EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000107486 (Gene tree)
Gene ID: 100007523
Gene Symbol: CR855320.3
Alias: -
Full Name: si:dkey-79f11.10
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 11042 bases
Position: chr1:8001435-8012476
Accession: 100007523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000143438	MMR_HSR1	PF01926.23	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000177051	CR855320.3-201	3813	XM_021475937	ENSDARP00000143438	295 (aa)	XP_021331612	A0A286Y8E8

Gene Model

Click here to download ENSDARG00000107486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000107486's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000107486	CR855320.3	98	68.942	ENSDARG00000092634	CABZ01000634.1	93	70.438
ENSDARG00000107486	CR855320.3	90	39.259	ENSDARG00000060322	zgc:153654	60	39.259
ENSDARG00000107486	CR855320.3	91	44.928	ENSDARG00000002293	si:ch211-197g15.6	60	44.928
ENSDARG00000107486	CR855320.3	91	42.857	ENSDARG00000071355	si:ch211-197g15.7	97	42.308
ENSDARG00000107486	CR855320.3	94	70.652	ENSDARG00000075791	si:dkey-79f11.5	94	69.283
ENSDARG00000107486	CR855320.3	91	40.221	ENSDARG00000092883	si:dkey-193b15.5	60	40.221
ENSDARG00000107486	CR855320.3	63	54.545	ENSDARG00000092361	si:dkey-79f11.7	79	54.545
ENSDARG00000107486	CR855320.3	100	70.261	ENSDARG00000095673	si:dkey-79f11.8	86	72.401
ENSDARG00000107486	CR855320.3	93	41.577	ENSDARG00000094984	si:ch211-197g15.8	61	41.577
ENSDARG00000107486	CR855320.3	97	53.819	ENSDARG00000029720	si:dkeyp-9d4.2	98	53.819
ENSDARG00000107486	CR855320.3	94	71.377	ENSDARG00000093857	si:dkey-79f11.10	86	71.377
ENSDARG00000107486	CR855320.3	95	42.958	ENSDARG00000071361	si:ch211-197g15.10	58	43.956
ENSDARG00000107486	CR855320.3	87	53.462	ENSDARG00000095309	si:dkey-79f11.9	94	53.462
ENSDARG00000107486	CR855320.3	91	43.956	ENSDARG00000094747	si:ch211-197g15.6	80	43.956
ENSDARG00000107486	CR855320.3	93	41.877	ENSDARG00000009673	si:ch211-197g15.6	57	41.877
ENSDARG00000107486	CR855320.3	70	41.148	ENSDARG00000015678	si:dkeyp-75b4.9	99	41.148
ENSDARG00000107486	CR855320.3	98	57.292	ENSDARG00000010729	CABZ01073795.1	94	58.456

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000107486	CR855320.3	88	35.878	ENSACIG00000004521	-	91	35.878	Amphilophus_citrinellus
ENSDARG00000107486	CR855320.3	83	40.486	ENSACIG00000004501	-	85	40.486	Amphilophus_citrinellus
ENSDARG00000107486	CR855320.3	81	35.510	ENSACIG00000015237	-	89	35.510	Amphilophus_citrinellus
ENSDARG00000107486	CR855320.3	83	40.964	ENSACIG00000004408	-	86	40.964	Amphilophus_citrinellus
ENSDARG00000107486	CR855320.3	82	40.816	ENSACIG00000004426	-	83	40.816	Amphilophus_citrinellus
ENSDARG00000107486	CR855320.3	92	40.433	ENSACIG00000015616	-	97	39.711	Amphilophus_citrinellus
