EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000109563 (Gene tree)
Gene ID: -
Gene Symbol: CABZ01074453.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 3003 bases
Position: chrKZ116053.1:7782-10784
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000149043	LSM	PF01423.22	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000181803	CABZ01074453.1-201	258	-	ENSDARP00000149043	85 (aa)	-	A0A2R8Q4W4

Gene Model

Click here to download ENSDARG00000109563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000109563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000109563	CABZ01074453.1	99	95.294	ENSDARG00000101222	oscp1a	71	95.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000109563	CABZ01074453.1	93	72.152	ENSG00000181817	LSM10	64	72.152	Homo_sapiens
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSAMEG00000019854	LSM10	69	72.941	Ailuropoda_melanoleuca
ENSDARG00000109563	CABZ01074453.1	94	76.543	ENSACIG00000015420	oscp1a	54	76.543	Amphilophus_citrinellus
ENSDARG00000109563	CABZ01074453.1	93	73.750	ENSAOCG00000015607	LSM10	62	73.750	Amphiprion_ocellaris
ENSDARG00000109563	CABZ01074453.1	96	72.289	ENSAOCG00000015618	LSM10	69	72.289	Amphiprion_ocellaris
ENSDARG00000109563	CABZ01074453.1	96	72.289	ENSAOCG00000014654	-	69	72.289	Amphiprion_ocellaris
ENSDARG00000109563	CABZ01074453.1	96	72.289	ENSAPEG00000021845	-	69	72.289	Amphiprion_percula
ENSDARG00000109563	CABZ01074453.1	93	73.750	ENSAPEG00000021851	LSM10	62	73.750	Amphiprion_percula
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSATEG00000006310	oscp1a	63	72.941	Anabas_testudineus
ENSDARG00000109563	CABZ01074453.1	99	64.706	ENSACAG00000001231	LSM10	69	64.706	Anolis_carolinensis
ENSDARG00000109563	CABZ01074453.1	99	69.412	ENSANAG00000018759	-	69	69.412	Aotus_nancymaae
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSANAG00000031489	-	70	68.235	Aotus_nancymaae
ENSDARG00000109563	CABZ01074453.1	96	73.494	ENSACLG00000004728	oscp1a	67	73.494	Astatotilapia_calliptera
ENSDARG00000109563	CABZ01074453.1	96	83.133	ENSAMXG00000025301	oscp1a	69	83.133	Astyanax_mexicanus
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSBTAG00000024096	LSM10	70	70.588	Bos_taurus
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSCJAG00000044880	LSM10	69	70.588	Callithrix_jacchus
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSCAFG00000003382	LSM10	69	72.941	Canis_familiaris
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSCAFG00020008920	LSM10	69	72.941	Canis_lupus_dingo
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSCHIG00000009398	LSM10	70	70.588	Capra_hircus
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSCAPG00000012567	LSM10	69	72.941	Cavia_aperea
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSCPOG00000039302	LSM10	69	72.941	Cavia_porcellus
ENSDARG00000109563	CABZ01074453.1	99	69.412	ENSCCAG00000018913	-	69	69.412	Cebus_capucinus
ENSDARG00000109563	CABZ01074453.1	99	69.412	ENSCCAG00000008378	-	69	69.412	Cebus_capucinus
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSCATG00000006589	LSM10	69	68.235	Cercocebus_atys
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSCLAG00000008633	LSM10	69	70.588	Chinchilla_lanigera
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSCSAG00000000134	LSM10	69	68.235	Chlorocebus_sabaeus
ENSDARG00000109563	CABZ01074453.1	99	69.412	ENSCHOG00000008615	LSM10	68	69.412	Choloepus_hoffmanni
ENSDARG00000109563	CABZ01074453.1	98	33.735	ENSCING00000024984	-	71	33.735	Ciona_intestinalis
