EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000105669 (Gene tree)
Gene ID: 562071
Gene Symbol: NFX1
Alias: MGC20369|NFX2|TEG-42|Tex42
Full Name: si:dkey-10f23.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 21507 bases
Position: chr7:41491493-41512999
Accession: ZDB-GENE-160728-101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000142738	R3H	PF01424.22	9.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000174357	NFX1-203	343	-	-	- (aa)	-	-
ENSDART00000173577	NFX1-201	3867	XM_685467	ENSDARP00000142738	1083 (aa)	XP_690559	A0A1D5NSC5
ENSDART00000173615	NFX1-204	594	-	-	- (aa)	-	-
ENSDART00000173779	NFX1-202	651	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000105669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000105669's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000105669	NFX1	100	51.311	ENSG00000086102	NFX1	100	51.086	Homo_sapiens
ENSDARG00000105669	NFX1	86	67.872	ENSAPOG00000016671	si:dkey-10f23.2	75	75.123	Acanthochromis_polyacanthus
ENSDARG00000105669	NFX1	100	51.590	ENSAMEG00000007472	NFX1	100	51.196	Ailuropoda_melanoleuca
ENSDARG00000105669	NFX1	99	60.902	ENSACIG00000021055	si:dkey-10f23.2	88	66.180	Amphilophus_citrinellus
ENSDARG00000105669	NFX1	88	66.423	ENSAOCG00000017316	si:dkey-10f23.2	81	74.450	Amphiprion_ocellaris
ENSDARG00000105669	NFX1	88	66.527	ENSAPEG00000012401	si:dkey-10f23.2	79	74.572	Amphiprion_percula
ENSDARG00000105669	NFX1	87	65.684	ENSATEG00000002080	si:dkey-10f23.2	73	74.810	Anabas_testudineus
ENSDARG00000105669	NFX1	73	65.786	ENSAPLG00000005524	NFX1	70	65.912	Anas_platyrhynchos
ENSDARG00000105669	NFX1	100	50.175	ENSACAG00000002412	NFX1	71	63.934	Anolis_carolinensis
ENSDARG00000105669	NFX1	100	51.436	ENSANAG00000001809	NFX1	70	65.438	Aotus_nancymaae
ENSDARG00000105669	NFX1	92	66.071	ENSACLG00000003795	si:dkey-10f23.2	76	76.716	Astatotilapia_calliptera
ENSDARG00000105669	NFX1	100	66.400	ENSAMXG00000006963	si:dkey-10f23.2	100	66.607	Astyanax_mexicanus
ENSDARG00000105669	NFX1	100	50.963	ENSBTAG00000012385	NFX1	70	64.930	Bos_taurus
ENSDARG00000105669	NFX1	79	38.565	WBGene00007048	nfx-1	72	41.383	Caenorhabditis_elegans
ENSDARG00000105669	NFX1	100	51.481	ENSCJAG00000008142	NFX1	70	65.438	Callithrix_jacchus
ENSDARG00000105669	NFX1	100	51.926	ENSCAFG00000001848	NFX1	100	51.459	Canis_familiaris
ENSDARG00000105669	NFX1	100	52.063	ENSCAFG00020015630	NFX1	100	51.596	Canis_lupus_dingo
ENSDARG00000105669	NFX1	100	51.096	ENSCHIG00000020037	NFX1	100	51.051	Capra_hircus
ENSDARG00000105669	NFX1	100	52.045	ENSTSYG00000004125	NFX1	100	52.132	Carlito_syrichta