ENSDARG00000107486	CR855320.3	86	43.191	ENSACIG00000000741	-	90	43.191	Amphilophus_citrinellus
ENSDARG00000107486	CR855320.3	82	41.564	ENSACIG00000004444	-	87	41.152	Amphilophus_citrinellus
ENSDARG00000107486	CR855320.3	88	40.458	ENSACIG00000015684	-	93	40.458	Amphilophus_citrinellus
ENSDARG00000107486	CR855320.3	92	40.502	ENSAOCG00000002056	-	91	40.502	Amphiprion_ocellaris
ENSDARG00000107486	CR855320.3	92	39.416	ENSAPEG00000021053	-	96	39.416	Amphiprion_percula
ENSDARG00000107486	CR855320.3	91	39.700	ENSATEG00000002869	-	95	39.700	Anabas_testudineus
ENSDARG00000107486	CR855320.3	97	40.550	ENSATEG00000002718	-	85	40.511	Anabas_testudineus
ENSDARG00000107486	CR855320.3	82	40.408	ENSACLG00000016487	-	81	40.408	Astatotilapia_calliptera
ENSDARG00000107486	CR855320.3	82	39.184	ENSACLG00000027615	-	91	39.184	Astatotilapia_calliptera
ENSDARG00000107486	CR855320.3	89	35.338	ENSACLG00000002020	-	97	35.338	Astatotilapia_calliptera
ENSDARG00000107486	CR855320.3	83	32.927	ENSACLG00000016390	-	94	32.927	Astatotilapia_calliptera
ENSDARG00000107486	CR855320.3	91	35.401	ENSACLG00000010292	-	96	35.401	Astatotilapia_calliptera
ENSDARG00000107486	CR855320.3	89	34.962	ENSACLG00000018321	-	92	34.962	Astatotilapia_calliptera
ENSDARG00000107486	CR855320.3	86	42.126	ENSAMXG00000037563	-	90	42.126	Astyanax_mexicanus
ENSDARG00000107486	CR855320.3	85	37.450	ENSCSEG00000018832	-	93	37.450	Cynoglossus_semilaevis
ENSDARG00000107486	CR855320.3	86	39.216	ENSCVAG00000023166	-	96	39.216	Cyprinodon_variegatus
ENSDARG00000107486	CR855320.3	85	35.659	ENSCVAG00000007214	-	98	35.659	Cyprinodon_variegatus
ENSDARG00000107486	CR855320.3	97	38.754	ENSCVAG00000016719	-	98	38.408	Cyprinodon_variegatus
ENSDARG00000107486	CR855320.3	61	36.364	ENSCVAG00000014640	-	84	36.364	Cyprinodon_variegatus
ENSDARG00000107486	CR855320.3	88	37.931	ENSFHEG00000018078	-	94	37.931	Fundulus_heteroclitus
ENSDARG00000107486	CR855320.3	95	39.146	ENSFHEG00000018069	-	90	38.346	Fundulus_heteroclitus
ENSDARG00000107486	CR855320.3	87	37.066	ENSFHEG00000021105	-	87	37.066	Fundulus_heteroclitus
ENSDARG00000107486	CR855320.3	75	37.500	ENSFHEG00000019992	-	75	37.500	Fundulus_heteroclitus
ENSDARG00000107486	CR855320.3	94	33.094	ENSGAFG00000019423	-	60	34.532	Gambusia_affinis
ENSDARG00000107486	CR855320.3	83	34.252	ENSGAFG00000019422	-	98	34.252	Gambusia_affinis
ENSDARG00000107486	CR855320.3	91	40.892	ENSGACG00000012556	-	86	40.892	Gasterosteus_aculeatus
ENSDARG00000107486	CR855320.3	89	41.132	ENSGACG00000001319	-	97	41.132	Gasterosteus_aculeatus
ENSDARG00000107486	CR855320.3	91	39.033	ENSGACG00000012548	-	91	39.033	Gasterosteus_aculeatus
ENSDARG00000107486	CR855320.3	83	40.081	ENSHBUG00000010945	-	91	40.081	Haplochromis_burtoni
ENSDARG00000107486	CR855320.3	92	51.471	ENSIPUG00000007632	-	78	51.471	Ictalurus_punctatus