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSCANG00000019928	LSM10	69	68.235	Colobus_angolensis_palliatus
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSCGRG00001004317	-	70	71.765	Cricetulus_griseus_chok1gshd
ENSDARG00000109563	CABZ01074453.1	92	61.728	ENSCGRG00001022673	-	65	61.728	Cricetulus_griseus_chok1gshd
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSCGRG00000014935	-	70	71.765	Cricetulus_griseus_crigri
ENSDARG00000109563	CABZ01074453.1	92	61.728	ENSCGRG00000015514	-	65	61.728	Cricetulus_griseus_crigri
ENSDARG00000109563	CABZ01074453.1	96	73.494	ENSCSEG00000010374	oscp1a	56	73.494	Cynoglossus_semilaevis
ENSDARG00000109563	CABZ01074453.1	96	72.289	ENSCVAG00000001536	oscp1a	64	72.289	Cyprinodon_variegatus
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSDNOG00000036662	LSM10	69	71.765	Dasypus_novemcinctus
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSDORG00000007579	Lsm10	69	70.588	Dipodomys_ordii
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSETEG00000005703	LSM10	70	71.765	Echinops_telfairi
ENSDARG00000109563	CABZ01074453.1	93	56.250	ENSEBUG00000001312	oscp1a	66	56.250	Eptatretus_burgeri
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSEASG00005012194	LSM10	69	72.941	Equus_asinus_asinus
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSECAG00000005071	LSM10	69	72.941	Equus_caballus
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSEEUG00000012032	LSM10	69	71.765	Erinaceus_europaeus
ENSDARG00000109563	CABZ01074453.1	99	80.000	ENSELUG00000007452	oscp1a	70	80.000	Esox_lucius
ENSDARG00000109563	CABZ01074453.1	99	67.059	ENSFALG00000000851	LSM10	69	67.059	Ficedula_albicollis
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSFDAG00000021056	LSM10	69	71.765	Fukomys_damarensis
ENSDARG00000109563	CABZ01074453.1	88	73.684	ENSFHEG00000001058	oscp1a	66	73.684	Fundulus_heteroclitus
ENSDARG00000109563	CABZ01074453.1	98	75.000	ENSGMOG00000019832	oscp1a	71	75.000	Gadus_morhua
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSGALG00000002127	LSM10	69	72.941	Gallus_gallus
ENSDARG00000109563	CABZ01074453.1	98	61.628	ENSGAFG00000016445	oscp1a	69	61.628	Gambusia_affinis
ENSDARG00000109563	CABZ01074453.1	98	73.810	ENSGACG00000002329	oscp1a	69	73.810	Gasterosteus_aculeatus
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSGAGG00000024848	LSM10	69	72.941	Gopherus_agassizii
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSGGOG00000003556	LSM10	69	70.588	Gorilla_gorilla
ENSDARG00000109563	CABZ01074453.1	96	74.699	ENSHBUG00000001722	oscp1a	67	74.699	Haplochromis_burtoni
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSHGLG00000011625	LSM10	69	70.588	Heterocephalus_glaber_female
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSHGLG00100001769	LSM10	69	70.588	Heterocephalus_glaber_male
ENSDARG00000109563	CABZ01074453.1	95	76.829	ENSIPUG00000005808	oscp1a	71	76.829	Ictalurus_punctatus
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSSTOG00000000606	LSM10	69	72.941	Ictidomys_tridecemlineatus
ENSDARG00000109563	CABZ01074453.1	96	74.699	ENSKMAG00000012143	oscp1a	69	74.699	Kryptolebias_marmoratus
ENSDARG00000109563	CABZ01074453.1	88	71.053	ENSLBEG00000017764	oscp1a	62	71.053	Labrus_bergylta
ENSDARG00000109563	CABZ01074453.1	99	65.882	ENSLACG00000015904	LSM10	65	65.882	Latimeria_chalumnae
ENSDARG00000109563	CABZ01074453.1	100	75.294	ENSLOCG00000018277	oscp1a	69	75.294	Lepisosteus_oculatus
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSLAFG00000009600	LSM10	70	71.765	Loxodonta_africana
