion_percula
ENSDARG00000105415	si:ch211-163c2.1	100	50.000	ENSATEG00000002587	-	82	47.196	Anabas_testudineus
ENSDARG00000105415	si:ch211-163c2.1	100	48.733	ENSATEG00000002598	-	90	46.763	Anabas_testudineus
ENSDARG00000105415	si:ch211-163c2.1	100	49.414	ENSATEG00000002592	-	92	44.974	Anabas_testudineus
ENSDARG00000105415	si:ch211-163c2.1	98	33.269	ENSAPLG00000010062	-	57	30.496	Anas_platyrhynchos
ENSDARG00000105415	si:ch211-163c2.1	95	31.610	ENSACAG00000009741	-	99	31.818	Anolis_carolinensis
ENSDARG00000105415	si:ch211-163c2.1	84	45.540	ENSACLG00000013204	-	78	47.546	Astatotilapia_calliptera
ENSDARG00000105415	si:ch211-163c2.1	100	48.627	ENSACLG00000013116	-	91	47.950	Astatotilapia_calliptera
ENSDARG00000105415	si:ch211-163c2.1	100	45.558	ENSACLG00000013074	-	98	44.126	Astatotilapia_calliptera
ENSDARG00000105415	si:ch211-163c2.1	100	34.630	ENSACLG00000001129	-	59	31.477	Astatotilapia_calliptera
ENSDARG00000105415	si:ch211-163c2.1	99	63.158	ENSAMXG00000035876	si:cabz01030277.1	100	44.099	Astyanax_mexicanus
ENSDARG00000105415	si:ch211-163c2.1	77	40.152	ENSCVAG00000014290	-	92	42.991	Cyprinodon_variegatus
ENSDARG00000105415	si:ch211-163c2.1	100	48.228	ENSCVAG00000014299	-	87	40.147	Cyprinodon_variegatus
ENSDARG00000105415	si:ch211-163c2.1	99	35.338	ENSELUG00000007568	-	75	33.333	Esox_lucius
ENSDARG00000105415	si:ch211-163c2.1	99	32.642	ENSFHEG00000008557	-	95	31.609	Fundulus_heteroclitus
ENSDARG00000105415	si:ch211-163c2.1	100	30.402	ENSGMOG00000011231	-	84	42.282	Gadus_morhua
ENSDARG00000105415	si:ch211-163c2.1	100	31.238	ENSGAFG00000009879	si:ch211-219a4.3	98	31.373	Gambusia_affinis
ENSDARG00000105415	si:ch211-163c2.1	63	42.194	ENSGAFG00000001802	-	71	37.363	Gambusia_affinis
ENSDARG00000105415	si:ch211-163c2.1	98	34.043	ENSGAFG00000001814	-	79	31.558	Gambusia_affinis
ENSDARG00000105415	si:ch211-163c2.1	98	35.060	ENSGACG00000018943	-	73	31.717	Gasterosteus_aculeatus
ENSDARG00000105415	si:ch211-163c2.1	100	34.630	ENSHBUG00000018235	-	86	39.860	Haplochromis_burtoni
ENSDARG00000105415	si:ch211-163c2.1	100	53.175	ENSIPUG00000008165	si:cabz01030277.1	84	46.182	Ictalurus_punctatus
ENSDARG00000105415	si:ch211-163c2.1	100	32.222	ENSKMAG00000016827	-	80	30.937	Kryptolebias_marmoratus
ENSDARG00000105415	si:ch211-163c2.1	79	49.751	ENSKMAG00000000939	-	76	47.110	Kryptolebias_marmoratus
ENSDARG00000105415	si:ch211-163c2.1	100	35.645	ENSLBEG00000016023	-	74	33.152	Labrus_bergylta
ENSDARG00000105415	si:ch211-163c2.1	100	35.150	ENSLACG00000001018	-	91	33.874	Latimeria_chalumnae
ENSDARG00000105415	si:ch211-163c2.1	99	39.354	ENSLOCG00000000942	-	79	34.630	Lepisosteus_oculatus
ENSDARG00000105415	si:ch211-163c2.1	100	42.996	ENSLOCG00000000239	si:cabz01030277.1	68	39.759	Lepisosteus_oculatus
ENSDARG00000105415	si:ch211-163c2.1	100	34.381	ENSMAMG00000012368	-	64	31.105	Mastacembelus_armatus
