EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSDARG00000106808 (Gene tree)
Gene ID: -
Gene Symbol: CU856622.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 3368 bases
Position: chr22:2495929-2499296
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000143754	zf-C2H2	PF00096.26	5.9e-40	1	8
ENSDARP00000143754	zf-C2H2	PF00096.26	5.9e-40	2	8
ENSDARP00000143754	zf-C2H2	PF00096.26	5.9e-40	3	8
ENSDARP00000143754	zf-C2H2	PF00096.26	5.9e-40	4	8
ENSDARP00000143754	zf-C2H2	PF00096.26	5.9e-40	5	8
ENSDARP00000143754	zf-C2H2	PF00096.26	5.9e-40	6	8
ENSDARP00000143754	zf-C2H2	PF00096.26	5.9e-40	7	8
ENSDARP00000143754	zf-C2H2	PF00096.26	5.9e-40	8	8
ENSDARP00000143754	zf-met	PF12874.7	3.3e-05	1	2
ENSDARP00000143754	zf-met	PF12874.7	3.3e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000178351	CU856622.1-201	1877	-	ENSDARP00000143754	261 (aa)	-	A0A286Y9B6

Gene Model

Click here to download ENSDARG00000106808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000106808's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000106808	CU856622.1	100	59.766	ENSDARG00000071833	znf1162	76	59.766
ENSDARG00000106808	CU856622.1	100	56.863	ENSDARG00000088507	znf982	93	56.863
ENSDARG00000106808	CU856622.1	100	44.531	ENSDARG00000014775	zgc:113220	94	46.304
ENSDARG00000106808	CU856622.1	100	57.588	ENSDARG00000099618	si:dkey-1b17.6	86	57.588
ENSDARG00000106808	CU856622.1	99	46.181	ENSDARG00000115737	AL954741.2	100	45.833
ENSDARG00000106808	CU856622.1	100	61.538	ENSDARG00000092605	znf1003	79	61.538
ENSDARG00000106808	CU856622.1	100	49.615	ENSDARG00000098613	si:dkey-15h8.16	79	49.615
ENSDARG00000106808	CU856622.1	99	45.769	ENSDARG00000100915	si:ch211-255f4.7	99	47.826
ENSDARG00000106808	CU856622.1	100	51.575	ENSDARG00000069869	zgc:113030	98	51.575
ENSDARG00000106808	CU856622.1	100	63.636	ENSDARG00000077712	zgc:113886	70	58.772
ENSDARG00000106808	CU856622.1	100	54.592	ENSDARG00000115326	znf1002	76	54.592
ENSDARG00000106808	CU856622.1	99	49.259	ENSDARG00000116814	CU570894.2	71	53.307
ENSDARG00000106808	CU856622.1	99	51.751	ENSDARG00000095704	si:dkey-4c15.13	95	51.751
ENSDARG00000106808	CU856622.1	99	59.144	ENSDARG00000088051	AL935044.1	99	59.144