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSMFAG00000009115	LSM10	69	68.235	Macaca_fascicularis
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSMMUG00000017338	LSM10	69	68.235	Macaca_mulatta
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSMNEG00000020023	LSM10	69	68.235	Macaca_nemestrina
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSMLEG00000025150	LSM10	69	68.235	Mandrillus_leucophaeus
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSMAMG00000004427	oscp1a	70	72.941	Mastacembelus_armatus
ENSDARG00000109563	CABZ01074453.1	96	73.494	ENSMZEG00005026307	oscp1a	67	73.494	Maylandia_zebra
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSMGAG00000015707	LSM10	69	71.765	Meleagris_gallopavo
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSMAUG00000016624	Lsm10	70	71.765	Mesocricetus_auratus
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSMOCG00000021943	Lsm10	70	70.588	Microtus_ochrogaster
ENSDARG00000109563	CABZ01074453.1	98	76.190	ENSMMOG00000013597	oscp1a	63	76.190	Mola_mola
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSMODG00000023328	LSM10	69	72.941	Monodelphis_domestica
ENSDARG00000109563	CABZ01074453.1	75	78.125	ENSMALG00000012661	oscp1a	50	78.125	Monopterus_albus
ENSDARG00000109563	CABZ01074453.1	99	70.588	MGP_CAROLIEiJ_G0026467	Lsm10	91	70.588	Mus_caroli
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSMUSG00000050188	Lsm10	91	70.588	Mus_musculus
ENSDARG00000109563	CABZ01074453.1	99	70.588	MGP_PahariEiJ_G0028798	Lsm10	91	70.588	Mus_pahari
ENSDARG00000109563	CABZ01074453.1	99	70.588	MGP_SPRETEiJ_G0027446	Lsm10	91	70.588	Mus_spretus
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSMPUG00000018593	LSM10	69	72.941	Mustela_putorius_furo
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSMLUG00000023895	LSM10	69	72.941	Myotis_lucifugus
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSNGAG00000015011	Lsm10	69	71.765	Nannospalax_galili
ENSDARG00000109563	CABZ01074453.1	96	75.904	ENSNBRG00000014306	oscp1a	67	75.904	Neolamprologus_brichardi
ENSDARG00000109563	CABZ01074453.1	99	69.412	ENSNLEG00000033754	LSM10	69	69.412	Nomascus_leucogenys
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSMEUG00000006313	LSM10	69	72.941	Notamacropus_eugenii
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSOPRG00000001699	LSM10	69	68.235	Ochotona_princeps
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSODEG00000019161	LSM10	69	70.588	Octodon_degus
ENSDARG00000109563	CABZ01074453.1	99	74.118	ENSONIG00000020904	oscp1a	70	74.118	Oreochromis_niloticus
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSOANG00000002066	LSM10	69	72.941	Ornithorhynchus_anatinus
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSOCUG00000005333	LSM10	69	68.235	Oryctolagus_cuniculus
ENSDARG00000109563	CABZ01074453.1	96	72.289	ENSORLG00000009504	oscp1a	69	72.289	Oryzias_latipes
ENSDARG00000109563	CABZ01074453.1	96	72.289	ENSORLG00020016201	oscp1a	69	72.289	Oryzias_latipes_hni
ENSDARG00000109563	CABZ01074453.1	96	72.289	ENSORLG00015007794	oscp1a	70	72.289	Oryzias_latipes_hsok
ENSDARG00000109563	CABZ01074453.1	99	74.118	ENSOGAG00000002653	LSM10	69	74.118	Otolemur_garnettii
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSOARG00000009596	LSM10	70	70.588	Ovis_aries
ENSDARG00000109563	CABZ01074453.1	93	72.152	ENSPPAG00000023465	LSM10	64	72.152	Pan_paniscus
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSPPRG00000014619	LSM10	69	71.765	Panthera_pardus
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSPTIG00000004613	LSM10	69	71.765	Panthera_tigris_altaica