ENSDARG00000105669	NFX1	78	55.217	ENSCAPG00000005611	NFX1	83	56.280	Cavia_aperea
ENSDARG00000105669	NFX1	100	51.697	ENSCCAG00000025001	NFX1	100	51.610	Cebus_capucinus
ENSDARG00000105669	NFX1	100	49.254	ENSCLAG00000002893	NFX1	72	60.364	Chinchilla_lanigera
ENSDARG00000105669	NFX1	100	52.105	ENSCSAG00000009971	NFX1	100	51.173	Chlorocebus_sabaeus
ENSDARG00000105669	NFX1	69	61.096	ENSCHOG00000009225	NFX1	69	60.915	Choloepus_hoffmanni
ENSDARG00000105669	NFX1	99	51.579	ENSCPBG00000017928	NFX1	70	67.439	Chrysemys_picta_bellii
ENSDARG00000105669	NFX1	75	45.721	ENSCING00000004746	nf-x-like	67	47.607	Ciona_intestinalis
ENSDARG00000105669	NFX1	81	43.161	ENSCSAVG00000005762	-	78	43.161	Ciona_savignyi
ENSDARG00000105669	NFX1	100	49.783	ENSCANG00000028364	NFX1	100	49.522	Colobus_angolensis_palliatus
ENSDARG00000105669	NFX1	99	47.757	ENSCGRG00001002869	Nfx1	70	60.864	Cricetulus_griseus_chok1gshd
ENSDARG00000105669	NFX1	99	50.484	ENSCGRG00000016032	Nfx1	71	64.803	Cricetulus_griseus_crigri
ENSDARG00000105669	NFX1	91	61.316	ENSCSEG00000019832	si:dkey-10f23.2	94	62.372	Cynoglossus_semilaevis
ENSDARG00000105669	NFX1	80	71.494	ENSCVAG00000010039	si:dkey-10f23.2	76	74.908	Cyprinodon_variegatus
ENSDARG00000105669	NFX1	72	62.832	ENSDNOG00000002079	NFX1	70	62.832	Dasypus_novemcinctus
ENSDARG00000105669	NFX1	75	41.816	FBgn0001978	stc	68	43.350	Drosophila_melanogaster
ENSDARG00000105669	NFX1	99	58.556	ENSETEG00000001427	NFX1	64	78.409	Echinops_telfairi
ENSDARG00000105669	NFX1	92	47.065	ENSEBUG00000006923	si:dkey-10f23.2	62	55.696	Eptatretus_burgeri
ENSDARG00000105669	NFX1	100	51.344	ENSEASG00005004230	NFX1	93	50.915	Equus_asinus_asinus
ENSDARG00000105669	NFX1	100	51.255	ENSECAG00000021305	NFX1	91	51.188	Equus_caballus
ENSDARG00000105669	NFX1	68	82.759	ENSEEUG00000001694	NFX1	64	82.759	Erinaceus_europaeus
ENSDARG00000105669	NFX1	99	60.089	ENSELUG00000007422	si:dkey-10f23.2	99	59.929	Esox_lucius
ENSDARG00000105669	NFX1	100	51.709	ENSFCAG00000007905	NFX1	100	51.404	Felis_catus
ENSDARG00000105669	NFX1	79	62.937	ENSFALG00000013143	NFX1	70	66.373	Ficedula_albicollis
ENSDARG00000105669	NFX1	100	59.730	ENSFHEG00000017330	si:dkey-10f23.2	76	73.844	Fundulus_heteroclitus
ENSDARG00000105669	NFX1	68	70.149	ENSGMOG00000006198	si:dkey-10f23.2	99	70.149	Gadus_morhua
ENSDARG00000105669	NFX1	99	52.656	ENSGALG00000043724	NFX1	70	66.078	Gallus_gallus
ENSDARG00000105669	NFX1	86	66.951	ENSGAFG00000000226	si:dkey-10f23.2	87	66.880	Gambusia_affinis
ENSDARG00000105669	NFX1	68	73.720	ENSGACG00000004560	si:dkey-10f23.2	98	73.720	Gasterosteus_aculeatus
ENSDARG00000105669	NFX1	100	51.399	ENSGGOG00000006751	NFX1	70	65.820	Gorilla_gorilla