ENSDARG00000107486	CR855320.3	88	50.385	ENSIPUG00000005624	-	96	50.385	Ictalurus_punctatus
ENSDARG00000107486	CR855320.3	66	38.191	ENSIPUG00000006725	-	98	38.191	Ictalurus_punctatus
ENSDARG00000107486	CR855320.3	92	52.920	ENSIPUG00000006852	-	85	52.920	Ictalurus_punctatus
ENSDARG00000107486	CR855320.3	84	38.956	ENSKMAG00000000369	-	91	38.956	Kryptolebias_marmoratus
ENSDARG00000107486	CR855320.3	85	42.292	ENSKMAG00000006729	-	92	42.800	Kryptolebias_marmoratus
ENSDARG00000107486	CR855320.3	84	35.743	ENSKMAG00000000325	-	89	35.743	Kryptolebias_marmoratus
ENSDARG00000107486	CR855320.3	80	46.025	ENSMAMG00000003570	-	83	46.025	Mastacembelus_armatus
ENSDARG00000107486	CR855320.3	94	36.525	ENSMAMG00000003546	-	92	36.331	Mastacembelus_armatus
ENSDARG00000107486	CR855320.3	82	42.449	ENSMZEG00005008301	-	92	42.449	Maylandia_zebra
ENSDARG00000107486	CR855320.3	89	34.717	ENSMZEG00005015498	-	93	34.717	Maylandia_zebra
ENSDARG00000107486	CR855320.3	82	42.041	ENSMZEG00005008329	-	92	42.041	Maylandia_zebra
ENSDARG00000107486	CR855320.3	87	36.398	ENSNBRG00000024253	-	91	35.531	Neolamprologus_brichardi
ENSDARG00000107486	CR855320.3	82	40.408	ENSNBRG00000022075	-	86	40.408	Neolamprologus_brichardi
ENSDARG00000107486	CR855320.3	82	40.408	ENSNBRG00000020806	-	83	40.408	Neolamprologus_brichardi
ENSDARG00000107486	CR855320.3	83	40.081	ENSNBRG00000020781	-	98	40.081	Neolamprologus_brichardi
ENSDARG00000107486	CR855320.3	82	39.592	ENSNBRG00000006414	-	82	39.592	Neolamprologus_brichardi
ENSDARG00000107486	CR855320.3	88	41.603	ENSNBRG00000006386	-	98	41.603	Neolamprologus_brichardi
ENSDARG00000107486	CR855320.3	85	37.154	ENSNBRG00000023290	-	85	37.154	Neolamprologus_brichardi
ENSDARG00000107486	CR855320.3	92	35.531	ENSNBRG00000020744	-	92	35.531	Neolamprologus_brichardi
ENSDARG00000107486	CR855320.3	82	40.408	ENSONIG00000015371	-	95	40.408	Oreochromis_niloticus
ENSDARG00000107486	CR855320.3	91	34.672	ENSONIG00000018790	-	93	36.462	Oreochromis_niloticus
ENSDARG00000107486	CR855320.3	79	40.678	ENSONIG00000017465	-	95	40.678	Oreochromis_niloticus
ENSDARG00000107486	CR855320.3	82	42.857	ENSONIG00000015167	-	94	42.857	Oreochromis_niloticus
ENSDARG00000107486	CR855320.3	82	42.857	ENSONIG00000015247	-	86	42.857	Oreochromis_niloticus
ENSDARG00000107486	CR855320.3	61	43.169	ENSONIG00000013227	-	100	43.169	Oreochromis_niloticus
ENSDARG00000107486	CR855320.3	82	43.089	ENSONIG00000012317	-	98	43.089	Oreochromis_niloticus
ENSDARG00000107486	CR855320.3	88	40.684	ENSONIG00000012319	-	99	40.684	Oreochromis_niloticus
ENSDARG00000107486	CR855320.3	81	40.833	ENSONIG00000016843	-	96	40.833	Oreochromis_niloticus
ENSDARG00000107486	CR855320.3	89	40.530	ENSPMGG00000022341	-	79	40.530	Periophthalmus_magnuspinnatus
