EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000108441 (Gene tree)
Gene ID: -
Gene Symbol: CU570894.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5258 bases
Position: chr22:2598998-2604255
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000143858	zf-C2H2	PF00096.26	1.3e-48	1	9
ENSDARP00000143858	zf-C2H2	PF00096.26	1.3e-48	2	9
ENSDARP00000143858	zf-C2H2	PF00096.26	1.3e-48	3	9
ENSDARP00000143858	zf-C2H2	PF00096.26	1.3e-48	4	9
ENSDARP00000143858	zf-C2H2	PF00096.26	1.3e-48	5	9
ENSDARP00000143858	zf-C2H2	PF00096.26	1.3e-48	6	9
ENSDARP00000143858	zf-C2H2	PF00096.26	1.3e-48	7	9
ENSDARP00000143858	zf-C2H2	PF00096.26	1.3e-48	8	9
ENSDARP00000143858	zf-C2H2	PF00096.26	1.3e-48	9	9
ENSDARP00000143858	zf-met	PF12874.7	1.2e-11	1	3
ENSDARP00000143858	zf-met	PF12874.7	1.2e-11	2	3
ENSDARP00000143858	zf-met	PF12874.7	1.2e-11	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000176665	CU570894.1-201	2709	-	ENSDARP00000143858	323 (aa)	-	A0A286Y9I8

Gene Model

Click here to download ENSDARG00000108441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000108441's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000108441	CU570894.1	100	52.000	ENSDARG00000071833	znf1162	87	56.667
ENSDARG00000108441	CU570894.1	100	48.949	ENSDARG00000104065	znf1154	96	48.949
ENSDARG00000108441	CU570894.1	87	48.205	ENSDARG00000098898	si:ch211-255f4.2	99	50.898
ENSDARG00000108441	CU570894.1	100	46.814	ENSDARG00000094736	znf1157	78	58.621
ENSDARG00000108441	CU570894.1	100	48.889	ENSDARG00000078159	zgc:175284	93	49.444
ENSDARG00000108441	CU570894.1	100	51.220	ENSDARG00000099618	si:dkey-1b17.6	99	51.220
ENSDARG00000108441	CU570894.1	100	40.909	ENSDARG00000014775	zgc:113220	86	46.667
ENSDARG00000108441	CU570894.1	89	46.102	ENSDARG00000105295	LO017784.1	64	46.102
ENSDARG00000108441	CU570894.1	96	48.896	ENSDARG00000110710	CU210890.1	96	51.943
ENSDARG00000108441	CU570894.1	99	49.281	ENSDARG00000094309	si:ch73-92e7.6	92	56.134
ENSDARG00000108441	CU570894.1	98	47.040	ENSDARG00000071714	znf983	88	50.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000108441	CU570894.1	90	41.089	ENSCSEG00000015585	-	70	45.312	Cynoglossus_semilaevis
ENSDARG00000108441	CU570894.1	87	49.206	ENSKMAG00000009563	-	87	51.282	Kryptolebias_marmoratus
ENSDARG00000108441	CU570894.1	96	41.107	ENSMZEG00005021426	-	79	42.586	Maylandia_zebra