ENSDARG00000105669	NFX1	92	66.071	ENSHBUG00000015403	si:dkey-10f23.2	76	76.716	Haplochromis_burtoni
ENSDARG00000105669	NFX1	100	51.803	ENSHGLG00000008375	NFX1	72	63.703	Heterocephalus_glaber_female
ENSDARG00000105669	NFX1	100	51.803	ENSHGLG00100016433	NFX1	72	63.703	Heterocephalus_glaber_male
ENSDARG00000105669	NFX1	78	70.130	ENSHCOG00000001235	si:dkey-10f23.2	78	73.300	Hippocampus_comes
ENSDARG00000105669	NFX1	90	70.131	ENSIPUG00000005961	si:dkey-10f23.2	90	70.737	Ictalurus_punctatus
ENSDARG00000105669	NFX1	100	51.751	ENSSTOG00000006984	NFX1	70	65.565	Ictidomys_tridecemlineatus
ENSDARG00000105669	NFX1	100	51.284	ENSJJAG00000023303	Nfx1	71	65.438	Jaculus_jaculus
ENSDARG00000105669	NFX1	92	62.812	ENSKMAG00000016306	si:dkey-10f23.2	76	73.039	Kryptolebias_marmoratus
ENSDARG00000105669	NFX1	83	66.007	ENSLBEG00000013253	si:dkey-10f23.2	74	71.324	Labrus_bergylta
ENSDARG00000105669	NFX1	99	54.671	ENSLACG00000000769	NFX1	78	69.538	Latimeria_chalumnae
ENSDARG00000105669	NFX1	98	60.254	ENSLOCG00000011211	si:dkey-10f23.2	94	73.212	Lepisosteus_oculatus
ENSDARG00000105669	NFX1	100	51.520	ENSMFAG00000038715	NFX1	100	51.260	Macaca_fascicularis
ENSDARG00000105669	NFX1	100	51.520	ENSMMUG00000043096	NFX1	100	51.260	Macaca_mulatta
ENSDARG00000105669	NFX1	100	51.520	ENSMNEG00000036057	NFX1	100	51.260	Macaca_nemestrina
ENSDARG00000105669	NFX1	100	51.520	ENSMLEG00000040882	NFX1	100	51.260	Mandrillus_leucophaeus
ENSDARG00000105669	NFX1	91	63.200	ENSMAMG00000010139	si:dkey-10f23.2	75	73.284	Mastacembelus_armatus
ENSDARG00000105669	NFX1	92	66.071	ENSMZEG00005018390	si:dkey-10f23.2	76	76.716	Maylandia_zebra
ENSDARG00000105669	NFX1	100	48.868	ENSMICG00000012124	NFX1	100	48.813	Microcebus_murinus
ENSDARG00000105669	NFX1	72	64.803	ENSMOCG00000007616	Nfx1	70	64.803	Microtus_ochrogaster
ENSDARG00000105669	NFX1	77	70.505	ENSMMOG00000004171	si:dkey-10f23.2	92	71.549	Mola_mola
ENSDARG00000105669	NFX1	100	50.702	ENSMODG00000003990	NFX1	70	65.657	Monodelphis_domestica
ENSDARG00000105669	NFX1	84	66.991	ENSMALG00000017326	si:dkey-10f23.2	99	66.812	Monopterus_albus
ENSDARG00000105669	NFX1	100	51.585	MGP_CAROLIEiJ_G0025904	Nfx1	70	65.565	Mus_caroli
ENSDARG00000105669	NFX1	100	51.144	ENSMUSG00000028423	Nfx1	73	63.030	Mus_musculus
ENSDARG00000105669	NFX1	100	51.196	MGP_PahariEiJ_G0024027	Nfx1	70	65.311	Mus_pahari
ENSDARG00000105669	NFX1	100	51.408	MGP_SPRETEiJ_G0026852	Nfx1	70	65.311	Mus_spretus
ENSDARG00000105669	NFX1	100	51.123	ENSMPUG00000004111	NFX1	70	65.311	Mustela_putorius_furo
ENSDARG00000105669	NFX1	100	50.177	ENSMLUG00000011069	NFX1	70	63.590	Myotis_lucifugus