ENSDARG00000105415	si:ch211-163c2.1	100	49.709	ENSMAMG00000014821	si:cabz01030277.1	84	41.219	Mastacembelus_armatus
ENSDARG00000105415	si:ch211-163c2.1	100	34.630	ENSMZEG00005020476	-	59	31.477	Maylandia_zebra
ENSDARG00000105415	si:ch211-163c2.1	100	48.039	ENSMZEG00005021082	-	85	42.265	Maylandia_zebra
ENSDARG00000105415	si:ch211-163c2.1	98	30.798	ENSMGAG00000016901	-	99	30.798	Meleagris_gallopavo
ENSDARG00000105415	si:ch211-163c2.1	93	48.008	ENSMALG00000015864	-	99	48.319	Monopterus_albus
ENSDARG00000105415	si:ch211-163c2.1	100	45.669	ENSMALG00000015837	-	93	39.187	Monopterus_albus
ENSDARG00000105415	si:ch211-163c2.1	78	34.515	ENSMLUG00000027718	-	96	34.515	Myotis_lucifugus
ENSDARG00000105415	si:ch211-163c2.1	51	62.703	ENSNBRG00000004017	-	91	63.077	Neolamprologus_brichardi
ENSDARG00000105415	si:ch211-163c2.1	99	46.257	ENSONIG00000012986	-	92	43.333	Oreochromis_niloticus
ENSDARG00000105415	si:ch211-163c2.1	59	43.269	ENSONIG00000004517	-	84	39.216	Oreochromis_niloticus
ENSDARG00000105415	si:ch211-163c2.1	98	34.791	ENSONIG00000007870	-	99	34.151	Oreochromis_niloticus
ENSDARG00000105415	si:ch211-163c2.1	100	30.813	ENSORLG00000008781	-	77	31.002	Oryzias_latipes
ENSDARG00000105415	si:ch211-163c2.1	100	49.213	ENSORLG00000007845	-	82	47.027	Oryzias_latipes
ENSDARG00000105415	si:ch211-163c2.1	74	48.533	ENSORLG00000026291	-	85	47.812	Oryzias_latipes
ENSDARG00000105415	si:ch211-163c2.1	100	48.819	ENSORLG00020005938	-	78	39.614	Oryzias_latipes_hni
ENSDARG00000105415	si:ch211-163c2.1	74	48.267	ENSORLG00020005917	-	85	47.188	Oryzias_latipes_hni
ENSDARG00000105415	si:ch211-163c2.1	100	31.380	ENSORLG00015021971	si:ch211-219a4.3	99	32.039	Oryzias_latipes_hsok
ENSDARG00000105415	si:ch211-163c2.1	75	32.143	ENSOMEG00000019715	si:ch211-219a4.3	80	41.135	Oryzias_melastigma
ENSDARG00000105415	si:ch211-163c2.1	64	54.711	ENSOMEG00000016408	-	99	54.711	Oryzias_melastigma
ENSDARG00000105415	si:ch211-163c2.1	100	32.216	ENSOMEG00000022143	-	63	32.216	Oryzias_melastigma
ENSDARG00000105415	si:ch211-163c2.1	99	31.191	ENSPKIG00000004027	-	78	31.191	Paramormyrops_kingsleyae
ENSDARG00000105415	si:ch211-163c2.1	99	36.450	ENSPKIG00000022431	-	81	31.553	Paramormyrops_kingsleyae
ENSDARG00000105415	si:ch211-163c2.1	97	30.784	ENSPMGG00000007159	-	99	30.784	Periophthalmus_magnuspinnatus
ENSDARG00000105415	si:ch211-163c2.1	99	32.336	ENSPMGG00000004482	-	79	32.336	Periophthalmus_magnuspinnatus
ENSDARG00000105415	si:ch211-163c2.1	51	30.864	ENSPMAG00000002848	-	56	30.864	Petromyzon_marinus
ENSDARG00000105415	si:ch211-163c2.1	96	30.134	ENSPMAG00000009649	-	70	30.134	Petromyzon_marinus
ENSDARG00000105415	si:ch211-163c2.1	100	49.213	ENSPFOG00000005470	-	99	47.608	Poecilia_formosa
