EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000105696 (Gene tree)
Gene ID: 100333857
Gene Symbol: CABZ01021433.1
Alias: -
Full Name: si:cabz01021433.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 15229 bases
Position: chr4:73241193-73256421
Accession: 100333857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000143124	zf-C2H2	PF00096.26	2e-34	1	7
ENSDARP00000143124	zf-C2H2	PF00096.26	2e-34	2	7
ENSDARP00000143124	zf-C2H2	PF00096.26	2e-34	3	7
ENSDARP00000143124	zf-C2H2	PF00096.26	2e-34	4	7
ENSDARP00000143124	zf-C2H2	PF00096.26	2e-34	5	7
ENSDARP00000143124	zf-C2H2	PF00096.26	2e-34	6	7
ENSDARP00000143124	zf-C2H2	PF00096.26	2e-34	7	7
ENSDARP00000143124	zf-met	PF12874.7	2.3e-05	1	2
ENSDARP00000143124	zf-met	PF12874.7	2.3e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000174158	CABZ01021433.1-202	4271	XM_002662150	ENSDARP00000143124	261 (aa)	XP_002662196	A0A1L1QZK1
ENSDART00000174359	CABZ01021433.1-201	911	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000105696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000105696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000105696	CABZ01021433.1	99	50.785	ENSDARG00000101137	znf999	100	48.276
ENSDARG00000105696	CABZ01021433.1	99	48.387	ENSDARG00000101365	si:cabz01021430.2	100	45.098
ENSDARG00000105696	CABZ01021433.1	99	48.969	ENSDARG00000074365	zgc:171901	99	46.277

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000105696	CABZ01021433.1	53	35.811	ENSOMEG00000005928	-	60	34.545	Oryzias_melastigma