ENSDARG00000105669	NFX1	100	51.171	ENSNGAG00000005385	Nfx1	70	65.565	Nannospalax_galili
ENSDARG00000105669	NFX1	92	65.972	ENSNBRG00000013449	si:dkey-10f23.2	87	67.351	Neolamprologus_brichardi
ENSDARG00000105669	NFX1	100	51.910	ENSNLEG00000005096	NFX1	100	51.649	Nomascus_leucogenys
ENSDARG00000105669	NFX1	73	64.803	ENSMEUG00000012002	NFX1	65	64.803	Notamacropus_eugenii
ENSDARG00000105669	NFX1	73	59.696	ENSOPRG00000009816	NFX1	75	59.696	Ochotona_princeps
ENSDARG00000105669	NFX1	100	51.565	ENSODEG00000015229	NFX1	72	64.068	Octodon_degus
ENSDARG00000105669	NFX1	90	66.938	ENSONIG00000006192	si:dkey-10f23.2	73	77.456	Oreochromis_niloticus
ENSDARG00000105669	NFX1	99	49.151	ENSOANG00000002524	NFX1	74	59.268	Ornithorhynchus_anatinus
ENSDARG00000105669	NFX1	100	48.252	ENSOCUG00000008957	NFX1	100	48.112	Oryctolagus_cuniculus
ENSDARG00000105669	NFX1	92	62.900	ENSORLG00000026662	si:dkey-10f23.2	94	62.563	Oryzias_latipes
ENSDARG00000105669	NFX1	92	62.863	ENSORLG00020000170	si:dkey-10f23.2	94	62.663	Oryzias_latipes_hni
ENSDARG00000105669	NFX1	80	69.610	ENSORLG00015008191	si:dkey-10f23.2	76	72.494	Oryzias_latipes_hsok
ENSDARG00000105669	NFX1	86	67.093	ENSOMEG00000001814	si:dkey-10f23.2	80	73.091	Oryzias_melastigma
ENSDARG00000105669	NFX1	72	63.278	ENSOGAG00000000775	NFX1	70	63.151	Otolemur_garnettii
ENSDARG00000105669	NFX1	100	50.920	ENSOARG00000009478	NFX1	70	64.803	Ovis_aries
ENSDARG00000105669	NFX1	100	51.311	ENSPPAG00000027871	NFX1	100	51.086	Pan_paniscus
ENSDARG00000105669	NFX1	100	51.534	ENSPPRG00000000665	NFX1	70	65.438	Panthera_pardus
ENSDARG00000105669	NFX1	100	51.621	ENSPTIG00000012443	NFX1	70	65.438	Panthera_tigris_altaica
ENSDARG00000105669	NFX1	100	51.311	ENSPTRG00000020858	NFX1	100	51.086	Pan_troglodytes
ENSDARG00000105669	NFX1	100	51.520	ENSPANG00000025304	NFX1	100	51.260	Papio_anubis
ENSDARG00000105669	NFX1	100	58.341	ENSPKIG00000016899	si:dkey-10f23.2	100	57.054	Paramormyrops_kingsleyae
ENSDARG00000105669	NFX1	99	51.619	ENSPSIG00000008420	NFX1	70	66.247	Pelodiscus_sinensis
ENSDARG00000105669	NFX1	100	51.587	ENSPEMG00000007625	Nfx1	71	65.565	Peromyscus_maniculatus_bairdii
ENSDARG00000105669	NFX1	72	56.946	ENSPMAG00000003556	si:dkey-10f23.2	99	56.946	Petromyzon_marinus
ENSDARG00000105669	NFX1	86	67.129	ENSPFOG00000012547	si:dkey-10f23.2	77	73.716	Poecilia_formosa
ENSDARG00000105669	NFX1	86	67.343	ENSPLAG00000010574	si:dkey-10f23.2	77	73.961	Poecilia_latipinna
ENSDARG00000105669	NFX1	86	67.236	ENSPMEG00000015322	si:dkey-10f23.2	77	73.839	Poecilia_mexicana
ENSDARG00000105669	NFX1	86	67.876	ENSPREG00000006186	si:dkey-10f23.2	87	67.405	Poecilia_reticulata