ENSDARG00000109563	CABZ01074453.1	93	72.152	ENSPTRG00000000539	LSM10	64	72.152	Pan_troglodytes
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSPANG00000023172	LSM10	69	68.235	Papio_anubis
ENSDARG00000109563	CABZ01074453.1	99	75.294	ENSPKIG00000003728	oscp1a	69	75.294	Paramormyrops_kingsleyae
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSPSIG00000000590	LSM10	69	71.765	Pelodiscus_sinensis
ENSDARG00000109563	CABZ01074453.1	91	70.130	ENSPMGG00000015718	oscp1a	100	70.130	Periophthalmus_magnuspinnatus
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSPCIG00000014865	LSM10	63	72.941	Phascolarctos_cinereus
ENSDARG00000109563	CABZ01074453.1	98	70.238	ENSPFOG00000020490	oscp1a	71	70.238	Poecilia_formosa
ENSDARG00000109563	CABZ01074453.1	98	70.238	ENSPLAG00000016537	oscp1a	64	70.238	Poecilia_latipinna
ENSDARG00000109563	CABZ01074453.1	88	71.053	ENSPMEG00000000174	oscp1a	66	71.053	Poecilia_mexicana
ENSDARG00000109563	CABZ01074453.1	92	74.359	ENSPREG00000009899	oscp1a	60	74.359	Poecilia_reticulata
ENSDARG00000109563	CABZ01074453.1	99	69.412	ENSPPYG00000001539	LSM10	69	69.412	Pongo_abelii
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSPCAG00000002520	LSM10	71	70.588	Procavia_capensis
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSPVAG00000008644	LSM10	69	70.588	Pteropus_vampyrus
ENSDARG00000109563	CABZ01074453.1	96	74.699	ENSPNYG00000003138	oscp1a	67	74.699	Pundamilia_nyererei
ENSDARG00000109563	CABZ01074453.1	94	83.951	ENSPNAG00000028829	oscp1a	68	83.951	Pygocentrus_nattereri
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSRNOG00000025716	Lsm10	70	70.588	Rattus_norvegicus
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSRBIG00000001561	LSM10	69	68.235	Rhinopithecus_bieti
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSRROG00000011414	LSM10	69	68.235	Rhinopithecus_roxellana
ENSDARG00000109563	CABZ01074453.1	99	69.412	ENSSBOG00000036413	-	69	69.412	Saimiri_boliviensis_boliviensis
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSSHAG00000018056	LSM10	69	72.941	Sarcophilus_harrisii
ENSDARG00000109563	CABZ01074453.1	100	70.588	ENSSFOG00015019954	lsm10	69	70.588	Scleropages_formosus
ENSDARG00000109563	CABZ01074453.1	93	77.500	ENSSMAG00000001297	oscp1a	68	77.500	Scophthalmus_maximus
ENSDARG00000109563	CABZ01074453.1	94	74.074	ENSSDUG00000007090	oscp1a	66	74.074	Seriola_dumerili
ENSDARG00000109563	CABZ01074453.1	94	75.309	ENSSLDG00000000800	oscp1a	67	75.309	Seriola_lalandi_dorsalis
ENSDARG00000109563	CABZ01074453.1	99	71.765	ENSSARG00000004211	LSM10	68	71.765	Sorex_araneus
ENSDARG00000109563	CABZ01074453.1	96	72.289	ENSSPAG00000009229	oscp1a	69	72.289	Stegastes_partitus
ENSDARG00000109563	CABZ01074453.1	99	70.588	ENSSSCG00000038916	LSM10	70	70.588	Sus_scrofa
ENSDARG00000109563	CABZ01074453.1	99	67.059	ENSTGUG00000001600	-	70	67.059	Taeniopygia_guttata
ENSDARG00000109563	CABZ01074453.1	99	68.235	ENSTGUG00000001602	-	70	68.235	Taeniopygia_guttata
ENSDARG00000109563	CABZ01074453.1	98	72.619	ENSTRUG00000010531	oscp1a	68	72.619	Takifugu_rubripes
ENSDARG00000109563	CABZ01074453.1	99	69.412	ENSTBEG00000016674	LSM10	69	69.412	Tupaia_belangeri
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSUAMG00000020265	LSM10	69	72.941	Ursus_americanus
ENSDARG00000109563	CABZ01074453.1	99	72.941	ENSVVUG00000023209	LSM10	69	72.941	Vulpes_vulpes
ENSDARG00000109563	CABZ01074453.1	99	69.412	ENSXETG00000027631	lsm10	70	69.412	Xenopus_tropicalis
ENSDARG00000109563	CABZ01074453.1	88	69.737	ENSXMAG00000019963	oscp1a	61	69.737	Xiphophorus_maculatus