ENSDARG00000105415	si:ch211-163c2.1	77	46.212	ENSPFOG00000024351	-	88	43.417	Poecilia_formosa
ENSDARG00000105415	si:ch211-163c2.1	99	34.725	ENSPFOG00000000012	-	92	30.075	Poecilia_formosa
ENSDARG00000105415	si:ch211-163c2.1	61	44.304	ENSPFOG00000023812	-	77	38.462	Poecilia_formosa
ENSDARG00000105415	si:ch211-163c2.1	61	38.413	ENSPFOG00000021893	-	82	38.413	Poecilia_formosa
ENSDARG00000105415	si:ch211-163c2.1	77	46.212	ENSPLAG00000004367	-	90	43.417	Poecilia_latipinna
ENSDARG00000105415	si:ch211-163c2.1	100	48.228	ENSPMEG00000012524	-	92	48.425	Poecilia_mexicana
ENSDARG00000105415	si:ch211-163c2.1	77	46.212	ENSPMEG00000012541	-	90	43.417	Poecilia_mexicana
ENSDARG00000105415	si:ch211-163c2.1	99	35.104	ENSPMEG00000004328	-	84	41.844	Poecilia_mexicana
ENSDARG00000105415	si:ch211-163c2.1	79	45.792	ENSPREG00000003531	-	90	43.855	Poecilia_reticulata
ENSDARG00000105415	si:ch211-163c2.1	51	41.732	ENSPREG00000019242	-	58	43.434	Poecilia_reticulata
ENSDARG00000105415	si:ch211-163c2.1	61	52.443	ENSPREG00000003544	-	60	51.793	Poecilia_reticulata
ENSDARG00000105415	si:ch211-163c2.1	99	34.630	ENSPREG00000007508	-	55	32.836	Poecilia_reticulata
ENSDARG00000105415	si:ch211-163c2.1	100	58.674	ENSPNAG00000020642	-	100	58.674	Pygocentrus_nattereri
ENSDARG00000105415	si:ch211-163c2.1	86	41.723	ENSSFOG00015012771	-	97	42.857	Scleropages_formosus
ENSDARG00000105415	si:ch211-163c2.1	100	42.718	ENSSMAG00000007826	-	86	42.718	Scophthalmus_maximus
ENSDARG00000105415	si:ch211-163c2.1	99	33.455	ENSSDUG00000001575	-	85	39.865	Seriola_dumerili
ENSDARG00000105415	si:ch211-163c2.1	100	49.209	ENSSDUG00000007589	-	95	38.307	Seriola_dumerili
ENSDARG00000105415	si:ch211-163c2.1	100	50.881	ENSSDUG00000007576	-	89	49.721	Seriola_dumerili
ENSDARG00000105415	si:ch211-163c2.1	70	54.722	ENSSLDG00000005960	-	99	54.722	Seriola_lalandi_dorsalis
ENSDARG00000105415	si:ch211-163c2.1	99	49.016	ENSSPAG00000004771	-	90	40.110	Stegastes_partitus
ENSDARG00000105415	si:ch211-163c2.1	100	50.292	ENSSPAG00000004785	-	83	41.659	Stegastes_partitus
ENSDARG00000105415	si:ch211-163c2.1	59	36.242	ENSTRUG00000004556	-	69	36.242	Takifugu_rubripes
ENSDARG00000105415	si:ch211-163c2.1	61	43.662	ENSVPAG00000002158	PARP14	50	43.662	Vicugna_pacos
ENSDARG00000105415	si:ch211-163c2.1	99	31.569	ENSXETG00000010161	parp14.3	99	32.049	Xenopus_tropicalis
ENSDARG00000105415	si:ch211-163c2.1	100	31.499	ENSXCOG00000014707	-	95	30.512	Xiphophorus_couchianus
ENSDARG00000105415	si:ch211-163c2.1	99	34.535	ENSXMAG00000016244	-	79	30.759	Xiphophorus_maculatus
ENSDARG00000105415	si:ch211-163c2.1	78	46.096	ENSXMAG00000027110	-	84	42.857	Xiphophorus_maculatus
ENSDARG00000105415	si:ch211-163c2.1	100	49.409	ENSXMAG00000001866	-	90	48.474	Xiphophorus_maculatus
ENSDARG00000105415	si:ch211-163c2.1	63	44.304	ENSXMAG00000024189	-	77	37.912	Xiphophorus_maculatus