ENSDARG00000105669	NFX1	64	63.948	ENSPPYG00000019136	-	100	64.092	Pongo_abelii
ENSDARG00000105669	NFX1	66	54.646	ENSPCAG00000006913	NFX1	65	54.646	Procavia_capensis
ENSDARG00000105669	NFX1	100	51.278	ENSPCOG00000015789	NFX1	72	63.858	Propithecus_coquereli
ENSDARG00000105669	NFX1	66	60.194	ENSPVAG00000011479	NFX1	64	60.194	Pteropus_vampyrus
ENSDARG00000105669	NFX1	92	66.071	ENSPNYG00000002175	si:dkey-10f23.2	76	76.716	Pundamilia_nyererei
ENSDARG00000105669	NFX1	100	68.407	ENSPNAG00000016667	si:dkey-10f23.2	100	68.497	Pygocentrus_nattereri
ENSDARG00000105669	NFX1	100	51.627	ENSRNOG00000009015	Nfx1	70	65.565	Rattus_norvegicus
ENSDARG00000105669	NFX1	100	48.048	ENSRBIG00000036482	NFX1	100	45.873	Rhinopithecus_bieti
ENSDARG00000105669	NFX1	100	51.655	ENSRROG00000026461	NFX1	100	51.434	Rhinopithecus_roxellana
ENSDARG00000105669	NFX1	67	31.936	YNL023C	-	78	31.936	Saccharomyces_cerevisiae
ENSDARG00000105669	NFX1	100	45.812	ENSSBOG00000035261	NFX1	100	45.812	Saimiri_boliviensis_boliviensis
ENSDARG00000105669	NFX1	100	50.740	ENSSHAG00000010272	NFX1	100	50.653	Sarcophilus_harrisii
ENSDARG00000105669	NFX1	100	59.156	ENSSFOG00015019271	si:dkey-10f23.2	100	59.243	Scleropages_formosus
ENSDARG00000105669	NFX1	78	70.794	ENSSMAG00000015963	si:dkey-10f23.2	78	73.058	Scophthalmus_maximus
ENSDARG00000105669	NFX1	86	67.823	ENSSDUG00000009395	si:dkey-10f23.2	75	74.818	Seriola_dumerili
ENSDARG00000105669	NFX1	86	67.400	ENSSLDG00000023817	si:dkey-10f23.2	100	60.765	Seriola_lalandi_dorsalis
ENSDARG00000105669	NFX1	53	65.464	ENSSARG00000014320	NFX1	58	65.464	Sorex_araneus
ENSDARG00000105669	NFX1	78	72.982	ENSSPAG00000012861	si:dkey-10f23.2	75	75.550	Stegastes_partitus
ENSDARG00000105669	NFX1	100	49.169	ENSSSCG00000010994	NFX1	69	63.278	Sus_scrofa
ENSDARG00000105669	NFX1	73	59.698	ENSTGUG00000007055	NFX1	100	59.698	Taeniopygia_guttata
ENSDARG00000105669	NFX1	68	63.953	ENSTBEG00000004560	NFX1	59	62.963	Tupaia_belangeri
ENSDARG00000105669	NFX1	100	64.742	ENSTTRG00000010576	NFX1	63	64.742	Tursiops_truncatus
ENSDARG00000105669	NFX1	100	51.590	ENSUMAG00000006016	NFX1	100	51.196	Ursus_maritimus
ENSDARG00000105669	NFX1	100	52.147	ENSVVUG00000021100	NFX1	100	51.773	Vulpes_vulpes
ENSDARG00000105669	NFX1	99	53.826	ENSXETG00000014997	nfx1	99	53.562	Xenopus_tropicalis
ENSDARG00000105669	NFX1	86	65.998	ENSXMAG00000001963	si:dkey-10f23.2	87	65.720	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	21873635.	IBA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003700	DNA-binding transcription factor activity	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function