ENSDARG00000107486	CR855320.3	87	37.597	ENSPMGG00000002695	-	98	37.597	Periophthalmus_magnuspinnatus
ENSDARG00000107486	CR855320.3	91	36.667	ENSPMGG00000004994	-	93	36.667	Periophthalmus_magnuspinnatus
ENSDARG00000107486	CR855320.3	87	37.452	ENSPMGG00000012906	-	91	38.077	Periophthalmus_magnuspinnatus
ENSDARG00000107486	CR855320.3	89	39.544	ENSPFOG00000003841	-	92	39.700	Poecilia_formosa
ENSDARG00000107486	CR855320.3	96	36.207	ENSPFOG00000015382	-	93	35.926	Poecilia_formosa
ENSDARG00000107486	CR855320.3	90	38.722	ENSPFOG00000015455	-	88	38.722	Poecilia_formosa
ENSDARG00000107486	CR855320.3	91	41.636	ENSPFOG00000003807	-	94	41.636	Poecilia_formosa
ENSDARG00000107486	CR855320.3	91	35.294	ENSPFOG00000015493	-	96	34.643	Poecilia_formosa
ENSDARG00000107486	CR855320.3	87	39.535	ENSPLAG00000018274	-	91	39.535	Poecilia_latipinna
ENSDARG00000107486	CR855320.3	85	38.492	ENSPMEG00000018626	-	88	38.492	Poecilia_mexicana
ENSDARG00000107486	CR855320.3	97	36.301	ENSPMEG00000018635	-	94	36.029	Poecilia_mexicana
ENSDARG00000107486	CR855320.3	91	39.336	ENSPREG00000005137	-	95	39.810	Poecilia_reticulata
ENSDARG00000107486	CR855320.3	88	40.590	ENSPNYG00000005478	-	94	40.590	Pundamilia_nyererei
ENSDARG00000107486	CR855320.3	89	37.970	ENSPNYG00000024019	-	89	37.970	Pundamilia_nyererei
ENSDARG00000107486	CR855320.3	85	36.220	ENSPNYG00000001584	-	88	36.220	Pundamilia_nyererei
ENSDARG00000107486	CR855320.3	91	41.637	ENSPNAG00000006327	-	68	41.637	Pygocentrus_nattereri
ENSDARG00000107486	CR855320.3	90	40.977	ENSPNAG00000009266	-	97	40.977	Pygocentrus_nattereri
ENSDARG00000107486	CR855320.3	81	39.749	ENSSDUG00000002359	-	88	39.749	Seriola_dumerili
ENSDARG00000107486	CR855320.3	89	36.742	ENSSDUG00000002417	-	98	36.742	Seriola_dumerili
ENSDARG00000107486	CR855320.3	89	42.045	ENSSLDG00000016397	-	97	42.045	Seriola_lalandi_dorsalis
ENSDARG00000107486	CR855320.3	97	36.806	ENSSLDG00000008952	-	95	38.007	Seriola_lalandi_dorsalis
ENSDARG00000107486	CR855320.3	91	42.007	ENSSPAG00000012856	-	94	42.007	Stegastes_partitus
ENSDARG00000107486	CR855320.3	82	42.683	ENSSPAG00000012915	-	92	42.683	Stegastes_partitus
ENSDARG00000107486	CR855320.3	71	36.279	ENSXCOG00000008517	-	66	36.279	Xiphophorus_couchianus
ENSDARG00000107486	CR855320.3	57	38.462	ENSXCOG00000003913	-	87	38.462	Xiphophorus_couchianus
ENSDARG00000107486	CR855320.3	64	34.197	ENSXCOG00000019639	-	74	34.197	Xiphophorus_couchianus
ENSDARG00000107486	CR855320.3	89	33.459	ENSXMAG00000009971	-	69	33.459	Xiphophorus_maculatus
ENSDARG00000107486	CR855320.3	91	35.897	ENSXMAG00000009973	-	94	35.955	Xiphophorus_maculatus
ENSDARG00000107486	CR855320.3	92	41.606	ENSXMAG00000029117	-	95	41.697	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function
GO:0006955	immune response	21873635.	IBA	Process